RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 J3QT63 122 aa14.9□□□□□ -0.02
SDCBP-202ENST00000413219 NGFP01138 241 aa14.9□□□□□ -0.02
SDCBP-202ENST00000413219 ZNF16P17020 682 aaPredicted RBP14.9□□□□□ -0.02
SDCBP-202ENST00000413219 IDH3GP51553 393 aaPredicted RBP14.9□□□□□ -0.02
SDCBP-202ENST00000413219 FGFRL1Q8N441 504 aa14.9□□□□□ -0.02
SDCBP-202ENST00000413219 BTF3L4Q96K17 158 aa14.9□□□□□ -0.02
SDCBP-202ENST00000413219 OR6C3Q9NZP0 311 aa14.9□□□□□ -0.02
SDCBP-202ENST00000413219 LAMA1P25391 3075 aa14.9□□□□□ -0.02
SDCBP-202ENST00000413219 NCKAP5O14513 1909 aa14.9□□□□□ -0.02
SDCBP-202ENST00000413219 B4E171 279 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 CLDN1O95832 211 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 GYPAP02724 150 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 TSPAN7P41732 249 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 LCN2P80188 198 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 SLC10A1Q14973 349 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 MSMO1Q15800 293 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 OR8G2PQ6IF36 304 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 DRAM1Q8N682 238 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 OR10G9Q8NGN4 311 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 OR10G7Q8NGN6 311 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 NEIL1Q96FI4 390 aaPredicted RBP14.89□□□□□ -0.03
SDCBP-202ENST00000413219 LURAP1Q96LR2 239 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 SLC25A22Q9H936 323 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 CCL4P13236 92 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 COX5AP20674 150 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 CXCL12P48061 93 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 PLP2Q04941 152 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 ZBTB34Q8NCN2 500 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 OR4F5Q8NH21 305 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 OR4F4Q96R69 305 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 ELOVL1Q9BW60 279 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 CACNA1EQ15878 2313 aa14.89□□□□□ -0.03
SDCBP-202ENST00000413219 A0A1W2PPQ1 181 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 ZNF503-AS2A6NEH8 195 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 WDR1O75083 606 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 Q0VFX4 171 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 HLA-BQ31612 363 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 C9orf135Q5VTT2 229 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 KCNIP4Q6PIL6 250 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 PPP1R32Q7Z5V6 425 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 DDA1Q9BW61 102 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 MRPL37Q9BZE1 423 aaKnown RBP14.88□□□□□ -0.03
SDCBP-202ENST00000413219 MBNL3Q9NUK0 354 aaKnown RBP14.88□□□□□ -0.03
SDCBP-202ENST00000413219 TRAPPC2LQ9UL33 140 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 WIPI2Q9Y4P8 454 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 SDK2Q58EX2 2172 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 VCANP13611 3396 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 NTN3O00634 580 aaPredicted RBP14.88□□□□□ -0.03
SDCBP-202ENST00000413219 SYNGR4O95473 234 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 IL18BPO95998 194 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 P0C879 139 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 Q8IYB0 196 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 BOKQ9UMX3 212 aaPredicted RBP14.88□□□□□ -0.03
SDCBP-202ENST00000413219 FUT9Q9Y231 359 aa14.88□□□□□ -0.03
SDCBP-202ENST00000413219 PINLYPA6NC86 204 aa14.87□□□□□ -0.03
SDCBP-202ENST00000413219 ZNF705GA8MUZ8 300 aaPredicted RBP14.87□□□□□ -0.03
SDCBP-202ENST00000413219 ZNHIT1O43257 154 aa14.87□□□□□ -0.03
SDCBP-202ENST00000413219 CD99P14209 185 aa14.87□□□□□ -0.03
SDCBP-202ENST00000413219 RTP5Q14D33 572 aa14.87□□□□□ -0.03
SDCBP-202ENST00000413219 ZNF124Q15973 351 aa14.87□□□□□ -0.03
SDCBP-202ENST00000413219 IQCJQ1A5X6 159 aa14.87□□□□□ -0.03
SDCBP-202ENST00000413219 FFAR4Q5NUL3 377 aa14.87□□□□□ -0.03
SDCBP-202ENST00000413219 PMS2P5A8MQ11 134 aa14.86□□□□□ -0.03
SDCBP-202ENST00000413219 LILRA1O75019 489 aa14.86□□□□□ -0.03
SDCBP-202ENST00000413219 CYB561P49447 251 aa14.86□□□□□ -0.03
SDCBP-202ENST00000413219 FOXG1P55316 489 aaPredicted RBP14.86□□□□□ -0.03
SDCBP-202ENST00000413219 USF2Q15853 346 aaPredicted RBP14.86□□□□□ -0.03
SDCBP-202ENST00000413219 VWC2Q2TAL6 325 aa14.86□□□□□ -0.03
SDCBP-202ENST00000413219 TMEM37Q8WXS4 190 aa14.86□□□□□ -0.03
SDCBP-202ENST00000413219 UBE2ZQ9H832 354 aaPredicted RBP14.86□□□□□ -0.03
SDCBP-202ENST00000413219 A0A1W2PR80 420 aa14.86□□□□□ -0.03
SDCBP-202ENST00000413219 RHBDL1O75783 438 aa14.86□□□□□ -0.03
SDCBP-202ENST00000413219 LHX2P50458 406 aa14.86□□□□□ -0.03
SDCBP-202ENST00000413219 TUSC5Q8IXB3 177 aa14.86□□□□□ -0.03
SDCBP-202ENST00000413219 OR10P1Q8NGE3 313 aa14.86□□□□□ -0.03
SDCBP-202ENST00000413219 IMMP2LQ96T52 175 aa14.86□□□□□ -0.03
SDCBP-202ENST00000413219 NEU1Q99519 415 aa14.86□□□□□ -0.03
SDCBP-202ENST00000413219 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.86□□□□□ -0.03
SDCBP-202ENST00000413219 CHD3Q12873 2000 aaKnown RBP14.86□□□□□ -0.03
SDCBP-202ENST00000413219 TRAV39A0A0B4J263 110 aa14.85□□□□□ -0.03
SDCBP-202ENST00000413219 LRRC30A6NM36 301 aa14.85□□□□□ -0.03
SDCBP-202ENST00000413219 MLNRO43193 412 aa14.85□□□□□ -0.03
SDCBP-202ENST00000413219 OR2H2O95918 312 aa14.85□□□□□ -0.03
SDCBP-202ENST00000413219 TMEM249Q2WGJ8 235 aa14.85□□□□□ -0.03
SDCBP-202ENST00000413219 PRR18Q8N4B5 295 aa14.85□□□□□ -0.03
SDCBP-202ENST00000413219 GBGT1Q8N5D6 347 aa14.85□□□□□ -0.03
SDCBP-202ENST00000413219 ZNF645Q8N7E2 425 aa14.85□□□□□ -0.03
SDCBP-202ENST00000413219 ZNF709Q8N972 641 aa14.85□□□□□ -0.03
SDCBP-202ENST00000413219 CIB3Q96Q77 187 aaPredicted RBP14.85□□□□□ -0.03
SDCBP-202ENST00000413219 HMGB3O15347 200 aaKnown RBP14.85□□□□□ -0.03
SDCBP-202ENST00000413219 PAGE4O60829 102 aa14.85□□□□□ -0.03
SDCBP-202ENST00000413219 SERPINA7P05543 415 aa14.85□□□□□ -0.03
SDCBP-202ENST00000413219 SNRPCP09234 159 aaKnown RBP14.85□□□□□ -0.03
SDCBP-202ENST00000413219 WNT5AP41221 380 aa14.85□□□□□ -0.03
SDCBP-202ENST00000413219 CNN1P51911 297 aaKnown RBP14.85□□□□□ -0.03
SDCBP-202ENST00000413219 ERVK11-1P61568 191 aa14.85□□□□□ -0.03
SDCBP-202ENST00000413219 NUTF2P61970 127 aaKnown RBP14.85□□□□□ -0.03
SDCBP-202ENST00000413219 GATAD1Q8WUU5 269 aa14.85□□□□□ -0.03
SDCBP-202ENST00000413219 APH1AQ96BI3 265 aa14.85□□□□□ -0.03
SDCBP-202ENST00000413219 RTL8AQ9BWD3 113 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms