RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 JAGN1Q8N5M9 183 aa11.75□□□□□ -0.53
CHMP3-202ENST00000393773 OR2AK2Q8NG84 335 aa11.75□□□□□ -0.53
CHMP3-202ENST00000393773 KCNIP1Q9NZI2 227 aa11.75□□□□□ -0.53
CHMP3-202ENST00000393773 TRBV5-7A0A0A0MS05 114 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 OR5H14A6NHG9 310 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 ARPC1BO15143 372 aaKnown RBP11.74□□□□□ -0.53
CHMP3-202ENST00000393773 ST8SIA5O15466 376 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 PDCD6O75340 191 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 RGS11O94810 467 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 CT45A6P0DMU7 189 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 CT45A5P0DMU8 189 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 CT45A7P0DMV0 189 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 ARSBP15848 533 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 SMN1Q16637 294 aaKnown RBP11.74□□□□□ -0.53
CHMP3-202ENST00000393773 Q499Y3 187 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 AKIRIN2Q53H80 203 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 RPL39P5Q59GN2 51 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 DMKNQ6E0U4 476 aaPredicted RBP11.74□□□□□ -0.53
CHMP3-202ENST00000393773 UNQ5815/PRO19632Q6UWF5 114 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 PPP1R27Q86WC6 154 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 ANKRD13BQ86YJ7 626 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 ABHD5Q8WTS1 349 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 PGLYRP3Q96LB9 341 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 MS4A10Q96PG2 267 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 OR14A2Q96R54 314 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 ELOVL1Q9BW60 279 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 SLA2Q9H6Q3 261 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 CNOT2Q9NZN8 540 aaKnown RBP11.74□□□□□ -0.53
CHMP3-202ENST00000393773 CKLFQ9UBR5 152 aa11.74□□□□□ -0.53
CHMP3-202ENST00000393773 H0YJW9 148 aa11.73□□□□□ -0.53
CHMP3-202ENST00000393773 WBP4O75554 376 aaKnown RBP11.73□□□□□ -0.53
CHMP3-202ENST00000393773 CRTAPO75718 401 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-202ENST00000393773 JTBO76095 146 aa11.73□□□□□ -0.53
CHMP3-202ENST00000393773 TMEM267Q0VDI3 215 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-202ENST00000393773 PLGLAQ15195 96 aa11.73□□□□□ -0.53
CHMP3-202ENST00000393773 YIF1BQ5BJH7 314 aa11.73□□□□□ -0.53
CHMP3-202ENST00000393773 GLDNQ6ZMI3 551 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-202ENST00000393773 IL34Q6ZMJ4 242 aa11.73□□□□□ -0.53
CHMP3-202ENST00000393773 LFNGQ8NES3 379 aa11.73□□□□□ -0.53
CHMP3-202ENST00000393773 GHSRQ92847 366 aa11.73□□□□□ -0.53
CHMP3-202ENST00000393773 GALMQ96C23 342 aa11.73□□□□□ -0.53
CHMP3-202ENST00000393773 PARP12Q9H0J9 701 aaKnown RBP11.73□□□□□ -0.53
CHMP3-202ENST00000393773 RNF150Q9ULK6 438 aa11.73□□□□□ -0.53
CHMP3-202ENST00000393773 CIB2O75838 187 aa11.72□□□□□ -0.53
CHMP3-202ENST00000393773 CA2P00918 260 aa11.72□□□□□ -0.53
CHMP3-202ENST00000393773 TRGV3P03979 118 aa11.72□□□□□ -0.53
CHMP3-202ENST00000393773 TFAP2AP05549 437 aa11.72□□□□□ -0.53
CHMP3-202ENST00000393773 RASSF2P50749 326 aa11.72□□□□□ -0.53
CHMP3-202ENST00000393773 TMPRSS11AQ6ZMR5 421 aa11.72□□□□□ -0.53
CHMP3-202ENST00000393773 ZNF485Q8NCK3 441 aa11.72□□□□□ -0.53
CHMP3-202ENST00000393773 FAM46BQ96A09 425 aa11.72□□□□□ -0.53
CHMP3-202ENST00000393773 SULT4A1Q9BR01 284 aa11.72□□□□□ -0.53
CHMP3-202ENST00000393773 RETNQ9HD89 108 aa11.72□□□□□ -0.53
CHMP3-202ENST00000393773 BABAM2Q9NXR7 383 aa11.72□□□□□ -0.53
CHMP3-202ENST00000393773 PIPOXQ9P0Z9 390 aa11.72□□□□□ -0.53
CHMP3-202ENST00000393773 SLC23A1Q9UHI7 598 aa11.72□□□□□ -0.53
CHMP3-202ENST00000393773 LOC100130705A0A1B0GUX0 176 aa11.71□□□□□ -0.53
CHMP3-202ENST00000393773 RAB29O14966 203 aa11.71□□□□□ -0.53
CHMP3-202ENST00000393773 RBBP9O75884 186 aa11.71□□□□□ -0.53
CHMP3-202ENST00000393773 BAG2O95816 211 aa11.71□□□□□ -0.53
CHMP3-202ENST00000393773 ZP3P21754 424 aa11.71□□□□□ -0.53
CHMP3-202ENST00000393773 DCKP27707 260 aa11.71□□□□□ -0.53
CHMP3-202ENST00000393773 SSBP2P81877 361 aaPredicted RBP11.71□□□□□ -0.53
CHMP3-202ENST00000393773 ZNF562Q6V9R5 426 aa11.71□□□□□ -0.53
CHMP3-202ENST00000393773 CDH26Q8IXH8 852 aa11.71□□□□□ -0.53
CHMP3-202ENST00000393773 SVOPQ8N4V2 548 aa11.71□□□□□ -0.53
CHMP3-202ENST00000393773 ZFP41Q8N8Y5 198 aa11.71□□□□□ -0.53
CHMP3-202ENST00000393773 OR5AN1Q8NGI8 311 aa11.71□□□□□ -0.53
CHMP3-202ENST00000393773 OR9G4Q8NGQ1 327 aa11.71□□□□□ -0.53
CHMP3-202ENST00000393773 CLCC1Q96S66 551 aa11.71□□□□□ -0.53
CHMP3-202ENST00000393773 DIMT1Q9UNQ2 313 aaKnown RBP11.71□□□□□ -0.53
CHMP3-202ENST00000393773 WASHC3Q9Y3C0 194 aa11.71□□□□□ -0.53
CHMP3-202ENST00000393773 HERC2O95714 4834 aa11.71□□□□□ -0.54
CHMP3-202ENST00000393773 A0A1W2PPK0 400 aa11.7□□□□□ -0.54
CHMP3-202ENST00000393773 IFNA6P05013 189 aa11.7□□□□□ -0.54
CHMP3-202ENST00000393773 KLF5Q13887 457 aaPredicted RBP11.7□□□□□ -0.54
CHMP3-202ENST00000393773 PSG5Q15238 335 aa11.7□□□□□ -0.54
CHMP3-202ENST00000393773 POC5Q8NA72 575 aa11.7□□□□□ -0.54
CHMP3-202ENST00000393773 IL1F10Q8WWZ1 152 aa11.7□□□□□ -0.54
CHMP3-202ENST00000393773 ABHD14BQ96IU4 210 aa11.7□□□□□ -0.54
CHMP3-202ENST00000393773 DERL3Q96Q80 235 aa11.7□□□□□ -0.54
CHMP3-202ENST00000393773 SLC29A1Q99808 456 aa11.7□□□□□ -0.54
CHMP3-202ENST00000393773 AGMATQ9BSE5 352 aa11.7□□□□□ -0.54
CHMP3-202ENST00000393773 RANGRFQ9HD47 186 aaPredicted RBP11.7□□□□□ -0.54
CHMP3-202ENST00000393773 METTL1Q9UBP6 276 aaKnown RBP11.7□□□□□ -0.54
CHMP3-202ENST00000393773 STEAP1Q9UHE8 339 aa11.7□□□□□ -0.54
CHMP3-202ENST00000393773 CLEC2DQ9UHP7 191 aa11.7□□□□□ -0.54
CHMP3-202ENST00000393773 ADAM30Q9UKF2 790 aa11.7□□□□□ -0.54
CHMP3-202ENST00000393773 H3BUA1 57 aa11.69□□□□□ -0.54
CHMP3-202ENST00000393773 H7C2Y5 167 aa11.69□□□□□ -0.54
CHMP3-202ENST00000393773 SPDEFO95238 335 aa11.69□□□□□ -0.54
CHMP3-202ENST00000393773 NAPSAO96009 420 aa11.69□□□□□ -0.54
CHMP3-202ENST00000393773 GSTP1P09211 210 aaKnown RBP11.69□□□□□ -0.54
CHMP3-202ENST00000393773 MC5RP33032 325 aa11.69□□□□□ -0.54
CHMP3-202ENST00000393773 CAPGP40121 348 aa11.69□□□□□ -0.54
CHMP3-202ENST00000393773 DEFA5Q01523 94 aa11.69□□□□□ -0.54
CHMP3-202ENST00000393773 ZNF880Q6PDB4 577 aa11.69□□□□□ -0.54
CHMP3-202ENST00000393773 NKAIN3Q8N8D7 197 aa11.69□□□□□ -0.54
CHMP3-202ENST00000393773 GRPEL2Q8TAA5 225 aa11.69□□□□□ -0.54
CHMP3-202ENST00000393773 RNF5Q99942 180 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms