RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 PMP22Q01453 160 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 ZNF816Q0VGE8 651 aaPredicted RBP12.2□□□□□ -0.46
HDAC9-208ENST00000417496 DBX2Q6ZNG2 339 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 TPRX1Q8N7U7 411 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 ZNF610Q8N9Z0 462 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 LSM10Q969L4 123 aaKnown RBP12.2□□□□□ -0.46
HDAC9-208ENST00000417496 OR51M1Q9H341 326 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 TMPRSS5Q9H3S3 457 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 RBKSQ9H477 322 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 TMEM9BQ9NQ34 198 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 TINAGQ9UJW2 476 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 TRAV1-1A0A0B4J248 108 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 CLDN1O95832 211 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 MDH2P40926 338 aaKnown RBP12.2□□□□□ -0.46
HDAC9-208ENST00000417496 RPL30P62888 115 aaKnown RBP12.2□□□□□ -0.46
HDAC9-208ENST00000417496 LRRC75BQ2VPJ9 315 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 SPINK9Q5DT21 86 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 PYY3Q5JQD4 70 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 TMEM164Q5U3C3 297 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 DHRS13Q6UX07 377 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 DPPA3Q6W0C5 159 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 OR52L2PQ8NGH6 319 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 SLC25A40Q8TBP6 338 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 CA5BP1Q8WTZ4 195 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 GPR87Q9BY21 358 aa12.2□□□□□ -0.46
HDAC9-208ENST00000417496 SMPD2O60906 423 aa12.19□□□□□ -0.46
HDAC9-208ENST00000417496 DEFA4P12838 97 aa12.19□□□□□ -0.46
HDAC9-208ENST00000417496 OR3A1P47881 315 aa12.19□□□□□ -0.46
HDAC9-208ENST00000417496 AESQ08117 197 aa12.19□□□□□ -0.46
HDAC9-208ENST00000417496 TBC1D28Q2M2D7 210 aa12.19□□□□□ -0.46
HDAC9-208ENST00000417496 BTNL3Q6UXE8 466 aa12.19□□□□□ -0.46
HDAC9-208ENST00000417496 RPP25LQ8N5L8 163 aaKnown RBP12.19□□□□□ -0.46
HDAC9-208ENST00000417496 WDR61Q9GZS3 305 aaKnown RBP12.19□□□□□ -0.46
HDAC9-208ENST00000417496 CLN8Q9UBY8 286 aa12.19□□□□□ -0.46
HDAC9-208ENST00000417496 KMT2EQ8IZD2 1858 aa12.19□□□□□ -0.46
HDAC9-208ENST00000417496 LRP5LA4QPB2 252 aa12.19□□□□□ -0.46
HDAC9-208ENST00000417496 KLRC4-KLRK1H3BQV0 150 aa12.19□□□□□ -0.46
HDAC9-208ENST00000417496 PSG7Q13046 419 aa12.19□□□□□ -0.46
HDAC9-208ENST00000417496 C5orf30Q96GV9 206 aa12.19□□□□□ -0.46
HDAC9-208ENST00000417496 OR2D2Q9H210 308 aa12.19□□□□□ -0.46
HDAC9-208ENST00000417496 LIN7CQ9NUP9 197 aaKnown RBP12.19□□□□□ -0.46
HDAC9-208ENST00000417496 CISD1Q9NZ45 108 aaKnown RBP12.19□□□□□ -0.46
HDAC9-208ENST00000417496 FZR1Q9UM11 496 aa12.19□□□□□ -0.46
HDAC9-208ENST00000417496 NPIPB11E5RHQ5 1161 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 SOD3P08294 240 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 MPV17P39210 176 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 CDX1P47902 265 aaPredicted RBP12.18□□□□□ -0.46
HDAC9-208ENST00000417496 HBG1P69891 147 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 HBG2P69892 147 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 FAM209BQ5JX69 171 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 MDS2Q8NDY4 140 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 ABHD5Q8WTS1 349 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 GPR61Q9BZJ8 451 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 HIPK2Q9H2X6 1198 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 MAP1LC3B2A6NCE7 125 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 SH2D1BO14796 132 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 IGHV2-70P01814 119 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 PGA5P0DJD9 388 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 SLC38A11Q08AI6 406 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 Q6ZR03 302 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 FRZBQ92765 325 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 TAF15Q92804 592 aaKnown RBP eCLIP12.18□□□□□ -0.46
HDAC9-208ENST00000417496 ZDHHC16Q969W1 377 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 MAP1LC3BQ9GZQ8 125 aa12.18□□□□□ -0.46
HDAC9-208ENST00000417496 MBNL3Q9NUK0 354 aaKnown RBP12.18□□□□□ -0.46
HDAC9-208ENST00000417496 KLF13Q9Y2Y9 288 aaPredicted RBP12.18□□□□□ -0.46
HDAC9-208ENST00000417496 SMG1Q96Q15 3661 aaKnown RBP12.18□□□□□ -0.46
HDAC9-208ENST00000417496 TRGV5A0A0B4J1U4 118 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 C21orf140B9A014 251 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 AGFG2O95081 481 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 TNFSF15O95150 251 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 HAND1O96004 215 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 IGHV1-2P23083 117 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 RFESDQ8TAC1 157 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 GATAD1Q8WUU5 269 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 MBD3L1Q8WWY6 194 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 NANOS1Q8WY41 292 aaKnown RBP12.17□□□□□ -0.46
HDAC9-208ENST00000417496 PLPPR2Q96GM1 343 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 FAM210BQ96KR6 192 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 OBP2BQ9NPH6 170 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 UFSP2Q9NUQ7 469 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 POLDIP2Q9Y2S7 368 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 IGHV3-43A0A0B4J1X8 118 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 DEFB108AA8MXU0 73 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 C12orf77C9JDV5 145 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 IGHV3-43DP0DP04 118 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 S100PP25815 95 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 BRWD1-AS2P59051 145 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 TNFRSF9Q07011 255 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 ZNF146Q15072 292 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 OR10D4PQ8NGN7 298 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 LHX4Q969G2 390 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 SLC25A22Q9H936 323 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 CDH20Q9HBT6 801 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 SIRT7Q9NRC8 400 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 TREM2Q9NZC2 230 aa12.17□□□□□ -0.46
HDAC9-208ENST00000417496 SVILO95425 2214 aa12.16□□□□□ -0.46
HDAC9-208ENST00000417496 CXorf65A6NEN9 183 aa12.16□□□□□ -0.46
HDAC9-208ENST00000417496 C17orf98A8MV24 154 aa12.16□□□□□ -0.46
HDAC9-208ENST00000417496 ZNF737O75373 536 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms