RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 TNFRSF14Q92956 283 aa11.14□□□□□ -0.63
PRPF18-202ENST00000378572 NECAP2Q9NVZ3 263 aa11.14□□□□□ -0.63
PRPF18-202ENST00000378572 KIF25Q9UIL4 384 aa11.14□□□□□ -0.63
PRPF18-202ENST00000378572 TRAPPC2LQ9UL33 140 aa11.14□□□□□ -0.63
PRPF18-202ENST00000378572 KIAA2026Q5HYC2 2103 aa11.14□□□□□ -0.63
PRPF18-202ENST00000378572 FABP7O15540 132 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 PMP2P02689 132 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 IFNA6P05013 189 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 PAX6P26367 422 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 LGALS4P56470 323 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 HERPUD1Q15011 391 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 RBMS2Q15434 407 aaKnown RBP11.13□□□□□ -0.63
PRPF18-202ENST00000378572 HMGN3Q15651 99 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 PLET1Q6UQ28 207 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 TMEM17Q86X19 198 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 OR51S1Q8NGJ8 323 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 OR4A4PQ8NGN8 299 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 OR2T6Q8NHC8 308 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 C17orf50Q8WW18 174 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 CABLES2Q9BTV7 478 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 RAB18Q9NP72 206 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 C19orf12Q9NSK7 152 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 NUBP2Q9Y5Y2 271 aa11.13□□□□□ -0.63
PRPF18-202ENST00000378572 MEIKINA0A087WXM9 373 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 ODAMA1E959 279 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 TCRBP04435 133 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 GSTT2P0CG29 244 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 VSIG10L2P0DP72 767 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 SPNP16150 400 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 RCC1P18754 421 aaPredicted RBP11.12□□□□□ -0.63
PRPF18-202ENST00000378572 GLIPR1P48060 266 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 CCR6P51684 374 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 RPL31P62899 125 aaKnown RBP11.12□□□□□ -0.63
PRPF18-202ENST00000378572 HIST2H2BDQ6DRA6 164 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 KLHDC1Q8N7A1 406 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 CREB3L1Q96BA8 519 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 SLC25A21Q9BQT8 299 aaPredicted RBP11.12□□□□□ -0.63
PRPF18-202ENST00000378572 MARVELD1Q9BSK0 173 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 EHFQ9NZC4 300 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 OR6C3Q9NZP0 311 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 hCG_1809904A0A1W2PP81 198 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 A0A1W2PPE2 198 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 A0A1W2PR64 198 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 A0A1W2PRV1 198 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 NPIPB11E5RHQ5 1161 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 NDUFB6O95139 128 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 LHFPL1Q86WI0 220 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 CCDC107Q8WV48 283 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 HEXA-AS1Q9H8Q6 139 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 KCNIP1Q9NZI2 227 aa11.12□□□□□ -0.63
PRPF18-202ENST00000378572 SCTP09683 121 aa11.11□□□□□ -0.63
PRPF18-202ENST00000378572 OR5H8P0DN80 308 aa11.11□□□□□ -0.63
PRPF18-202ENST00000378572 GZMHP20718 246 aa11.11□□□□□ -0.63
PRPF18-202ENST00000378572 GLP1RP43220 463 aa11.11□□□□□ -0.63
PRPF18-202ENST00000378572 TSPAN5P62079 268 aa11.11□□□□□ -0.63
PRPF18-202ENST00000378572 MEF2CQ06413 473 aaPredicted RBP11.11□□□□□ -0.63
PRPF18-202ENST00000378572 EDDM3AQ14507 147 aa11.11□□□□□ -0.63
PRPF18-202ENST00000378572 ARSJQ5FYB0 599 aaPredicted RBP11.11□□□□□ -0.63
PRPF18-202ENST00000378572 ZNF660Q6AZW8 331 aaPredicted RBP11.11□□□□□ -0.63
PRPF18-202ENST00000378572 DHRS11Q6UWP2 260 aa11.11□□□□□ -0.63
PRPF18-202ENST00000378572 IDO2Q6ZQW0 420 aa11.11□□□□□ -0.63
PRPF18-202ENST00000378572 OR13C8Q8NGS7 320 aa11.11□□□□□ -0.63
PRPF18-202ENST00000378572 TERB2Q8NHR7 220 aa11.11□□□□□ -0.63
PRPF18-202ENST00000378572 CORO2AQ92828 525 aa11.11□□□□□ -0.63
PRPF18-202ENST00000378572 NPFFR1Q9GZQ6 430 aa11.11□□□□□ -0.63
PRPF18-202ENST00000378572 TAF9BQ9HBM6 251 aa11.11□□□□□ -0.63
PRPF18-202ENST00000378572 RAB9BQ9NP90 201 aa11.11□□□□□ -0.63
PRPF18-202ENST00000378572 ING3Q9NXR8 418 aa11.11□□□□□ -0.63
PRPF18-202ENST00000378572 TRBV6-7A0A0A0MS04 114 aa11.1□□□□□ -0.63
PRPF18-202ENST00000378572 SDCBPO00560 298 aaPredicted RBP11.1□□□□□ -0.63
PRPF18-202ENST00000378572 ECI1P42126 302 aa11.1□□□□□ -0.63
PRPF18-202ENST00000378572 EDDM3BP56851 147 aa11.1□□□□□ -0.63
PRPF18-202ENST00000378572 HCP5Q6MZN7 132 aa11.1□□□□□ -0.63
PRPF18-202ENST00000378572 C11orf88Q6PI97 169 aa11.1□□□□□ -0.63
PRPF18-202ENST00000378572 TPRX1Q8N7U7 411 aa11.1□□□□□ -0.63
PRPF18-202ENST00000378572 ZNF565Q8N9K5 539 aa11.1□□□□□ -0.63
PRPF18-202ENST00000378572 OR13A1Q8NGR1 328 aa11.1□□□□□ -0.63
PRPF18-202ENST00000378572 OR6F1Q8NGZ6 308 aa11.1□□□□□ -0.63
PRPF18-202ENST00000378572 GIMAP1Q8WWP7 306 aa11.1□□□□□ -0.63
PRPF18-202ENST00000378572 MMP28Q9H239 520 aa11.1□□□□□ -0.63
PRPF18-202ENST00000378572 PRKDCP78527 4128 aaKnown RBP11.1□□□□□ -0.63
PRPF18-202ENST00000378572 IGKV1-6A0A0C4DH72 117 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 hADV38S2A0JD32 116 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 C12orf77C9JDV5 145 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 G3V4G9 280 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 PEX14O75381 377 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 CGB3P0DN86 165 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 CGB7P0DN87 165 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 CCL3L1P16619 93 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 MECP2P51608 486 aaKnown RBP11.09□□□□□ -0.63
PRPF18-202ENST00000378572 ERVFRD-1P60508 538 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 SCGB2B2Q4G0G5 96 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 IGSF11Q5DX21 431 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 LYG1Q8N1E2 194 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 MRGPRDQ8TDS7 321 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 GINS4Q9BRT9 223 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 TOLLIPQ9H0E2 274 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 C20orf85Q9H1P6 137 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 NUDT15Q9NV35 164 aa11.09□□□□□ -0.63
PRPF18-202ENST00000378572 LINC00312Q9Y6C7 94 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms