RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 OR2B11Q5JQS5 317 aa6.2□□□□□ -1.42
BDNF-209ENST00000420794 TBC1D26Q86UD7 250 aa6.2□□□□□ -1.42
BDNF-209ENST00000420794 OR4A16Q8NH70 328 aa6.2□□□□□ -1.42
BDNF-209ENST00000420794 RPEQ96AT9 228 aa6.2□□□□□ -1.42
BDNF-209ENST00000420794 HSD17B10Q99714 261 aaKnown RBP6.2□□□□□ -1.42
BDNF-209ENST00000420794 FGF23Q9GZV9 251 aaPredicted RBP6.2□□□□□ -1.42
BDNF-209ENST00000420794 TMED3Q9Y3Q3 217 aa6.2□□□□□ -1.42
BDNF-209ENST00000420794 IGKV1D-17A0A075B6S4 117 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 TRBV6-6A0A0A6YYG2 114 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 KBTBD11-OT1A0A1B0GTJ5 212 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 RAB29O14966 203 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 SIX6O95475 246 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 IFNA17P01571 189 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 OR5AC1P0C628 307 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 KIR2DS2P43631 304 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 BTN1A1Q13410 526 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 DHRS11Q6UWP2 260 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 CLEC18BQ6UXF7 455 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 ZNF788Q6ZQV5 615 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 PERPQ96FX8 193 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 ABHD14AQ9BUJ0 271 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 RAB18Q9NP72 206 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 GFOD1Q9NXC2 390 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 PRRC2CQ9Y520 2896 aaKnown RBP6.19□□□□□ -1.42
BDNF-209ENST00000420794 C7orf66A4D0T2 115 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 BTBD17A6NE02 478 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 CCSO14618 274 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 MED6O75586 246 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 RPL23AP62750 156 aaKnown RBP6.19□□□□□ -1.42
BDNF-209ENST00000420794 TMEM95Q3KNT9 176 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 PRAMEF5Q5TYX0 476 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 EIF5AL1Q6IS14 154 aaKnown RBP6.19□□□□□ -1.42
BDNF-209ENST00000420794 PET117Q6UWS5 81 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 C11orf53Q8IXP5 236 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 DCUN1D4Q92564 292 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 SSBP3Q9BWW4 388 aaPredicted RBP6.19□□□□□ -1.42
BDNF-209ENST00000420794 HES4Q9HCC6 221 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 CACFD1Q9UGQ2 172 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 MAB21L2Q9Y586 359 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 CEACAM18A8MTB9 384 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 SCGB2A1O75556 95 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 COL8A2P25067 703 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 MECP2P51608 486 aaKnown RBP6.19□□□□□ -1.42
BDNF-209ENST00000420794 CAV2P51636 162 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 DSCR9P59020 149 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 MSMPQ1L6U9 139 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 TMEM68Q96MH6 324 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 TRAF4Q9BUZ4 470 aaPredicted RBP6.19□□□□□ -1.42
BDNF-209ENST00000420794 OR1A1Q9P1Q5 309 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 MUC3AQ02505 3323 aa6.19□□□□□ -1.42
BDNF-209ENST00000420794 TRBV6-7A0A0A0MS04 114 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 CEBPZOSA8MTT3 80 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 ARPC5O15511 151 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 ST8SIA3O43173 380 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 F12P00748 615 aaPredicted RBP6.18□□□□□ -1.42
BDNF-209ENST00000420794 HRASP01112 189 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 TFF1P04155 84 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 HES1Q14469 280 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 STUMQ69YW2 141 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 PCSK4Q6UW60 755 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 Q6ZS49 121 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 BIVMQ86UB2 503 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 ZNF546Q86UE3 836 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 ADAD2Q8NCV1 583 aaKnown RBP6.18□□□□□ -1.42
BDNF-209ENST00000420794 ABHD5Q8WTS1 349 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 MITD1Q8WV92 249 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 C2orf50Q96LR7 162 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 ARL6Q9H0F7 186 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 FCGR3BO75015 233 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 SOD3P08294 240 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 RPA2P15927 270 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 NKX2-1P43699 371 aaPredicted RBP6.18□□□□□ -1.42
BDNF-209ENST00000420794 F2RL1P55085 397 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 RPS16P62249 146 aaKnown RBP6.18□□□□□ -1.42
BDNF-209ENST00000420794 HTD2P86397 168 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 ZNF816Q0VGE8 651 aaPredicted RBP6.18□□□□□ -1.42
BDNF-209ENST00000420794 TMEM155Q4W5P6 130 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 TEX36Q5VZQ5 186 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 LIAT1Q6ZQX7 453 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 ZNF645Q8N7E2 425 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 TCTEX1D1Q8N7M0 179 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 METRNQ9UJH8 293 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 FAM96BQ9Y3D0 163 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 BORCS7-ASMTA0A0B4J1R7 106 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 A0A0B4J2A0 478 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 LOC105371267A0A1B0GV96 52 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 LPAR6P43657 344 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 THBS3P49746 956 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 ZNF66Q6ZN08 573 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 MOB3BQ86TA1 216 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 TGIF2LYQ8IUE0 185 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 TGIF2LXQ8IUE1 241 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 H1FOOQ8IZA3 346 aaPredicted RBP6.18□□□□□ -1.42
BDNF-209ENST00000420794 RBPMSQ93062 196 aaKnown RBP6.18□□□□□ -1.42
BDNF-209ENST00000420794 GAFA1Q96PS6 74 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 SLC25A31Q9H0C2 315 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 SEBOXQ9HB31 216 aaPredicted RBP6.18□□□□□ -1.42
BDNF-209ENST00000420794 ZNF581Q9P0T4 197 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 SHPKQ9UHJ6 478 aa6.18□□□□□ -1.42
BDNF-209ENST00000420794 HIVEP3Q5T1R4 2406 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms