RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 BCL2L11O43521 198 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 ZNF354AO60765 605 aaPredicted RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 NDUFS7O75251 213 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 CLN5O75503 358 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 SMIM10L1P0DMW3 83 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 DVL1P1P54792 670 aaPredicted RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 RPL19P84098 196 aaKnown RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 SLC25A53Q5H9E4 307 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 DBX2Q6ZNG2 339 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 LURAP1LQ8IV03 231 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 MITD1Q8WV92 249 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 SMIM10Q96HG1 83 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 LINC00527Q9UJ94 153 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 ZNF705FA8MVS1 300 aaPredicted RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 TGFBR3LH3BV60 316 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 XRCC3O43542 346 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 GSTZ1O43708 216 aaPredicted RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 CTAG2O75638 210 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 OR2C1O95371 312 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 TRGV3P03979 118 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 ZNF705DP0CH99 300 aaPredicted RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 ZNF705BP0CI00 300 aaPredicted RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 GZMHP20718 246 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 S100A4P26447 101 aaKnown RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 CEACAM6P40199 344 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 ZNF133P52736 654 aaPredicted RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 ZNF705AQ6ZN79 300 aaPredicted RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 OR4B1Q8NGF8 309 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 OR52M1Q8NGK5 317 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 R4GMQ9 66 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 PLXNA2O75051 1894 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 IGHV3-35A0A0C4DH35 117 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 UMAD1C9J7I0 102 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 GATCO43716 136 aaKnown RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 IGKV3-11P04433 115 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 MMP7P09237 267 aaPredicted RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 LMO1P25800 156 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 RAG2P55895 527 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 LSM6P62312 80 aaKnown RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 EIF5AP63241 154 aaKnown RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 COL10A1Q03692 680 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 SLC17A1Q14916 467 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 AWAT1Q58HT5 328 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 SPOCK3Q9BQ16 436 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 WDR13Q9H1Z4 485 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 OR4C45A6NMZ5 311 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 K7EPK0 472 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 DVL1O14640 695 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 LILRA1O75019 489 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 DHRS3O75911 302 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 CELA3BP08861 270 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 MUC1P15941 1255 aaPredicted RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 ZBTB25P24278 435 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 GABRA6Q16445 453 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 C11orf87Q6NUJ2 197 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 ATG4DQ86TL0 474 aaPredicted RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 FAM71E2Q8N5Q1 922 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 ASB10Q8WXI3 467 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 HARBI1Q96MB7 349 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 BBC3Q96PG8 261 aaPredicted RBP5.58□□□□□ -1.52
NEDD9-202ENST00000379446 TMPRSS5Q9H3S3 457 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 MTFP1Q9UDX5 166 aa5.58□□□□□ -1.52
NEDD9-202ENST00000379446 C5orf42Q9H799 3197 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 MBD3L4A6NDZ8 208 aaPredicted RBP5.57□□□□□ -1.52
NEDD9-202ENST00000379446 MBD3L3A6NE82 208 aaPredicted RBP5.57□□□□□ -1.52
NEDD9-202ENST00000379446 MBD3L5A6NJ08 208 aaPredicted RBP5.57□□□□□ -1.52
NEDD9-202ENST00000379446 SNRPGP15A8MWD9 76 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 AP4M1O00189 453 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 CTXN2P0C2S0 81 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 GAAP10253 952 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 ZNF25P17030 456 aaPredicted RBP5.57□□□□□ -1.52
NEDD9-202ENST00000379446 ALOX5APP20292 161 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 OPRK1P41145 380 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 SURF2Q15527 256 aaPredicted RBP5.57□□□□□ -1.52
NEDD9-202ENST00000379446 ANKRD55Q3KP44 614 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 ZNF260Q3ZCT1 412 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 MBD3L2Q8NHZ7 208 aaPredicted RBP5.57□□□□□ -1.52
NEDD9-202ENST00000379446 FAM213BQ8TBF2 198 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 SPSB1Q96BD6 273 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 FLYWCH2Q96CP2 140 aaKnown RBP5.57□□□□□ -1.52
NEDD9-202ENST00000379446 GGACTQ9BVM4 153 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 DPM3Q9P2X0 92 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 C7orf77A4D0Y5 90 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 DPRXA6NFQ7 191 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 SS18L1O75177 396 aaPredicted RBP5.57□□□□□ -1.52
NEDD9-202ENST00000379446 OR2F2O95006 317 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 CD24P25063 80 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 UBE2KP61086 200 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 RPL23AP62750 156 aaKnown RBP5.57□□□□□ -1.52
NEDD9-202ENST00000379446 DHRS2Q13268 280 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 OR2F1Q13607 317 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 PMS2P11Q13670 270 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 HIST2H3PS2Q5TEC6 136 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 LPCAT3Q6P1A2 487 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 IGF2-ASQ6U949 168 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 IL34Q6ZMJ4 242 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 SMIM15Q7Z3B0 74 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 TMEM219Q86XT9 240 aa5.57□□□□□ -1.52
NEDD9-202ENST00000379446 KLHL30-AS1Q8NEE0 82 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms