RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 EIF4EBP1Q13541 118 aaPredicted RBP17.35■□□□□ 0.37
GPC1-202ENST00000420138 SLC35G3Q8N808 338 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 AGMATQ9BSE5 352 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 PFDN2Q9UHV9 154 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 KIAA2026Q5HYC2 2103 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 S100A10P60903 97 aa17.34■□□□□ 0.37
GPC1-202ENST00000420138 HFEQ30201 348 aa17.34■□□□□ 0.37
GPC1-202ENST00000420138 TMEM268Q5VZI3 342 aa17.34■□□□□ 0.37
GPC1-202ENST00000420138 DTX2Q86UW9 622 aa17.34■□□□□ 0.37
GPC1-202ENST00000420138 FAM219AQ8IW50 185 aa17.34■□□□□ 0.37
GPC1-202ENST00000420138 SELENOHQ8IZQ5 122 aaKnown RBP17.34■□□□□ 0.37
GPC1-202ENST00000420138 ZNF645Q8N7E2 425 aa17.34■□□□□ 0.37
GPC1-202ENST00000420138 CORO2AQ92828 525 aa17.34■□□□□ 0.37
GPC1-202ENST00000420138 NINJ1Q92982 152 aa17.34■□□□□ 0.37
GPC1-202ENST00000420138 AQP10Q96PS8 301 aa17.34■□□□□ 0.37
GPC1-202ENST00000420138 CTSZQ9UBR2 303 aa17.34■□□□□ 0.37
GPC1-202ENST00000420138 JPT1Q9UK76 154 aa17.34■□□□□ 0.37
GPC1-202ENST00000420138 RNF150Q9ULK6 438 aa17.34■□□□□ 0.37
GPC1-202ENST00000420138 UBE2J1Q9Y385 318 aaPredicted RBP17.34■□□□□ 0.37
GPC1-202ENST00000420138 RBM7Q9Y580 266 aaKnown RBP17.34■□□□□ 0.37
GPC1-202ENST00000420138 HRNRQ86YZ3 2850 aaPredicted RBP17.34■□□□□ 0.37
GPC1-202ENST00000420138 MYO18BQ8IUG5 2567 aa17.34■□□□□ 0.37
GPC1-202ENST00000420138 TANC2Q9HCD6 1990 aa17.34■□□□□ 0.37
GPC1-202ENST00000420138 UBR5O95071 2799 aaPredicted RBP17.33■□□□□ 0.37
GPC1-202ENST00000420138 OMGP23515 440 aa17.33■□□□□ 0.37
GPC1-202ENST00000420138 SRPXP78539 464 aa17.33■□□□□ 0.37
GPC1-202ENST00000420138 LTC4SQ16873 150 aa17.33■□□□□ 0.37
GPC1-202ENST00000420138 UTF1Q5T230 341 aa17.33■□□□□ 0.37
GPC1-202ENST00000420138 OR1S1Q8NH92 325 aa17.33■□□□□ 0.37
GPC1-202ENST00000420138 RBPMSQ93062 196 aaKnown RBP17.33■□□□□ 0.37
GPC1-202ENST00000420138 REG4Q9BYZ8 158 aa17.33■□□□□ 0.37
GPC1-202ENST00000420138 OR2D2Q9H210 308 aa17.33■□□□□ 0.37
GPC1-202ENST00000420138 LINC00574Q9H8X3 128 aa17.33■□□□□ 0.37
GPC1-202ENST00000420138 SDHAF2Q9NX18 166 aa17.33■□□□□ 0.37
GPC1-202ENST00000420138 KAAG1Q9UBP8 84 aa17.33■□□□□ 0.37
GPC1-202ENST00000420138 SLC25A10Q9UBX3 287 aaPredicted RBP17.33■□□□□ 0.37
GPC1-202ENST00000420138 KCNS2Q9ULS6 477 aa17.33■□□□□ 0.37
GPC1-202ENST00000420138 KLF2Q9Y5W3 355 aaPredicted RBP17.33■□□□□ 0.37
GPC1-202ENST00000420138 ABCA4P78363 2273 aa17.33■□□□□ 0.36
GPC1-202ENST00000420138 KBTBD11-OT1A0A1B0GTJ5 212 aa17.33■□□□□ 0.36
GPC1-202ENST00000420138 MORN2Q502X0 79 aa17.33■□□□□ 0.36
GPC1-202ENST00000420138 OR51H1Q8NH63 302 aa17.33■□□□□ 0.36
GPC1-202ENST00000420138 STOML3Q8TAV4 291 aa17.33■□□□□ 0.36
GPC1-202ENST00000420138 CLN8Q9UBY8 286 aa17.33■□□□□ 0.36
GPC1-202ENST00000420138 CHD6Q8TD26 2715 aa17.32■□□□□ 0.36
GPC1-202ENST00000420138 DOPEY1Q5JWR5 2465 aa17.32■□□□□ 0.36
GPC1-202ENST00000420138 MFSD2BA6NFX1 497 aa17.32■□□□□ 0.36
GPC1-202ENST00000420138 YPEL1O60688 119 aa17.32■□□□□ 0.36
GPC1-202ENST00000420138 SRSF1Q07955 248 aaKnown RBP eCLIP17.32■□□□□ 0.36
GPC1-202ENST00000420138 YPEL2Q96QA6 119 aa17.32■□□□□ 0.36
GPC1-202ENST00000420138 TMED3Q9Y3Q3 217 aa17.32■□□□□ 0.36
GPC1-202ENST00000420138 TRGV10A0A0A0MS01 117 aa17.31■□□□□ 0.36
GPC1-202ENST00000420138 MSGN1A6NI15 193 aa17.31■□□□□ 0.36
GPC1-202ENST00000420138 ADAM20O43506 726 aa17.31■□□□□ 0.36
GPC1-202ENST00000420138 S100GP29377 79 aa17.31■□□□□ 0.36
GPC1-202ENST00000420138 SMCO1Q147U7 214 aa17.31■□□□□ 0.36
GPC1-202ENST00000420138 MSMO1Q15800 293 aa17.31■□□□□ 0.36
GPC1-202ENST00000420138 ZBTB34Q8NCN2 500 aa17.31■□□□□ 0.36
GPC1-202ENST00000420138 C19orf12Q9NSK7 152 aa17.31■□□□□ 0.36
GPC1-202ENST00000420138 USP9XQ93008 2570 aaPredicted RBP17.31■□□□□ 0.36
GPC1-202ENST00000420138 A6NNC1 897 aa17.31■□□□□ 0.36
GPC1-202ENST00000420138 ST8SIA5O15466 376 aa17.31■□□□□ 0.36
GPC1-202ENST00000420138 FSTL3O95633 263 aa17.31■□□□□ 0.36
GPC1-202ENST00000420138 TPT1P13693 172 aaKnown RBP17.31■□□□□ 0.36
GPC1-202ENST00000420138 NDUFB7P17568 137 aa17.31■□□□□ 0.36
GPC1-202ENST00000420138 ZNF134P52741 427 aa17.31■□□□□ 0.36
GPC1-202ENST00000420138 IL22RA2Q969J5 263 aa17.31■□□□□ 0.36
GPC1-202ENST00000420138 GNG12Q9UBI6 72 aa17.31■□□□□ 0.36
GPC1-202ENST00000420138 ZNF585BQ52M93 769 aa17.3■□□□□ 0.36
GPC1-202ENST00000420138 ZNF695Q8IW36 515 aa17.3■□□□□ 0.36
GPC1-202ENST00000420138 FOXRED2Q8IWF2 684 aa17.3■□□□□ 0.36
GPC1-202ENST00000420138 CCDC28AQ8IWP9 274 aa17.3■□□□□ 0.36
GPC1-202ENST00000420138 ABHD14BQ96IU4 210 aa17.3■□□□□ 0.36
GPC1-202ENST00000420138 RAB1BQ9H0U4 201 aa17.3■□□□□ 0.36
GPC1-202ENST00000420138 CYTL1Q9NRR1 136 aa17.3■□□□□ 0.36
GPC1-202ENST00000420138 PSG11Q9UQ72 335 aa17.3■□□□□ 0.36
GPC1-202ENST00000420138 ZNF729A6NN14 1252 aaPredicted RBP17.29■□□□□ 0.36
GPC1-202ENST00000420138 SHOXO15266 292 aa17.29■□□□□ 0.36
GPC1-202ENST00000420138 PROP1O75360 226 aa17.29■□□□□ 0.36
GPC1-202ENST00000420138 DEDDO75618 318 aa17.29■□□□□ 0.36
GPC1-202ENST00000420138 MMP23AO75900 390 aa17.29■□□□□ 0.36
GPC1-202ENST00000420138 LY6HO94772 140 aa17.29■□□□□ 0.36
GPC1-202ENST00000420138 IGKV1-39P01597 117 aa17.29■□□□□ 0.36
GPC1-202ENST00000420138 IGKV1D-39P04432 117 aa17.29■□□□□ 0.36
GPC1-202ENST00000420138 RPL30P62888 115 aaKnown RBP17.29■□□□□ 0.36
GPC1-202ENST00000420138 ZNF273Q14593 569 aa17.29■□□□□ 0.36
GPC1-202ENST00000420138 NMSQ5H8A3 153 aa17.29■□□□□ 0.36
GPC1-202ENST00000420138 FAM74A1Q5RGS3 127 aa17.29■□□□□ 0.36
GPC1-202ENST00000420138 OR52M1Q8NGK5 317 aa17.29■□□□□ 0.36
GPC1-202ENST00000420138 GFOD1Q9NXC2 390 aa17.29■□□□□ 0.36
GPC1-202ENST00000420138 LINC00312Q9Y6C7 94 aa17.29■□□□□ 0.36
GPC1-202ENST00000420138 SESN1Q9Y6P5 492 aa17.29■□□□□ 0.36
GPC1-202ENST00000420138 hADV38S2A0JD32 116 aa17.28■□□□□ 0.36
GPC1-202ENST00000420138 DVL1O14640 695 aa17.28■□□□□ 0.36
GPC1-202ENST00000420138 NDUFA2O43678 99 aa17.28■□□□□ 0.36
GPC1-202ENST00000420138 IGHV2-70P01814 119 aa17.28■□□□□ 0.36
GPC1-202ENST00000420138 MEF2CQ06413 473 aaPredicted RBP17.28■□□□□ 0.36
GPC1-202ENST00000420138 EDARADDQ8WWZ3 215 aa17.28■□□□□ 0.36
GPC1-202ENST00000420138 LRBAP50851 2863 aa17.28■□□□□ 0.36
GPC1-202ENST00000420138 DUXBA0A1W2PPF3 345 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms