RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 WRBO00258 174 aa12.1□□□□□ -0.47
SGCE-202ENST00000415788 WNT9BO14905 357 aa12.1□□□□□ -0.47
SGCE-202ENST00000415788 ADAP1O75689 374 aa12.1□□□□□ -0.47
SGCE-202ENST00000415788 ZNF205O95201 554 aa12.1□□□□□ -0.47
SGCE-202ENST00000415788 IGHV2-5P01817 119 aa12.1□□□□□ -0.47
SGCE-202ENST00000415788 HKR1P10072 659 aa12.1□□□□□ -0.47
SGCE-202ENST00000415788 ECI1P42126 302 aa12.1□□□□□ -0.47
SGCE-202ENST00000415788 PPT1P50897 306 aa12.1□□□□□ -0.47
SGCE-202ENST00000415788 FGF12P61328 243 aa12.1□□□□□ -0.47
SGCE-202ENST00000415788 SLC9A3R2Q15599 337 aa12.1□□□□□ -0.47
SGCE-202ENST00000415788 RPL7L1Q6DKI1 246 aaKnown RBP12.1□□□□□ -0.47
SGCE-202ENST00000415788 RBMS3Q6XE24 437 aaKnown RBP12.1□□□□□ -0.47
SGCE-202ENST00000415788 KCNG3Q8TAE7 436 aa12.1□□□□□ -0.47
SGCE-202ENST00000415788 LPAR5Q9H1C0 372 aa12.1□□□□□ -0.47
SGCE-202ENST00000415788 POLQO75417 2590 aa12.09□□□□□ -0.47
SGCE-202ENST00000415788 FLNBO75369 2602 aaKnown RBP12.09□□□□□ -0.47
SGCE-202ENST00000415788 HIST1H1DP16402 221 aaKnown RBP12.09□□□□□ -0.47
SGCE-202ENST00000415788 TAS2R46P59540 309 aa12.09□□□□□ -0.47
SGCE-202ENST00000415788 SUPT4H1P63272 117 aaKnown RBP12.09□□□□□ -0.47
SGCE-202ENST00000415788 FABP9Q0Z7S8 132 aa12.09□□□□□ -0.47
SGCE-202ENST00000415788 ANKRD55Q3KP44 614 aa12.09□□□□□ -0.47
SGCE-202ENST00000415788 Q6ZRG5 221 aa12.09□□□□□ -0.47
SGCE-202ENST00000415788 DEFB108BQ8NET1 73 aa12.09□□□□□ -0.47
SGCE-202ENST00000415788 RAB3CQ96E17 227 aa12.09□□□□□ -0.47
SGCE-202ENST00000415788 AKR1E2Q96JD6 320 aa12.09□□□□□ -0.47
SGCE-202ENST00000415788 OR10C1Q96KK4 312 aa12.09□□□□□ -0.47
SGCE-202ENST00000415788 C1orf147Q96MC9 270 aaPredicted RBP12.09□□□□□ -0.47
SGCE-202ENST00000415788 RTBDNQ9BSG5 229 aaPredicted RBP12.09□□□□□ -0.47
SGCE-202ENST00000415788 CHD3Q12873 2000 aaKnown RBP12.09□□□□□ -0.47
SGCE-202ENST00000415788 CENPEQ02224 2701 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 HTR3BO95264 441 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 SERPINA2P20848 420 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 RBMXP38159 391 aaKnown RBP12.08□□□□□ -0.48
SGCE-202ENST00000415788 NPY4RP50391 375 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 HOXA4Q00056 320 aaPredicted RBP12.08□□□□□ -0.48
SGCE-202ENST00000415788 ZNF146Q15072 292 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 RHEBQ15382 184 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 STUMQ69YW2 141 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 OSR2Q8N2R0 312 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 WFDC11Q8NEX6 87 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 OR56B1Q8NGI3 324 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 OR51T1Q8NGJ9 327 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 TMPRSS5Q9H3S3 457 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 FAM212BQ9NTI7 297 aaPredicted RBP12.08□□□□□ -0.48
SGCE-202ENST00000415788 MIOXQ9UGB7 285 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 ANKRD17O75179 2603 aaKnown RBP12.08□□□□□ -0.48
SGCE-202ENST00000415788 IGHV3OR15-7A0A075B7D8 119 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 NKX6-3A6NJ46 265 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 K7EPK0 472 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 PSG2P11465 335 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 RAB5AP20339 215 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 USF1P22415 310 aaPredicted RBP12.08□□□□□ -0.48
SGCE-202ENST00000415788 RPL12P30050 165 aaKnown RBP12.08□□□□□ -0.48
SGCE-202ENST00000415788 MAS1LP35410 378 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 S100A10P60903 97 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 LINC00596Q86U02 117 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 C1QL4Q86Z23 238 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 BATF2Q8N1L9 274 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 FAM71E2Q8N5Q1 922 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 UBAC2Q8NBM4 344 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 RAB39BQ96DA2 213 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 POM121Q96HA1 1249 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 URM1Q9BTM9 101 aaKnown RBP12.08□□□□□ -0.48
SGCE-202ENST00000415788 PLEKHA2Q9HB19 425 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.08□□□□□ -0.48
SGCE-202ENST00000415788 KAAG1Q9UBP8 84 aa12.08□□□□□ -0.48
SGCE-202ENST00000415788 C7orf77A4D0Y5 90 aa12.07□□□□□ -0.48
SGCE-202ENST00000415788 C9JQL5 133 aa12.07□□□□□ -0.48
SGCE-202ENST00000415788 AP4M1O00189 453 aa12.07□□□□□ -0.48
SGCE-202ENST00000415788 TNFRSF13BO14836 293 aaPredicted RBP12.07□□□□□ -0.48
SGCE-202ENST00000415788 CRTAPO75718 401 aaPredicted RBP12.07□□□□□ -0.48
SGCE-202ENST00000415788 TSPAN15O95858 294 aa12.07□□□□□ -0.48
SGCE-202ENST00000415788 GYPAP02724 150 aa12.07□□□□□ -0.48
SGCE-202ENST00000415788 FBP1P09467 338 aa12.07□□□□□ -0.48
SGCE-202ENST00000415788 AMY2BP19961 511 aa12.07□□□□□ -0.48
SGCE-202ENST00000415788 SNCAP37840 140 aa12.07□□□□□ -0.48
SGCE-202ENST00000415788 LOXL1Q08397 574 aaPredicted RBP12.07□□□□□ -0.48
SGCE-202ENST00000415788 IL13RA2Q14627 380 aa12.07□□□□□ -0.48
SGCE-202ENST00000415788 AWAT1Q58HT5 328 aa12.07□□□□□ -0.48
SGCE-202ENST00000415788 SECTM1Q8WVN6 248 aa12.07□□□□□ -0.48
SGCE-202ENST00000415788 ARV1Q9H2C2 271 aa12.07□□□□□ -0.48
SGCE-202ENST00000415788 ZNF665Q9H7R5 613 aa12.07□□□□□ -0.48
SGCE-202ENST00000415788 PATZ1Q9HBE1 687 aaKnown RBP12.07□□□□□ -0.48
SGCE-202ENST00000415788 IGKV1D-17A0A075B6S4 117 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 SH2D1BO14796 132 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 RPS2P15880 293 aaKnown RBP12.06□□□□□ -0.48
SGCE-202ENST00000415788 RAB5CP51148 216 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 RBM11P57052 281 aaKnown RBP12.06□□□□□ -0.48
SGCE-202ENST00000415788 ARL6IP1Q15041 203 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 CLDND2Q8NHS1 167 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 TMEM59Q9BXS4 323 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 C14orf166Q9Y224 244 aaKnown RBP12.06□□□□□ -0.48
SGCE-202ENST00000415788 ST3GAL6Q9Y274 331 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 CSMD2Q7Z408 3487 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 A0A0A6YYD4 124 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 IGHV4-61A0A0C4DH41 118 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 FAM90A10PA6NDY2 464 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 FAM90A18PA6NE21 464 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 FAM90A16PA6NEW6 464 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 FAM90A20PA6NIJ5 464 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms