RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 GVQW1Q8N7I0 195 aa10□□□□□ -0.81
SKA1-203ENST00000417656 OR4F5Q8NH21 305 aa10□□□□□ -0.81
SKA1-203ENST00000417656 EDARADDQ8WWZ3 215 aa10□□□□□ -0.81
SKA1-203ENST00000417656 ABHD14BQ96IU4 210 aa10□□□□□ -0.81
SKA1-203ENST00000417656 MRPL20Q9BYC9 149 aaKnown RBP10□□□□□ -0.81
SKA1-203ENST00000417656 C11orf54Q9H0W9 315 aaPredicted RBP10□□□□□ -0.81
SKA1-203ENST00000417656 RBM38Q9H0Z9 239 aaKnown RBP10□□□□□ -0.81
SKA1-203ENST00000417656 RDH8Q9NYR8 311 aa10□□□□□ -0.81
SKA1-203ENST00000417656 PITPNC1Q9UKF7 332 aa10□□□□□ -0.81
SKA1-203ENST00000417656 TRBV6-7A0A0A0MS04 114 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 FAM25AB3EWG3 89 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 FAM25CB3EWG5 89 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 FAM25GB3EWG6 89 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 ITGB1BP1O14713 200 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 TXNL1O43396 289 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 LANCL1O43813 399 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 IGKV1D-33P01593 117 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 IGKV1-33P01594 117 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 LPLP06858 475 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 COMPP49747 757 aaPredicted RBP9.99□□□□□ -0.81
SKA1-203ENST00000417656 HES1Q14469 280 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 HABP2Q14520 560 aaPredicted RBP9.99□□□□□ -0.81
SKA1-203ENST00000417656 RPL39P5Q59GN2 51 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 ZNF833PQ6ZTB9 187 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 OR4C13Q8NGP0 309 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 OR10J5Q8NHC4 309 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 RBMXL1Q96E39 390 aaKnown RBP9.99□□□□□ -0.81
SKA1-203ENST00000417656 CMTM3Q96MX0 182 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 GINS4Q9BRT9 223 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 SLC25A33Q9BSK2 321 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 NPFFR1Q9GZQ6 430 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 ANXA10Q9UJ72 324 aa9.99□□□□□ -0.81
SKA1-203ENST00000417656 FAM90A9PA6NNJ1 464 aa9.98□□□□□ -0.81
SKA1-203ENST00000417656 ZNF736B4DX44 427 aaPredicted RBP9.98□□□□□ -0.81
SKA1-203ENST00000417656 DIRAS3O95661 229 aa9.98□□□□□ -0.81
SKA1-203ENST00000417656 TMEM11P17152 192 aa9.98□□□□□ -0.81
SKA1-203ENST00000417656 LSAMPQ13449 338 aa9.98□□□□□ -0.81
SKA1-203ENST00000417656 TREML4Q6UXN2 200 aa9.98□□□□□ -0.81
SKA1-203ENST00000417656 SNX29P2Q8IUI4 249 aa9.98□□□□□ -0.81
SKA1-203ENST00000417656 LAX1Q8IWV1 398 aa9.98□□□□□ -0.81
SKA1-203ENST00000417656 H1FOOQ8IZA3 346 aaPredicted RBP9.98□□□□□ -0.81
SKA1-203ENST00000417656 BEST4Q8NFU0 473 aa9.98□□□□□ -0.81
SKA1-203ENST00000417656 SPATA3Q8NHX4 192 aa9.98□□□□□ -0.81
SKA1-203ENST00000417656 ZNF251Q9BRH9 671 aa9.98□□□□□ -0.81
SKA1-203ENST00000417656 TOLLIPQ9H0E2 274 aa9.98□□□□□ -0.81
SKA1-203ENST00000417656 MIXL1Q9H2W2 232 aa9.98□□□□□ -0.81
SKA1-203ENST00000417656 RANBP3Q9H6Z4 567 aaPredicted RBP9.98□□□□□ -0.81
SKA1-203ENST00000417656 IFT46Q9NQC8 304 aa9.98□□□□□ -0.81
SKA1-203ENST00000417656 EXTL2Q9UBQ6 330 aa9.98□□□□□ -0.81
SKA1-203ENST00000417656 RNF150Q9ULK6 438 aa9.98□□□□□ -0.81
SKA1-203ENST00000417656 MRPS7Q9Y2R9 242 aaKnown RBP9.98□□□□□ -0.81
SKA1-203ENST00000417656 RAB29O14966 203 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 RGS5O15539 181 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 TSPAN9O75954 239 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 OR2F2O95006 317 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 HLA-DQB1P01920 261 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 FAM106CPP0CH98 169 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 ARPC4P59998 168 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 HNF4GQ14541 408 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 RNASE12Q5GAN4 147 aaKnown RBP9.97□□□□□ -0.81
SKA1-203ENST00000417656 FAM71F2Q6NXP2 309 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 CNIH2Q6PI25 160 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 C16orf82Q7Z2V1 217 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 HOGA1Q86XE5 327 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 THNSL2Q86YJ6 484 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 LINC01006Q8NI28 216 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 SNAPC3Q92966 411 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 RBM14Q96PK6 669 aaKnown RBP9.97□□□□□ -0.81
SKA1-203ENST00000417656 NABP2Q9BQ15 211 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 AGMATQ9BSE5 352 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 OR2D2Q9H210 308 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 ZNF702PQ9H963 129 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 BEX1Q9HBH7 125 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 PIPOXQ9P0Z9 390 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 RSL24D1Q9UHA3 163 aaKnown RBP9.97□□□□□ -0.81
SKA1-203ENST00000417656 SIGLEC9Q9Y336 463 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 MOB4Q9Y3A3 225 aa9.97□□□□□ -0.81
SKA1-203ENST00000417656 STAB1Q9NY15 2570 aa9.96□□□□□ -0.81
SKA1-203ENST00000417656 SMIM31A0A1B0GVY4 71 aa9.96□□□□□ -0.82
SKA1-203ENST00000417656 CLPSL1A2RUU4 121 aa9.96□□□□□ -0.82
SKA1-203ENST00000417656 SH2D7A6NKC9 451 aaPredicted RBP9.96□□□□□ -0.82
SKA1-203ENST00000417656 CTDSP2O14595 271 aa9.96□□□□□ -0.82
SKA1-203ENST00000417656 OR8U9P0C7N5 309 aa9.96□□□□□ -0.82
SKA1-203ENST00000417656 NFYAP23511 347 aaPredicted RBP9.96□□□□□ -0.82
SKA1-203ENST00000417656 CD1BP29016 333 aa9.96□□□□□ -0.82
SKA1-203ENST00000417656 PRSS3P35030 304 aa9.96□□□□□ -0.82
SKA1-203ENST00000417656 CBX5P45973 191 aa9.96□□□□□ -0.82
SKA1-203ENST00000417656 GPR12P47775 334 aa9.96□□□□□ -0.82
SKA1-203ENST00000417656 OR8U1Q8NH10 309 aa9.96□□□□□ -0.82
SKA1-203ENST00000417656 C5orf30Q96GV9 206 aa9.96□□□□□ -0.82
SKA1-203ENST00000417656 EAF1Q96JC9 268 aaPredicted RBP9.96□□□□□ -0.82
SKA1-203ENST00000417656 AKR1E2Q96JD6 320 aa9.96□□□□□ -0.82
SKA1-203ENST00000417656 S1PR3Q99500 378 aa9.96□□□□□ -0.82
SKA1-203ENST00000417656 DCUN1D5Q9BTE7 237 aa9.96□□□□□ -0.82
SKA1-203ENST00000417656 SLIRPQ9GZT3 109 aaKnown RBP9.96□□□□□ -0.82
SKA1-203ENST00000417656 C6orf62Q9GZU0 229 aaPredicted RBP9.96□□□□□ -0.82
SKA1-203ENST00000417656 C16orf95Q9H693 158 aa9.96□□□□□ -0.82
SKA1-203ENST00000417656 ZNF221Q9UK13 617 aa9.96□□□□□ -0.82
SKA1-203ENST00000417656 ANAPC10Q9UM13 185 aa9.96□□□□□ -0.82
SKA1-203ENST00000417656 MMP24Q9Y5R2 645 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms