RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 RAB29O14966 203 aa13.46□□□□□ -0.25
EXOSC3-202ENST00000396521 JTBO76095 146 aa13.46□□□□□ -0.25
EXOSC3-202ENST00000396521 MAS1P04201 325 aa13.46□□□□□ -0.25
EXOSC3-202ENST00000396521 TFAP2AP05549 437 aa13.46□□□□□ -0.25
EXOSC3-202ENST00000396521 PPP1CCP36873 323 aaKnown RBP13.46□□□□□ -0.25
EXOSC3-202ENST00000396521 MED21Q13503 144 aa13.46□□□□□ -0.25
EXOSC3-202ENST00000396521 AWAT2Q6E213 333 aa13.46□□□□□ -0.25
EXOSC3-202ENST00000396521 ZNF562Q6V9R5 426 aa13.46□□□□□ -0.25
EXOSC3-202ENST00000396521 JAGN1Q8N5M9 183 aa13.46□□□□□ -0.25
EXOSC3-202ENST00000396521 OR52L2PQ8NGH6 319 aa13.46□□□□□ -0.25
EXOSC3-202ENST00000396521 GHSRQ92847 366 aa13.46□□□□□ -0.25
EXOSC3-202ENST00000396521 MUL1Q969V5 352 aa13.46□□□□□ -0.25
EXOSC3-202ENST00000396521 RHOVQ96L33 236 aa13.46□□□□□ -0.25
EXOSC3-202ENST00000396521 SELENOIQ9C0D9 397 aa13.46□□□□□ -0.25
EXOSC3-202ENST00000396521 SAA2-SAA4A0A096LPE2 208 aa13.45□□□□□ -0.26
EXOSC3-202ENST00000396521 LOC100130705A0A1B0GUX0 176 aa13.45□□□□□ -0.26
EXOSC3-202ENST00000396521 PDCD6O75340 191 aa13.45□□□□□ -0.26
EXOSC3-202ENST00000396521 GSTP1P09211 210 aaKnown RBP13.45□□□□□ -0.26
EXOSC3-202ENST00000396521 SAA2P0DJI9 122 aaPredicted RBP13.45□□□□□ -0.26
EXOSC3-202ENST00000396521 MGMTP16455 207 aa13.45□□□□□ -0.26
EXOSC3-202ENST00000396521 MYL12AP19105 171 aa13.45□□□□□ -0.26
EXOSC3-202ENST00000396521 XAF1Q6GPH4 301 aa13.45□□□□□ -0.26
EXOSC3-202ENST00000396521 PPP1R27Q86WC6 154 aa13.45□□□□□ -0.26
EXOSC3-202ENST00000396521 ABHD5Q8WTS1 349 aa13.45□□□□□ -0.26
EXOSC3-202ENST00000396521 THRSPQ92748 146 aa13.45□□□□□ -0.26
EXOSC3-202ENST00000396521 Q96M66 194 aa13.45□□□□□ -0.26
EXOSC3-202ENST00000396521 CNOT2Q9NZN8 540 aaKnown RBP13.45□□□□□ -0.26
EXOSC3-202ENST00000396521 A0A0G2JLM5 398 aa13.44□□□□□ -0.26
EXOSC3-202ENST00000396521 H3BUA1 57 aa13.44□□□□□ -0.26
EXOSC3-202ENST00000396521 CRTAPO75718 401 aaPredicted RBP13.44□□□□□ -0.26
EXOSC3-202ENST00000396521 OR3A3P47888 321 aa13.44□□□□□ -0.26
EXOSC3-202ENST00000396521 TPPP2P59282 170 aa13.44□□□□□ -0.26
EXOSC3-202ENST00000396521 NDPQ00604 133 aa13.44□□□□□ -0.26
EXOSC3-202ENST00000396521 GNMTQ14749 295 aa13.44□□□□□ -0.26
EXOSC3-202ENST00000396521 TTC23Q5W5X9 447 aa13.44□□□□□ -0.26
EXOSC3-202ENST00000396521 DMKNQ6E0U4 476 aaPredicted RBP13.44□□□□□ -0.26
EXOSC3-202ENST00000396521 UNQ5815/PRO19632Q6UWF5 114 aa13.44□□□□□ -0.26
EXOSC3-202ENST00000396521 DHRSXQ8N5I4 330 aa13.44□□□□□ -0.26
EXOSC3-202ENST00000396521 NKAIN3Q8N8D7 197 aa13.44□□□□□ -0.26
EXOSC3-202ENST00000396521 MRPL30Q8TCC3 161 aaKnown RBP13.44□□□□□ -0.26
EXOSC3-202ENST00000396521 UQCC2Q9BRT2 126 aa13.44□□□□□ -0.26
EXOSC3-202ENST00000396521 FBXL15Q9H469 300 aa13.44□□□□□ -0.26
EXOSC3-202ENST00000396521 FBXO7Q9Y3I1 522 aa13.44□□□□□ -0.26
EXOSC3-202ENST00000396521 DNAH1Q9P2D7 4330 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 UBE2QL1A1L167 161 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 ITGB1BP1O14713 200 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 SLC22A1O15245 554 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 EGR2P11161 476 aaPredicted RBP13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 CAPGP40121 348 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 ETV1P50549 477 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 FAM131AQ6UXB0 335 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 SETD9Q8NE22 299 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 NRG4Q8WWG1 115 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 RBMXL1Q96E39 390 aaKnown RBP13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 NEDD4LQ96PU5 975 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 OR14A2Q96R54 314 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 LYSTQ99698 3801 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 IFI27L2Q9H2X8 130 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 BANF2Q9H503 90 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 GAR1Q9NY12 217 aaKnown RBP13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 SLC23A1Q9UHI7 598 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 EXOSC1Q9Y3B2 195 aaKnown RBP13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 WASHC3Q9Y3C0 194 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 A3GALT2U3KPV4 340 aa13.43□□□□□ -0.26
EXOSC3-202ENST00000396521 CSMD3Q7Z407 3707 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 TRAV8-7A0A075B6U6 113 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 TRBV5-7A0A0A0MS05 114 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 SPDEFO95238 335 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 IGHV3-11P01762 117 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 UBBP0CG47 229 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 ARSBP15848 533 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 AQP4P55087 323 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 TATDN3Q17R31 274 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 OR2G6Q5TZ20 316 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 SIGIRRQ6IA17 410 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 GTSCR1Q86UQ5 136 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 OR5AN1Q8NGI8 311 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 ORAI1Q96D31 301 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 TMEM68Q96MH6 324 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 TSNAXQ99598 290 aaKnown RBP13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 RSRP1Q9BUV0 290 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 DIMT1Q9UNQ2 313 aaKnown RBP13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 BIRC6Q9NR09 4857 aa13.42□□□□□ -0.26
EXOSC3-202ENST00000396521 C13orf42A0A1B0GVH6 325 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 H7C2Y5 167 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 TRGV3P03979 118 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 CT45A6P0DMU7 189 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 CT45A5P0DMU8 189 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 CT45A7P0DMV0 189 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 TAS2R43P59537 309 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 RPS11P62280 158 aaKnown RBP eCLIP13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 HMGN3Q15651 99 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 HAGHQ16775 308 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 C6orf141Q5SZD1 244 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 IZUMO2Q6UXV1 221 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 LFNGQ8NES3 379 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 APH1BQ8WW43 257 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 EDARADDQ8WWZ3 215 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 MS4A10Q96PG2 267 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 RIMS4Q9H426 269 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms