RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 MUC1P15941 1255 aaPredicted RBP20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 RPL30P62888 115 aaKnown RBP20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 NCMAPQ5T1S8 102 aa20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 Q6ZRM9 215 aa20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 SAT2Q96F10 170 aaPredicted RBP20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 EGLN1Q9GZT9 426 aa20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 ZNF665Q9H7R5 613 aa20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 RAB9BQ9NP90 201 aa20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 ST8SIA5O15466 376 aa20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 CLDN1O95832 211 aa20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 GYPAP02724 150 aa20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 SELLP14151 372 aa20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 TLE1Q04724 770 aa20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 BTNL3Q6UXE8 466 aa20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 TMEM252Q8N6L7 170 aa20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 GAFA1Q96PS6 74 aa20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 RNF115Q9Y4L5 304 aa20.51■□□□□ 0.87
DNMT3A-206ENST00000406659 SULT1A2P50226 295 aa20.5■□□□□ 0.87
DNMT3A-206ENST00000406659 MORN2Q502X0 79 aa20.5■□□□□ 0.87
DNMT3A-206ENST00000406659 ZNF66Q6ZN08 573 aa20.5■□□□□ 0.87
DNMT3A-206ENST00000406659 FGFRL1Q8N441 504 aa20.5■□□□□ 0.87
DNMT3A-206ENST00000406659 TCTEX1D1Q8N7M0 179 aa20.5■□□□□ 0.87
DNMT3A-206ENST00000406659 PLPPR2Q96GM1 343 aa20.5■□□□□ 0.87
DNMT3A-206ENST00000406659 CCL13Q99616 98 aa20.5■□□□□ 0.87
DNMT3A-206ENST00000406659 CALYQ9NYX4 217 aa20.5■□□□□ 0.87
DNMT3A-206ENST00000406659 SHISA9B4DS77 424 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 F2RL2O00254 374 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 YPEL1O60688 119 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 CHRNB4P30926 498 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 Q3ZCU0 254 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 OR2B11Q5JQS5 317 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 TEX36Q5VZQ5 186 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 TGIF2LYQ8IUE0 185 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 ZCCHC24Q8N2G6 241 aaKnown RBP20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 FAM216AQ8WUB2 273 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 YPEL2Q96QA6 119 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 RAB40CQ96S21 281 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 HSD17B10Q99714 261 aaKnown RBP20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 GINS3Q9BRX5 216 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 DYSFO75923 2080 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 SPTBN4Q9H254 2564 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 FAM90A27PA6NNH2 459 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 MED6O75586 246 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 ATG12O94817 140 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 TMEM50AO95807 157 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 OMGP23515 440 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 GPR12P47775 334 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 RPL23AP62750 156 aaKnown RBP20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 FAM209AQ5JX71 171 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 ZNF788Q6ZQV5 615 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 SPAG16Q8N0X2 631 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 AGMATQ9BSE5 352 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 FAM234AQ9H0X4 552 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 NDRG3Q9UGV2 375 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 MMP24Q9Y5R2 645 aa20.49■□□□□ 0.87
DNMT3A-206ENST00000406659 RAB19A4D1S5 217 aa20.48■□□□□ 0.87
DNMT3A-206ENST00000406659 KIAA1324LA8MWY0 1029 aaPredicted RBP20.48■□□□□ 0.87
DNMT3A-206ENST00000406659 RAMP3O60896 148 aa20.48■□□□□ 0.87
DNMT3A-206ENST00000406659 C1QTNF9P0C862 333 aa20.48■□□□□ 0.87
DNMT3A-206ENST00000406659 ZNF816Q0VGE8 651 aaPredicted RBP20.48■□□□□ 0.87
DNMT3A-206ENST00000406659 DUX4L9Q6RFH8 374 aaPredicted RBP20.48■□□□□ 0.87
DNMT3A-206ENST00000406659 SMIM8Q96KF7 97 aa20.48■□□□□ 0.87
DNMT3A-206ENST00000406659 SAP30LQ9HAJ7 183 aa20.48■□□□□ 0.87
DNMT3A-206ENST00000406659 FAM212BQ9NTI7 297 aaPredicted RBP20.48■□□□□ 0.87
DNMT3A-206ENST00000406659 DCAF16Q9NXF7 216 aa20.48■□□□□ 0.87
DNMT3A-206ENST00000406659 DSCAMO60469 2012 aa20.47■□□□□ 0.87
DNMT3A-206ENST00000406659 TRGV10A0A0A0MS01 117 aa20.47■□□□□ 0.87
DNMT3A-206ENST00000406659 C17orf98A8MV24 154 aa20.47■□□□□ 0.87
DNMT3A-206ENST00000406659 NUDT19A8MXV4 375 aa20.47■□□□□ 0.87
DNMT3A-206ENST00000406659 E7EQL1 145 aa20.47■□□□□ 0.87
DNMT3A-206ENST00000406659 CD3EP07766 207 aa20.47■□□□□ 0.87
DNMT3A-206ENST00000406659 SEC11BP0C7V7 166 aa20.47■□□□□ 0.87
DNMT3A-206ENST00000406659 PAX9P55771 341 aa20.47■□□□□ 0.87
DNMT3A-206ENST00000406659 BLOC1S1P78537 153 aa20.47■□□□□ 0.87
DNMT3A-206ENST00000406659 BAXQ07812 192 aa20.47■□□□□ 0.87
DNMT3A-206ENST00000406659 CLINT1Q14677 625 aa20.47■□□□□ 0.87
DNMT3A-206ENST00000406659 NKX6-3A6NJ46 265 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 CGB3P0DN86 165 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 CGB7P0DN87 165 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 LOXL3P58215 753 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 RNASE6Q93091 150 aaKnown RBP20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 COQ3Q9NZJ6 369 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 SIGLEC5O15389 551 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 SYNGR2O43760 224 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 CST7O76096 145 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 ZNF266Q14584 549 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 MST1LQ2TV78 715 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 FBXL19-AS1Q494R0 122 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 PXDC1Q5TGL8 231 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 UQCC3Q6UW78 93 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 DMRTC2Q8IXT2 367 aaPredicted RBP20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 C1orf87Q8N0U7 546 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 FAM216BQ8N7L0 139 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 DYNLRB1Q9NP97 96 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 MMP26Q9NRE1 261 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 PLA2G2EQ9NZK7 142 aa20.46■□□□□ 0.87
DNMT3A-206ENST00000406659 TRAV38-1A0A0B4J264 116 aa20.45■□□□□ 0.86
DNMT3A-206ENST00000406659 KBTBD11-OT1A0A1B0GTJ5 212 aa20.45■□□□□ 0.86
DNMT3A-206ENST00000406659 B8ZZF3 427 aa20.45■□□□□ 0.86
DNMT3A-206ENST00000406659 S1PR2O95136 353 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms