RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 ZBTB25P24278 435 aa10.46□□□□□ -0.73
SDF4-203ENST00000403997 CNTFRP26992 372 aa10.46□□□□□ -0.73
SDF4-203ENST00000403997 CEACAM6P40199 344 aa10.46□□□□□ -0.73
SDF4-203ENST00000403997 THBS3P49746 956 aa10.46□□□□□ -0.73
SDF4-203ENST00000403997 OR10A3P58181 314 aa10.46□□□□□ -0.73
SDF4-203ENST00000403997 HLA-DRB3P79483 266 aa10.46□□□□□ -0.73
SDF4-203ENST00000403997 PLA2G7Q13093 441 aa10.46□□□□□ -0.73
SDF4-203ENST00000403997 RPL39P5Q59GN2 51 aa10.46□□□□□ -0.73
SDF4-203ENST00000403997 CXorf66Q5JRM2 361 aaPredicted RBP10.46□□□□□ -0.73
SDF4-203ENST00000403997 PLAC9Q5JTB6 97 aa10.46□□□□□ -0.73
SDF4-203ENST00000403997 ZNF695Q8IW36 515 aa10.46□□□□□ -0.73
SDF4-203ENST00000403997 MRPL41Q8IXM3 137 aaKnown RBP10.46□□□□□ -0.73
SDF4-203ENST00000403997 LINC00482Q8N8I6 264 aa10.46□□□□□ -0.73
SDF4-203ENST00000403997 MRAPQ8TCY5 172 aa10.46□□□□□ -0.73
SDF4-203ENST00000403997 PARP12Q9H0J9 701 aaKnown RBP10.46□□□□□ -0.73
SDF4-203ENST00000403997 Q9H521 79 aa10.46□□□□□ -0.73
SDF4-203ENST00000403997 C12orf4Q9NQ89 552 aa10.46□□□□□ -0.73
SDF4-203ENST00000403997 NDUFB11Q9NX14 153 aa10.46□□□□□ -0.73
SDF4-203ENST00000403997 OR1A1Q9P1Q5 309 aa10.46□□□□□ -0.73
SDF4-203ENST00000403997 ZNF107Q9UII5 783 aaPredicted RBP10.46□□□□□ -0.73
SDF4-203ENST00000403997 SHISA3A0PJX4 238 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 IFITM5A6NNB3 132 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 LDLRAD4O15165 306 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 DUS4LO95620 317 aaKnown RBP10.45□□□□□ -0.74
SDF4-203ENST00000403997 RPLP1P05386 114 aaKnown RBP10.45□□□□□ -0.74
SDF4-203ENST00000403997 RAB3BP20337 219 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 SLC6A1P30531 599 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 MYCNOSP40205 109 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 GABARAPL2P60520 117 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 MRPS15P82914 257 aaKnown RBP10.45□□□□□ -0.74
SDF4-203ENST00000403997 FOXE3Q13461 319 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 C22orf42Q6IC83 251 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 FAM71F2Q6NXP2 309 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 CD200R1LQ6Q8B3 271 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 ETV3LQ6ZN32 361 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 LCNL1Q6ZST4 164 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 RAB3CQ96E17 227 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 ABHD14BQ96IU4 210 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 DUX3Q96PT4 197 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 AURKAIP1Q9NWT8 199 aaPredicted RBP10.45□□□□□ -0.74
SDF4-203ENST00000403997 KIAA1456Q9P272 454 aa10.45□□□□□ -0.74
SDF4-203ENST00000403997 TRDCB7Z8K6 153 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 ITGB1BP1O14713 200 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 NBR2O15453 112 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 ELANEP08246 267 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 CD3GP09693 182 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 CT45A6P0DMU7 189 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 CT45A5P0DMU8 189 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 CT45A7P0DMV0 189 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 OR5H8P0DN80 308 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 GALP22466 123 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 PSMB9P28065 219 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 C5orf64Q2M2E5 130 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 LIN54Q6MZP7 749 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 FAM131AQ6UXB0 335 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 GLDNQ6ZMI3 551 aaPredicted RBP10.44□□□□□ -0.74
SDF4-203ENST00000403997 EDARADDQ8WWZ3 215 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 KCTD7Q96MP8 289 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 C11orf54Q9H0W9 315 aaPredicted RBP10.44□□□□□ -0.74
SDF4-203ENST00000403997 GHITMQ9H3K2 345 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 RNF150Q9ULK6 438 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 WSB1Q9Y6I7 421 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 NBEAL2Q6ZNJ1 2754 aa10.44□□□□□ -0.74
SDF4-203ENST00000403997 H7C2Y5 167 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 CCL24O00175 119 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 IGHG4P01861 327 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 IGF1P05019 195 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 GSTP1P09211 210 aaKnown RBP10.43□□□□□ -0.74
SDF4-203ENST00000403997 GADD45AP24522 165 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 MC5RP33032 325 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 RAB25P57735 213 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 MOGAT2Q3SYC2 334 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 UBE2UQ5VVX9 321 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 SPARTQ8N0X7 666 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 NPBQ8NG41 125 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 OR10R2Q8NGX6 335 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 P2RX4Q99571 388 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 AGMATQ9BSE5 352 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 YTHDF1Q9BYJ9 559 aaKnown RBP10.43□□□□□ -0.74
SDF4-203ENST00000403997 GPR61Q9BZJ8 451 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 OR51J1Q9H342 316 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 PARP11Q9NR21 331 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 ZNF221Q9UK13 617 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 KCNK7Q9Y2U2 307 aa10.43□□□□□ -0.74
SDF4-203ENST00000403997 A0A075B6Q4 140 aa10.42□□□□□ -0.74
SDF4-203ENST00000403997 IGHV7-81A0A0B4J1V7 117 aa10.42□□□□□ -0.74
SDF4-203ENST00000403997 A0A0B4J203 849 aa10.42□□□□□ -0.74
SDF4-203ENST00000403997 IGKV1-6A0A0C4DH72 117 aa10.42□□□□□ -0.74
SDF4-203ENST00000403997 SMIM30A4D0T7 59 aa10.42□□□□□ -0.74
SDF4-203ENST00000403997 METTL21EPA6NDL7 271 aa10.42□□□□□ -0.74
SDF4-203ENST00000403997 OR5H14A6NHG9 310 aa10.42□□□□□ -0.74
SDF4-203ENST00000403997 G3V318 75 aa10.42□□□□□ -0.74
SDF4-203ENST00000403997 H0YJW9 148 aa10.42□□□□□ -0.74
SDF4-203ENST00000403997 ATP6V0E1O15342 81 aa10.42□□□□□ -0.74
SDF4-203ENST00000403997 HLA-DRB1P01911 266 aa10.42□□□□□ -0.74
SDF4-203ENST00000403997 GNB3P16520 340 aa10.42□□□□□ -0.74
SDF4-203ENST00000403997 RAB6AP20340 208 aa10.42□□□□□ -0.74
SDF4-203ENST00000403997 HOXD3P31249 432 aaPredicted RBP10.42□□□□□ -0.74
SDF4-203ENST00000403997 CDX1P47902 265 aaPredicted RBP10.42□□□□□ -0.74
SDF4-203ENST00000403997 CFHR3Q02985 330 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms