RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 PHOX2AO14813 284 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 CYB5BO43169 146 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 SCAF4O95104 1147 aaKnown RBP11.38□□□□□ -0.59
COL6A2-204ENST00000409416 RAB5CP51148 216 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 RPS23P62266 143 aaKnown RBP11.38□□□□□ -0.59
COL6A2-204ENST00000409416 DLK1P80370 383 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 OR4D5Q8NGN0 318 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 NIPSNAP3BQ9BS92 247 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 SSTR5P35346 364 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 MPV17P39210 176 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 CLDN18P56856 261 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 SRPXP78539 464 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 COMMD1Q8N668 190 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 RPUSD4Q96CM3 377 aaKnown RBP11.38□□□□□ -0.59
COL6A2-204ENST00000409416 CDX4O14627 284 aaPredicted RBP11.38□□□□□ -0.59
COL6A2-204ENST00000409416 TMEM50AO95807 157 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 IGHV3-48P01763 117 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 CD59P13987 128 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 RAC2P15153 192 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 GNG3P63215 75 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 FOXL2NBQ6ZUU3 175 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 CCDC54Q8NEL0 328 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 LFNGQ8NES3 379 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 SPRR3Q9UBC9 169 aa11.38□□□□□ -0.59
COL6A2-204ENST00000409416 POLQO75417 2590 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 K7N7A8 449 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 IGHEP01854 428 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 MMP9P14780 707 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 EGR1P18146 543 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 WNT5AP41221 380 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 WFDC8Q8IUA0 241 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 CLN8Q9UBY8 286 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 TGIF2-C20orf24A0A0A6YYL0 155 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 C5orf52A6NGY3 159 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 ZNF705GA8MUZ8 300 aaPredicted RBP11.37□□□□□ -0.59
COL6A2-204ENST00000409416 CDS2O95674 445 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 ARL6IP6Q8N6S5 226 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 TMEM178AQ8NBL3 297 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 Q9N2K0 584 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 ARHGAP32A7KAX9 2087 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 HERPUD1Q15011 391 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 CDPF1Q6NVV7 123 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 LRP11Q86VZ4 500 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 NANOS1Q8WY41 292 aaKnown RBP11.37□□□□□ -0.59
COL6A2-204ENST00000409416 SLC25A22Q9H936 323 aa11.37□□□□□ -0.59
COL6A2-204ENST00000409416 USP9YO00507 2555 aaPredicted RBP11.36□□□□□ -0.59
COL6A2-204ENST00000409416 KIR2DS1A0A191URI9 304 aa11.36□□□□□ -0.59
COL6A2-204ENST00000409416 AP4M1O00189 453 aa11.36□□□□□ -0.59
COL6A2-204ENST00000409416 KIR2DS4P43632 304 aa11.36□□□□□ -0.59
COL6A2-204ENST00000409416 KIR2DS1Q14954 304 aa11.36□□□□□ -0.59
COL6A2-204ENST00000409416 OR8B8Q15620 311 aa11.36□□□□□ -0.59
COL6A2-204ENST00000409416 A0A0G2JRQ6 117 aa11.36□□□□□ -0.59
COL6A2-204ENST00000409416 FTH1P19P0C7X4 201 aa11.36□□□□□ -0.59
COL6A2-204ENST00000409416 ZNF25P17030 456 aaPredicted RBP11.36□□□□□ -0.59
COL6A2-204ENST00000409416 WT1P19544 449 aaPredicted RBP11.36□□□□□ -0.59
COL6A2-204ENST00000409416 VDAC1P21796 283 aa11.36□□□□□ -0.59
COL6A2-204ENST00000409416 TLE4Q04727 773 aa11.36□□□□□ -0.59
COL6A2-204ENST00000409416 BAXQ07812 192 aa11.36□□□□□ -0.59
COL6A2-204ENST00000409416 ZNF610Q8N9Z0 462 aa11.36□□□□□ -0.59
COL6A2-204ENST00000409416 MISP3Q96FF7 219 aa11.36□□□□□ -0.59
COL6A2-204ENST00000409416 LYRM2Q9NU23 88 aaPredicted RBP11.36□□□□□ -0.59
COL6A2-204ENST00000409416 DECR2Q9NUI1 292 aa11.36□□□□□ -0.59
COL6A2-204ENST00000409416 PITX3O75364 302 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 OR2H2O95918 312 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 CD55P08174 381 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 OR8U8P0C7N1 319 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 PMELP40967 661 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 GLIPR1P48060 266 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 EIF3IQ13347 325 aaKnown RBP11.35□□□□□ -0.59
COL6A2-204ENST00000409416 BATFQ16520 125 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 ZNF573Q86YE8 665 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 C14orf144Q96I85 54 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 TMPRSS5Q9H3S3 457 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 ZNF665Q9H7R5 613 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 DLL3Q9NYJ7 618 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 CCDC168Q8NDH2 2452 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 SMG1Q96Q15 3661 aaKnown RBP11.35□□□□□ -0.59
COL6A2-204ENST00000409416 PGLYRP1O75594 196 aaPredicted RBP11.35□□□□□ -0.59
COL6A2-204ENST00000409416 CST9LP1Q5W188 147 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 FBXW9Q5XUX1 488 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 TMEM42Q69YG0 159 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 SCCPDHQ8NBX0 429 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 ZNRF1Q8ND25 227 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 FGF23Q9GZV9 251 aaPredicted RBP11.35□□□□□ -0.59
COL6A2-204ENST00000409416 METRNQ9UJH8 293 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 ZNF292O60281 2723 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 IGKV1-6A0A0C4DH72 117 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 IFNA10P01566 189 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 COL8A2P25067 703 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 TAS2R60P59551 318 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 FGF12P61328 243 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 FAM185AQ8N0U4 392 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 LRTM2Q8N967 370 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 PLPPR1Q8TBJ4 325 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 GPR146Q96CH1 333 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 PSENENQ9NZ42 101 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 DMRT1Q9Y5R6 373 aa11.35□□□□□ -0.59
COL6A2-204ENST00000409416 REG1BP48304 166 aa11.34□□□□□ -0.59
COL6A2-204ENST00000409416 NUBP1P53384 320 aa11.34□□□□□ -0.59
COL6A2-204ENST00000409416 ZNF787Q6DD87 383 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms