RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 WDR31Q8NA23 367 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 FAM216AQ8WUB2 273 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 CT55Q8WUE5 264 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 NINJ1Q92982 152 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 HLA-CQ95604 372 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 HS3ST6Q96QI5 342 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 TAAR6Q96RI8 345 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 TXNDC17Q9BRA2 123 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 TMEM30CPA0ZSE6 113 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 PHOX2AO14813 284 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 GDF9O60383 454 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 WDR1O75083 606 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 PGA5P0DJD9 388 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 CCL2P13500 99 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 CD99P14209 185 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 CCKARP32238 428 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 CEACAM6P40199 344 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 RPP30P78346 268 aaKnown RBP8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 LCN2P80188 198 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 ZNF146Q15072 292 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 ZNF585BQ52M93 769 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 OR10G9Q8NGN4 311 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 OR10G7Q8NGN6 311 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 OR4X1Q8NH49 305 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 GALMQ96C23 342 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 NEIL1Q96FI4 390 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 THOC3Q96J01 351 aaKnown RBP8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 SNX22Q96L94 193 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 SSX3Q99909 188 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 VSIRQ9H7M9 311 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 CHODLQ9H9P2 273 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 WASF3Q9UPY6 502 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 GAB2Q9UQC2 676 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 NCKAP5O14513 1909 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 PI4KAP42356 2102 aa8.5□□□□□ -1.05
UBE2D3-208ENST00000394803 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 RAB29O14966 203 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 PDE6DO43924 150 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 NXPH2O95156 264 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 OR2H2O95918 312 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 NGFP01138 241 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 IGLV2-14P01704 120 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 CA6P23280 308 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 RAB4BP61018 213 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 PLGLB1Q02325 96 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 ARL16Q0P5N6 197 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 GAMTQ14353 236 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 PDZD11Q5EBL8 140 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 HAPLN4Q86UW8 402 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 OR51G1Q8NGK1 321 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 OR1K1Q8NGR3 316 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 TMEM170AQ8WVE7 144 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 TMEM18Q96B42 140 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 IMMP2LQ96T52 175 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 DDA1Q9BW61 102 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 A0A087X0M5 115 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 A0A1B0GX30 115 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 PINLYPA6NC86 204 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 OOEPA6NGQ2 149 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 SIRPB1O00241 398 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 TYMSP04818 313 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 IL2RGP31785 369 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 IDH3GP51553 393 aaPredicted RBP8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 ERVK11-1P61568 191 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 RPL23P62829 140 aaKnown RBP8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 TMEM249Q2WGJ8 235 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 OR8G2PQ6IF36 304 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 TRAT1Q6PIZ9 186 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 RPP25LQ8N5L8 163 aaKnown RBP8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 OR2T10Q8NGZ9 312 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 RAB24Q969Q5 203 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 ZNF488Q96MN9 340 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 PARLQ9H300 379 aa8.49□□□□□ -1.05
UBE2D3-208ENST00000394803 DNAH14Q0VDD8 3507 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 KMT2EQ8IZD2 1858 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 RTTNQ86VV8 2226 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 USP34Q70CQ2 3546 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 XKRY2A2RUG3 117 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 LRRC30A6NM36 301 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 ZNF891A8MT65 544 aaPredicted RBP8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 F6UZH7 168 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 GGCTO75223 188 aaKnown RBP8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 MPDU1O75352 247 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 CLDN14O95500 239 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 RD3LP0DJH9 198 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 PDLIM4P50479 330 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 C4orf17Q53FE4 359 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 GFI1BQ5VTD9 330 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 SLC35E4Q6ICL7 350 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 SLC23A3Q6PIS1 610 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 ZNF66Q6ZN08 573 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 C5orf24Q7Z6I8 188 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 PRR18Q8N4B5 295 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 C17orf78Q8N4C9 275 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 OR4F5Q8NH21 305 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 RPUSD4Q96CM3 377 aaKnown RBP8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 C14orf144Q96I85 54 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 OR4F4Q96R69 305 aa8.48□□□□□ -1.05
UBE2D3-208ENST00000394803 FSCN3Q9NQT6 498 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms