RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 ABRACLQ9P1F3 81 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 MGAT4AQ9UM21 535 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 UBE2QL1A1L167 161 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 C15orf65H3BRN8 121 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 CCL24O00175 119 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 SPINT2O43291 252 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 GABARAPO95166 117 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 SERPINB10P48595 397 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 HNF4GQ14541 408 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 IDNKQ5T6J7 187 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 GPR107Q5VW38 600 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 STEAP3Q658P3 488 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 C6orf201Q7Z4U5 140 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 MOB3BQ86TA1 216 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 GAPTQ8N292 157 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 OR5M8Q8NGP6 311 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 ST6GALNAC6Q969X2 333 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 KCTD12Q96CX2 325 aaKnown RBP12.81□□□□□ -0.36
CLTA-203ENST00000396603 RAB3CQ96E17 227 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 BCL7BQ9BQE9 202 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 CHMP1AQ9HD42 196 aaPredicted RBP12.81□□□□□ -0.36
CLTA-203ENST00000396603 GFOD1Q9NXC2 390 aa12.81□□□□□ -0.36
CLTA-203ENST00000396603 NCBP2LA6PVI3 153 aaKnown RBP12.8□□□□□ -0.36
CLTA-203ENST00000396603 MOSP00540 346 aa12.8□□□□□ -0.36
CLTA-203ENST00000396603 IGHV3-7P01780 117 aa12.8□□□□□ -0.36
CLTA-203ENST00000396603 OR5H8P0DN80 308 aa12.8□□□□□ -0.36
CLTA-203ENST00000396603 SLC2A2P11168 524 aaPredicted RBP12.8□□□□□ -0.36
CLTA-203ENST00000396603 LTC4SQ16873 150 aa12.8□□□□□ -0.36
CLTA-203ENST00000396603 C9orf66Q5T8R8 295 aa12.8□□□□□ -0.36
CLTA-203ENST00000396603 Q8N9W7 124 aa12.8□□□□□ -0.36
CLTA-203ENST00000396603 RTN4IP1Q8WWV3 396 aaPredicted RBP12.8□□□□□ -0.36
CLTA-203ENST00000396603 ARL11Q969Q4 196 aa12.8□□□□□ -0.36
CLTA-203ENST00000396603 RAX2Q96IS3 184 aa12.8□□□□□ -0.36
CLTA-203ENST00000396603 SULT4A1Q9BR01 284 aa12.8□□□□□ -0.36
CLTA-203ENST00000396603 FAAP24Q9BTP7 215 aa12.8□□□□□ -0.36
CLTA-203ENST00000396603 ATG5Q9H1Y0 275 aa12.8□□□□□ -0.36
CLTA-203ENST00000396603 A0A0A6YYD4 124 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 SDCBPO00560 298 aaPredicted RBP12.79□□□□□ -0.36
CLTA-203ENST00000396603 SOCS1O15524 211 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 IGHG4P01861 327 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 IGF1P05019 195 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 CLEC2LP0C7M8 214 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 SNRPBP14678 240 aaKnown RBP12.79□□□□□ -0.36
CLTA-203ENST00000396603 VBP1P61758 197 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 CFHR3Q02985 330 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 C18orf65Q6ZTR6 163 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 OR10R2Q8NGX6 335 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 LGALS14Q8TCE9 139 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 RAB2BQ8WUD1 216 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 CCDC107Q8WV48 283 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 SLC25A46Q96AG3 418 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 RASL11BQ9BPW5 248 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 C12orf4Q9NQ89 552 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 PLSCR3Q9NRY6 295 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 LINC00527Q9UJ94 153 aa12.79□□□□□ -0.36
CLTA-203ENST00000396603 A0A0A6YYH2 397 aa12.78□□□□□ -0.36
CLTA-203ENST00000396603 A0A0B4J203 849 aa12.78□□□□□ -0.36
CLTA-203ENST00000396603 A6NJ64 397 aa12.78□□□□□ -0.36
CLTA-203ENST00000396603 CD3GP09693 182 aa12.78□□□□□ -0.36
CLTA-203ENST00000396603 RPS19P39019 145 aaKnown RBP12.78□□□□□ -0.36
CLTA-203ENST00000396603 NCS1P62166 190 aa12.78□□□□□ -0.36
CLTA-203ENST00000396603 FHL3Q13643 280 aa12.78□□□□□ -0.36
CLTA-203ENST00000396603 SLC25A48Q6ZT89 311 aaKnown RBP12.78□□□□□ -0.36
CLTA-203ENST00000396603 FAM71E2Q8N5Q1 922 aa12.78□□□□□ -0.36
CLTA-203ENST00000396603 OR4K15Q8NH41 348 aa12.78□□□□□ -0.36
CLTA-203ENST00000396603 C4orf3Q8WVX3 66 aa12.78□□□□□ -0.36
CLTA-203ENST00000396603 ACOT12Q8WYK0 555 aa12.78□□□□□ -0.36
CLTA-203ENST00000396603 AP3S1Q92572 193 aa12.78□□□□□ -0.36
CLTA-203ENST00000396603 ARHGAP5-AS1Q96IT6 56 aa12.78□□□□□ -0.36
CLTA-203ENST00000396603 S1PR3Q99500 378 aa12.78□□□□□ -0.36
CLTA-203ENST00000396603 CMSS1Q9BQ75 279 aaKnown RBP12.78□□□□□ -0.36
CLTA-203ENST00000396603 PECRQ9BY49 303 aa12.78□□□□□ -0.36
CLTA-203ENST00000396603 MBNL3Q9NUK0 354 aaKnown RBP12.78□□□□□ -0.36
CLTA-203ENST00000396603 RHBDL2Q9NX52 303 aa12.78□□□□□ -0.36
CLTA-203ENST00000396603 SPATA2Q9UM82 520 aa12.78□□□□□ -0.36
CLTA-203ENST00000396603 LSM4Q9Y4Z0 139 aaKnown RBP12.78□□□□□ -0.36
CLTA-203ENST00000396603 TRBV6-6A0A0A6YYG2 114 aa12.77□□□□□ -0.37
CLTA-203ENST00000396603 FOXI3A8MTJ6 420 aaPredicted RBP12.77□□□□□ -0.37
CLTA-203ENST00000396603 NAPSAO96009 420 aa12.77□□□□□ -0.37
CLTA-203ENST00000396603 RPLP1P05386 114 aaKnown RBP12.77□□□□□ -0.37
CLTA-203ENST00000396603 HIST1H1DP16402 221 aaKnown RBP12.77□□□□□ -0.37
CLTA-203ENST00000396603 VDAC1P21796 283 aa12.77□□□□□ -0.37
CLTA-203ENST00000396603 SOX6P35712 828 aa12.77□□□□□ -0.37
CLTA-203ENST00000396603 RORCP51449 518 aa12.77□□□□□ -0.37
CLTA-203ENST00000396603 INSL3P51460 131 aa12.77□□□□□ -0.37
CLTA-203ENST00000396603 TMBIM6P55061 237 aa12.77□□□□□ -0.37
CLTA-203ENST00000396603 CTF1Q16619 201 aa12.77□□□□□ -0.37
CLTA-203ENST00000396603 CLVS1Q8IUQ0 354 aaPredicted RBP12.77□□□□□ -0.37
CLTA-203ENST00000396603 MRPL30Q8TCC3 161 aaKnown RBP12.77□□□□□ -0.37
CLTA-203ENST00000396603 DIABLOQ9NR28 239 aa12.77□□□□□ -0.37
CLTA-203ENST00000396603 A0A1W2PPE3 182 aa12.76□□□□□ -0.37
CLTA-203ENST00000396603 LINC01548A6NM66 108 aa12.76□□□□□ -0.37
CLTA-203ENST00000396603 C12orf77C9JDV5 145 aa12.76□□□□□ -0.37
CLTA-203ENST00000396603 RAB27BO00194 218 aa12.76□□□□□ -0.37
CLTA-203ENST00000396603 PSMB8P28062 276 aa12.76□□□□□ -0.37
CLTA-203ENST00000396603 TALDO1P37837 337 aa12.76□□□□□ -0.37
CLTA-203ENST00000396603 REG1BP48304 166 aa12.76□□□□□ -0.37
CLTA-203ENST00000396603 TMEM50BP56557 158 aa12.76□□□□□ -0.37
CLTA-203ENST00000396603 PITPNAQ00169 270 aa12.76□□□□□ -0.37
CLTA-203ENST00000396603 ZNF439Q8NDP4 499 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms