RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 OR2A1Q8NGT9 310 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 MCFD2Q8NI22 146 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 ZFAND1Q8TCF1 268 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 GNPDA2Q8TDQ7 276 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 SLC37A2Q8TED4 501 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 ACOT12Q8WYK0 555 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 APOBEC3DQ96AK3 386 aaPredicted RBP1.3□□□□□ -2.2
TRAV40-201ENST00000390467 SMARCD1Q96GM5 515 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 DIRAS2Q96HU8 199 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 PGLYRP3Q96LB9 341 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 DNAJC30Q96LL9 226 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 FAM19A4Q96LR4 140 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 SERPINI1Q99574 410 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 KCTD14Q9BQ13 255 aaPredicted RBP1.3□□□□□ -2.2
TRAV40-201ENST00000390467 CMSS1Q9BQ75 279 aaKnown RBP1.3□□□□□ -2.2
TRAV40-201ENST00000390467 MARVELD1Q9BSK0 173 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 MND1Q9BWT6 205 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 MAP1LC3BQ9GZQ8 125 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 COA1Q9GZY4 146 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 FBXL15Q9H469 300 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 HMG20AQ9NP66 347 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 ENY2Q9NPA8 101 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 EXOSC4Q9NPD3 245 aaKnown RBP1.3□□□□□ -2.2
TRAV40-201ENST00000390467 KCNJ16Q9NPI9 418 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 COMMD9Q9P000 198 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 MMP17Q9ULZ9 603 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF257Q9Y2Q1 563 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 POLR1DQ9Y2S0 133 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.3□□□□□ -2.2
TRAV40-201ENST00000390467 TMEM14AQ9Y6G1 99 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 NCOA1Q15788 1441 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 ARAP1Q96P48 1450 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 BICRAQ9NZM4 1560 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF407Q9C0G0 2248 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 DENND4AQ7Z401 1863 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 SCN1AP35498 2009 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 A0A096LPI6 279 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 IGHV5-10-1A0A0J9YXX1 117 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 TMEM223A0PJW6 202 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 FAM92AA1XBS5 289 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 CCDC160A6NGH7 325 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 ARL5CA6NH57 179 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 OR5H14A6NHG9 310 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 OR5H1A6NKK0 313 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 F6UB75 175 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 G3V2T6 193 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 TRAPPC2LH3BP13 241 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 FAAHO00519 579 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 XKRYO14609 159 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 DEGS1O15121 323 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 TPST1O60507 370 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 RDH16O75452 317 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 TNFSF15O95150 251 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 C1QBP02746 253 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 TTRP02766 147 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 REG1AP05451 166 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 OR5G3P0C626 314 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 MPC1LP0DKB6 136 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF708P17019 499 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 SPI1P17947 270 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 NELFEP18615 380 aaKnown RBP1.29□□□□□ -2.2
TRAV40-201ENST00000390467 PAX6P26367 422 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 PFN2P35080 140 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 PHBP35232 272 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 GLRXP35754 106 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 RPL35P42766 123 aaKnown RBP1.29□□□□□ -2.2
TRAV40-201ENST00000390467 PPICP45877 212 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 C1QTNF8P60827 252 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 RRAS2P62070 204 aaPredicted RBP1.29□□□□□ -2.2
TRAV40-201ENST00000390467 RPS28P62857 69 aaKnown RBP1.29□□□□□ -2.2
TRAV40-201ENST00000390467 SLC35A1P78382 337 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF92Q03936 586 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 LOXL1Q08397 574 aaPredicted RBP1.29□□□□□ -2.2
TRAV40-201ENST00000390467 SMAGPQ0VAQ4 97 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 ECH1Q13011 328 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 PMVKQ15126 192 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 KCNJ8Q15842 424 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 TAF9Q16594 264 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 CEACAM16Q2WEN9 425 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 LAMTOR1Q6IAA8 161 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 OR2T5Q6IEZ7 315 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 TBPL2Q6SJ96 375 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 FAM183BPQ6ZVS7 135 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 UMODL1-AS1Q8N2C9 162 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 MUC15Q8N387 334 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 COX18Q8N8Q8 333 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF439Q8NDP4 499 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 OR4D11Q8NGI4 311 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 OR13C4Q8NGS5 318 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 OR2K2Q8NGT1 345 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 OR10R2Q8NGX6 335 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 OR2T29Q8NH02 315 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 OR51E1Q8TCB6 317 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 NT5CQ8TCD5 201 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 TMEM54Q969K7 222 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 GALMQ96C23 342 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 CAPZA3Q96KX2 299 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 PPP3R2Q96LZ3 170 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 BIRC8Q96P09 236 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF382Q96SR6 550 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms