RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 HNF4GQ14541 408 aa14.37□□□□□ -0.11
SEMA3B-201ENST00000416295 HERPUD1Q15011 391 aa14.37□□□□□ -0.11
SEMA3B-201ENST00000416295 UBE2NLQ5JXB2 153 aa14.37□□□□□ -0.11
SEMA3B-201ENST00000416295 GPR107Q5VW38 600 aa14.37□□□□□ -0.11
SEMA3B-201ENST00000416295 OR10J5Q8NHC4 309 aa14.37□□□□□ -0.11
SEMA3B-201ENST00000416295 MAFIPQ8WZ33 124 aa14.37□□□□□ -0.11
SEMA3B-201ENST00000416295 S1PR3Q99500 378 aa14.37□□□□□ -0.11
SEMA3B-201ENST00000416295 ABCG5Q9H222 651 aa14.37□□□□□ -0.11
SEMA3B-201ENST00000416295 ELF5Q9UKW6 265 aaPredicted RBP14.37□□□□□ -0.11
SEMA3B-201ENST00000416295 TRAV18A0A075B6X5 111 aa14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 BET1O15155 118 aa14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 FGF16O43320 207 aa14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 PEX14O75381 377 aa14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 GSTT2P0CG29 244 aa14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 GSTT2BP0CG30 244 aa14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 VDAC2P45880 294 aaPredicted RBP14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 LSAMPQ13449 338 aa14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 CTF1Q16619 201 aa14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 ABCA11PQ4W5N1 156 aa14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 NUDCD2Q8WVJ2 157 aa14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 S100A16Q96FQ6 103 aaKnown RBP14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 EAF1Q96JC9 268 aaPredicted RBP14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 TOLLIPQ9H0E2 274 aa14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 PARP12Q9H0J9 701 aaKnown RBP14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 C11orf54Q9H0W9 315 aaPredicted RBP14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 SERTAD4Q9NUC0 356 aa14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 RDH8Q9NYR8 311 aa14.36□□□□□ -0.11
SEMA3B-201ENST00000416295 TRBV6-7A0A0A0MS04 114 aa14.35□□□□□ -0.11
SEMA3B-201ENST00000416295 MOSP00540 346 aa14.35□□□□□ -0.11
SEMA3B-201ENST00000416295 AMY1AP04745 511 aa14.35□□□□□ -0.11
SEMA3B-201ENST00000416295 AMY2AP04746 511 aa14.35□□□□□ -0.11
SEMA3B-201ENST00000416295 OR3A3P47888 321 aa14.35□□□□□ -0.11
SEMA3B-201ENST00000416295 KRTAP10-3P60369 221 aa14.35□□□□□ -0.11
SEMA3B-201ENST00000416295 SRSF4Q08170 494 aaKnown RBP14.35□□□□□ -0.11
SEMA3B-201ENST00000416295 IGSF11Q5DX21 431 aa14.35□□□□□ -0.11
SEMA3B-201ENST00000416295 PRR31Q5SQ13 230 aa14.35□□□□□ -0.11
SEMA3B-201ENST00000416295 KLHDC1Q8N7A1 406 aa14.35□□□□□ -0.11
SEMA3B-201ENST00000416295 SAMD12Q8N8I0 201 aa14.35□□□□□ -0.11
SEMA3B-201ENST00000416295 AGMATQ9BSE5 352 aa14.35□□□□□ -0.11
SEMA3B-201ENST00000416295 ST6GALNAC5Q9BVH7 336 aa14.35□□□□□ -0.11
SEMA3B-201ENST00000416295 MRPL20Q9BYC9 149 aaKnown RBP14.35□□□□□ -0.11
SEMA3B-201ENST00000416295 NAA50Q9GZZ1 169 aaKnown RBP14.35□□□□□ -0.11
SEMA3B-201ENST00000416295 VSIG10L2P0DP72 767 aa14.34□□□□□ -0.11
SEMA3B-201ENST00000416295 RORCP51449 518 aa14.34□□□□□ -0.11
SEMA3B-201ENST00000416295 Q6ZS46 218 aa14.34□□□□□ -0.11
SEMA3B-201ENST00000416295 Q8N6K4 173 aa14.34□□□□□ -0.11
SEMA3B-201ENST00000416295 C5orf56Q8N8D9 126 aa14.34□□□□□ -0.11
SEMA3B-201ENST00000416295 OR8H1Q8NGG4 311 aa14.34□□□□□ -0.11
SEMA3B-201ENST00000416295 ACOT12Q8WYK0 555 aa14.34□□□□□ -0.11
SEMA3B-201ENST00000416295 ABHD14BQ96IU4 210 aa14.34□□□□□ -0.11
SEMA3B-201ENST00000416295 NABP2Q9BQ15 211 aa14.34□□□□□ -0.11
SEMA3B-201ENST00000416295 GINS4Q9BRT9 223 aa14.34□□□□□ -0.11
SEMA3B-201ENST00000416295 ZNF221Q9UK13 617 aa14.34□□□□□ -0.11
SEMA3B-201ENST00000416295 NCBP2LA6PVI3 153 aaKnown RBP14.33□□□□□ -0.12
SEMA3B-201ENST00000416295 ZNF736B4DX44 427 aaPredicted RBP14.33□□□□□ -0.12
SEMA3B-201ENST00000416295 XRCC3O43542 346 aa14.33□□□□□ -0.12
SEMA3B-201ENST00000416295 SSX5O60225 188 aa14.33□□□□□ -0.12
SEMA3B-201ENST00000416295 CTXN2P0C2S0 81 aa14.33□□□□□ -0.12
SEMA3B-201ENST00000416295 ZNF251Q9BRH9 671 aa14.33□□□□□ -0.12
SEMA3B-201ENST00000416295 AUNIPQ9H7T9 357 aa14.33□□□□□ -0.12
SEMA3B-201ENST00000416295 IGKV1D-8A0A087WSZ0 117 aa14.32□□□□□ -0.12
SEMA3B-201ENST00000416295 RPL5P46777 297 aaKnown RBP14.32□□□□□ -0.12
SEMA3B-201ENST00000416295 GPR12P47775 334 aa14.32□□□□□ -0.12
SEMA3B-201ENST00000416295 RPL39P5Q59GN2 51 aa14.32□□□□□ -0.12
SEMA3B-201ENST00000416295 C9orf152Q5JTZ5 239 aa14.32□□□□□ -0.12
SEMA3B-201ENST00000416295 TMEM69Q5SWH9 247 aa14.32□□□□□ -0.12
SEMA3B-201ENST00000416295 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.32□□□□□ -0.12
SEMA3B-201ENST00000416295 AP3S1Q92572 193 aa14.32□□□□□ -0.12
SEMA3B-201ENST00000416295 CMTM3Q96MX0 182 aa14.32□□□□□ -0.12
SEMA3B-201ENST00000416295 WNT10AQ9GZT5 417 aa14.32□□□□□ -0.12
SEMA3B-201ENST00000416295 COMMD3Q9UBI1 195 aa14.32□□□□□ -0.12
SEMA3B-201ENST00000416295 RNF150Q9ULK6 438 aa14.32□□□□□ -0.12
SEMA3B-201ENST00000416295 OR5H14A6NHG9 310 aa14.31□□□□□ -0.12
SEMA3B-201ENST00000416295 APOA1P02647 267 aa14.31□□□□□ -0.12
SEMA3B-201ENST00000416295 TMEM95Q3KNT9 176 aa14.31□□□□□ -0.12
SEMA3B-201ENST00000416295 MZT2AQ6P582 158 aa14.31□□□□□ -0.12
SEMA3B-201ENST00000416295 CNIH2Q6PI25 160 aa14.31□□□□□ -0.12
SEMA3B-201ENST00000416295 RAB2BQ8WUD1 216 aa14.31□□□□□ -0.12
SEMA3B-201ENST00000416295 BCL7BQ9BQE9 202 aa14.31□□□□□ -0.12
SEMA3B-201ENST00000416295 LIN7CQ9NUP9 197 aaKnown RBP14.31□□□□□ -0.12
SEMA3B-201ENST00000416295 ANXA10Q9UJ72 324 aa14.31□□□□□ -0.12
SEMA3B-201ENST00000416295 SH2D7A6NKC9 451 aaPredicted RBP14.3□□□□□ -0.12
SEMA3B-201ENST00000416295 M0QZ24 198 aa14.3□□□□□ -0.12
SEMA3B-201ENST00000416295 OR8U9P0C7N5 309 aa14.3□□□□□ -0.12
SEMA3B-201ENST00000416295 MC5RP33032 325 aa14.3□□□□□ -0.12
SEMA3B-201ENST00000416295 CBX5P45973 191 aa14.3□□□□□ -0.12
SEMA3B-201ENST00000416295 CLVS1Q8IUQ0 354 aaPredicted RBP14.3□□□□□ -0.12
SEMA3B-201ENST00000416295 H1FOOQ8IZA3 346 aaPredicted RBP14.3□□□□□ -0.12
SEMA3B-201ENST00000416295 Q8N9W7 124 aa14.3□□□□□ -0.12
SEMA3B-201ENST00000416295 OR8U1Q8NH10 309 aa14.3□□□□□ -0.12
SEMA3B-201ENST00000416295 OR2D2Q9H210 308 aa14.3□□□□□ -0.12
SEMA3B-201ENST00000416295 GAB2Q9UQC2 676 aa14.3□□□□□ -0.12
SEMA3B-201ENST00000416295 RBM7Q9Y580 266 aaKnown RBP14.3□□□□□ -0.12
SEMA3B-201ENST00000416295 SMIM31A0A1B0GVY4 71 aa14.29□□□□□ -0.12
SEMA3B-201ENST00000416295 NOL3O60936 208 aaKnown RBP14.29□□□□□ -0.12
SEMA3B-201ENST00000416295 CT45A6P0DMU7 189 aa14.29□□□□□ -0.12
SEMA3B-201ENST00000416295 CT45A5P0DMU8 189 aa14.29□□□□□ -0.12
SEMA3B-201ENST00000416295 CT45A7P0DMV0 189 aa14.29□□□□□ -0.12
SEMA3B-201ENST00000416295 ZNF182P17025 639 aaPredicted RBP14.29□□□□□ -0.12
SEMA3B-201ENST00000416295 TMBIM6P55061 237 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms