RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 POM121Q96HA1 1249 aa12.94□□□□□ -0.34
SHMT2-202ENST00000414700 SMIM8Q96KF7 97 aa12.94□□□□□ -0.34
SHMT2-202ENST00000414700 OCSTAMPQ9BR26 566 aa12.94□□□□□ -0.34
SHMT2-202ENST00000414700 SHPKQ9UHJ6 478 aa12.94□□□□□ -0.34
SHMT2-202ENST00000414700 VSIG4Q9Y279 399 aa12.94□□□□□ -0.34
SHMT2-202ENST00000414700 NAV2Q8IVL1 2488 aa12.94□□□□□ -0.34
SHMT2-202ENST00000414700 PPIAL4EA0A075B759 164 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 C9orf170A2RU37 121 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 PPIAL4DF5H284 164 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 PPIAL4FP0DN26 164 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 LMO1P25800 156 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 PPP1R1AQ13522 171 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 MEF2DQ14814 521 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 SCGB2B2Q4G0G5 96 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 OR52W1Q6IF63 320 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 OR4S1Q8NGB4 309 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 PLPPR1Q8TBJ4 325 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 PFDN5Q99471 154 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 HRH4Q9H3N8 390 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 CHMP1AQ9HD42 196 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-202ENST00000414700 PPIAL4AQ9Y536 164 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 AP4M1O00189 453 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 ZNF737O75373 536 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 CD5P06127 495 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 RAB2AP61019 212 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 HMGN3Q15651 99 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 FGFRL1Q8N441 504 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 ZDHHC22Q8N966 263 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 CCL13Q99616 98 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 SLC6A7Q99884 636 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 TUBA4BQ9H853 241 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 SPACA1Q9HBV2 294 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 SLC2A8Q9NY64 477 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 CACFD1Q9UGQ2 172 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 KPTNQ9Y664 436 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 POMT1Q9Y6A1 747 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 DSCAML1Q8TD84 2053 aa12.93□□□□□ -0.34
SHMT2-202ENST00000414700 IGKV1D-8A0A087WSZ0 117 aa12.92□□□□□ -0.34
SHMT2-202ENST00000414700 FBXO24O75426 580 aa12.92□□□□□ -0.34
SHMT2-202ENST00000414700 GPX4P36969 197 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-202ENST00000414700 OR3A1P47881 315 aa12.92□□□□□ -0.34
SHMT2-202ENST00000414700 DEFA6Q01524 100 aa12.92□□□□□ -0.34
SHMT2-202ENST00000414700 FAHD2BQ6P2I3 314 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-202ENST00000414700 C5orf24Q7Z6I8 188 aa12.92□□□□□ -0.34
SHMT2-202ENST00000414700 FAM216BQ8N7L0 139 aa12.92□□□□□ -0.34
SHMT2-202ENST00000414700 FAHD2AQ96GK7 314 aa12.92□□□□□ -0.34
SHMT2-202ENST00000414700 PRRT1Q99946 306 aa12.92□□□□□ -0.34
SHMT2-202ENST00000414700 IFNL4K9M1U5 179 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 TMPRSS2O15393 492 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 PPIHO43447 177 aaKnown RBP12.91□□□□□ -0.34
SHMT2-202ENST00000414700 KCNAB3O43448 404 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 FCN3O75636 299 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 IGHV4-39P01824 125 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 NQO2P16083 231 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 RAB5CP51148 216 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 EFNA4P52798 201 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 LYPD2Q6UXB3 125 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 TPRX1Q8N7U7 411 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 GAFA1Q96PS6 74 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 ST6GALNAC5Q9BVH7 336 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 RPS10P5Q9NQ39 176 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 ZNF701Q9NV72 531 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-202ENST00000414700 TRAV39A0A0B4J263 110 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 TRAV38-1A0A0B4J264 116 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 RAB5AP20339 215 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 GLP1RP43220 463 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 IL13RA1P78552 427 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 AESQ08117 197 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 ARL6IP1Q15041 203 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 C9orf152Q5JTZ5 239 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 ZNF788Q6ZQV5 615 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 ZNF525Q8N782 197 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 MALSU1Q96EH3 234 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 GGACTQ9BVM4 153 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 NMES1Q9C002 83 aa12.91□□□□□ -0.34
SHMT2-202ENST00000414700 MALRD1Q5VYJ5 2156 aa12.9□□□□□ -0.34
SHMT2-202ENST00000414700 FAM157AC9JC47 383 aa12.9□□□□□ -0.34
SHMT2-202ENST00000414700 NAPSAO96009 420 aa12.9□□□□□ -0.34
SHMT2-202ENST00000414700 FCGR3AP08637 254 aa12.9□□□□□ -0.34
SHMT2-202ENST00000414700 BTF3P20290 206 aaKnown RBP12.9□□□□□ -0.34
SHMT2-202ENST00000414700 CYCSP99999 105 aaKnown RBP12.9□□□□□ -0.34
SHMT2-202ENST00000414700 AKIRIN2Q53H80 203 aa12.9□□□□□ -0.34
SHMT2-202ENST00000414700 DHRS11Q6UWP2 260 aa12.9□□□□□ -0.34
SHMT2-202ENST00000414700 ETV3LQ6ZN32 361 aa12.9□□□□□ -0.34
SHMT2-202ENST00000414700 OR4K15Q8NH41 348 aa12.9□□□□□ -0.34
SHMT2-202ENST00000414700 RRNAD1Q96FB5 475 aaKnown RBP12.9□□□□□ -0.34
SHMT2-202ENST00000414700 SDSLQ96GA7 329 aa12.9□□□□□ -0.34
SHMT2-202ENST00000414700 COQ2Q96H96 371 aa12.9□□□□□ -0.34
SHMT2-202ENST00000414700 KIRREL1Q96J84 757 aa12.9□□□□□ -0.34
SHMT2-202ENST00000414700 RNF126Q9BV68 326 aa12.9□□□□□ -0.34
SHMT2-202ENST00000414700 C5orf51A6NDU8 294 aa12.89□□□□□ -0.35
SHMT2-202ENST00000414700 TNFRSF13BO14836 293 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-202ENST00000414700 CA11O75493 328 aa12.89□□□□□ -0.35
SHMT2-202ENST00000414700 DVL1P1P54792 670 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-202ENST00000414700 EIF5AP63241 154 aaKnown RBP12.89□□□□□ -0.35
SHMT2-202ENST00000414700 MRPS11P82912 194 aaKnown RBP12.89□□□□□ -0.35
SHMT2-202ENST00000414700 KCTD9Q7L273 389 aa12.89□□□□□ -0.35
SHMT2-202ENST00000414700 MRPL30Q8TCC3 161 aaKnown RBP12.89□□□□□ -0.35
SHMT2-202ENST00000414700 TOLLIPQ9H0E2 274 aa12.89□□□□□ -0.35
SHMT2-202ENST00000414700 ARHGAP32A7KAX9 2087 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms