RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 ZNF880Q6PDB4 577 aa5.53□□□□□ -1.52
NCL-203ENST00000417652 CCBE1Q6UXH8 406 aaPredicted RBP5.53□□□□□ -1.52
NCL-203ENST00000417652 THNSL2Q86YJ6 484 aa5.53□□□□□ -1.52
NCL-203ENST00000417652 LINC01006Q8NI28 216 aa5.53□□□□□ -1.52
NCL-203ENST00000417652 NUDCD2Q8WVJ2 157 aa5.53□□□□□ -1.52
NCL-203ENST00000417652 RTN4IP1Q8WWV3 396 aaPredicted RBP5.53□□□□□ -1.52
NCL-203ENST00000417652 RBM14Q96PK6 669 aaKnown RBP5.53□□□□□ -1.52
NCL-203ENST00000417652 ZNF747Q9BV97 191 aa5.53□□□□□ -1.52
NCL-203ENST00000417652 NAA50Q9GZZ1 169 aaKnown RBP5.53□□□□□ -1.52
NCL-203ENST00000417652 GHITMQ9H3K2 345 aa5.53□□□□□ -1.52
NCL-203ENST00000417652 RANBP3Q9H6Z4 567 aaPredicted RBP5.53□□□□□ -1.52
NCL-203ENST00000417652 RDH8Q9NYR8 311 aa5.53□□□□□ -1.52
NCL-203ENST00000417652 PIPOXQ9P0Z9 390 aa5.53□□□□□ -1.52
NCL-203ENST00000417652 OR1A1Q9P1Q5 309 aa5.53□□□□□ -1.52
NCL-203ENST00000417652 ELF5Q9UKW6 265 aaPredicted RBP5.53□□□□□ -1.52
NCL-203ENST00000417652 KCNK7Q9Y2U2 307 aa5.53□□□□□ -1.52
NCL-203ENST00000417652 MMP24Q9Y5R2 645 aa5.53□□□□□ -1.52
NCL-203ENST00000417652 A0A1W2PPI3 338 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 XRCC3O43542 346 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 CHST1O43916 411 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 TSPAN9O75954 239 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 OR2F2O95006 317 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 GABARAPO95166 117 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 MOSP00540 346 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 FCER2P06734 321 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 OR8U9P0C7N5 309 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 CD1BP29016 333 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 PRSS3P35030 304 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 VDAC2P45880 294 aaPredicted RBP5.52□□□□□ -1.53
NCL-203ENST00000417652 OR3A3P47888 321 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 TMBIM6P55061 237 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 CBX3Q13185 183 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 CTF1Q16619 201 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 ZNF260Q3ZCT1 412 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 IGSF11Q5DX21 431 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 LY6G6FQ5SQ64 297 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 C11orf88Q6PI97 169 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 CENPVQ7Z7K6 275 aaPredicted RBP5.52□□□□□ -1.53
NCL-203ENST00000417652 ZNF439Q8NDP4 499 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 OR8U1Q8NH10 309 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 RAB2BQ8WUD1 216 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 SLC25A38Q96DW6 304 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 ABHD14BQ96IU4 210 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 RASL11BQ9BPW5 248 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 ZNF251Q9BRH9 671 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 C11orf54Q9H0W9 315 aaPredicted RBP5.52□□□□□ -1.53
NCL-203ENST00000417652 ABCG5Q9H222 651 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 C16orf95Q9H693 158 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 AUNIPQ9H7T9 357 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.52□□□□□ -1.53
NCL-203ENST00000417652 ADAM30Q9UKF2 790 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 SIGLEC9Q9Y336 463 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 MOB4Q9Y3A3 225 aa5.52□□□□□ -1.53
NCL-203ENST00000417652 TENM1Q9UKZ4 2725 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 SAA2-SAA4A0A096LPE2 208 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 MEIS3P1A6NDR6 274 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 M0R1X1 148 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 ITGB1BP1O14713 200 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 HPGDSO60760 199 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 DIRAS3O95661 229 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 APOA1P02647 267 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 APOA2P02652 100 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 SAA2P0DJI9 122 aaPredicted RBP5.51□□□□□ -1.53
NCL-203ENST00000417652 MC5RP33032 325 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 LUMP51884 338 aaPredicted RBP5.51□□□□□ -1.53
NCL-203ENST00000417652 TAS2R20P59543 309 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 BLCAPP62952 87 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 HABP2Q14520 560 aaPredicted RBP5.51□□□□□ -1.53
NCL-203ENST00000417652 PLGLAQ15195 96 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 SRSF7Q16629 238 aaKnown RBP eCLIP5.51□□□□□ -1.534e-15■□□□□ 9.3
NCL-203ENST00000417652 RPL39P5Q59GN2 51 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 CNIH2Q6PI25 160 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 KLHDC1Q8N7A1 406 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 BEST4Q8NFU0 473 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 ST6GALNAC6Q969X2 333 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 EAF1Q96JC9 268 aaPredicted RBP5.51□□□□□ -1.53
NCL-203ENST00000417652 CMTM3Q96MX0 182 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 MRPL20Q9BYC9 149 aaKnown RBP5.51□□□□□ -1.53
NCL-203ENST00000417652 OR2D2Q9H210 308 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 NECAP2Q9NVZ3 263 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 KIAA1456Q9P272 454 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 ANXA10Q9UJ72 324 aa5.51□□□□□ -1.53
NCL-203ENST00000417652 TRBV6-7A0A0A0MS04 114 aa5.5□□□□□ -1.53
NCL-203ENST00000417652 IGKV1-6A0A0C4DH72 117 aa5.5□□□□□ -1.53
NCL-203ENST00000417652 SH2D7A6NKC9 451 aaPredicted RBP5.5□□□□□ -1.53
NCL-203ENST00000417652 FAM90A9PA6NNJ1 464 aa5.5□□□□□ -1.53
NCL-203ENST00000417652 ZNF736B4DX44 427 aaPredicted RBP5.5□□□□□ -1.53
NCL-203ENST00000417652 TUSC2O75896 110 aa5.5□□□□□ -1.53
NCL-203ENST00000417652 EIF4EP06730 217 aaKnown RBP5.5□□□□□ -1.53
NCL-203ENST00000417652 PTHLHP12272 177 aa5.5□□□□□ -1.53
NCL-203ENST00000417652 ELK1P19419 428 aa5.5□□□□□ -1.53
NCL-203ENST00000417652 NFYAP23511 347 aaPredicted RBP5.5□□□□□ -1.53
NCL-203ENST00000417652 ZNF137PP52743 207 aa5.5□□□□□ -1.53
NCL-203ENST00000417652 RPS16P62249 146 aaKnown RBP5.5□□□□□ -1.53
NCL-203ENST00000417652 LSAMPQ13449 338 aa5.5□□□□□ -1.53
NCL-203ENST00000417652 SPCS2Q15005 226 aa5.5□□□□□ -1.53
NCL-203ENST00000417652 MMDQ15546 238 aa5.5□□□□□ -1.53
NCL-203ENST00000417652 FAM71F2Q6NXP2 309 aa5.5□□□□□ -1.53
NCL-203ENST00000417652 Q6ZPA2 131 aa5.5□□□□□ -1.53
NCL-203ENST00000417652 Q6ZS49 121 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms