RNA–Protein interactions for RNA: ENST00000377294.2

ZKSCAN4-201, Transcript of zinc finger with KRAB and SCAN domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN4, Length 2,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4-201ENST00000377294 ZNF665Q9H7R5 613 aa12.18□□□□□ -0.46
ZKSCAN4-201ENST00000377294 MMP24Q9Y5R2 645 aa12.18□□□□□ -0.46
ZKSCAN4-201ENST00000377294 HMGB3O15347 200 aaKnown RBP12.17□□□□□ -0.46
ZKSCAN4-201ENST00000377294 S1PR2O95136 353 aa12.17□□□□□ -0.46
ZKSCAN4-201ENST00000377294 MMP9P14780 707 aa12.17□□□□□ -0.46
ZKSCAN4-201ENST00000377294 BRWD1-AS2P59051 145 aa12.17□□□□□ -0.46
ZKSCAN4-201ENST00000377294 GUSBP1Q15486 140 aa12.17□□□□□ -0.46
ZKSCAN4-201ENST00000377294 MSMPQ1L6U9 139 aa12.17□□□□□ -0.46
ZKSCAN4-201ENST00000377294 DEFB109BQ30KR1 87 aa12.17□□□□□ -0.46
ZKSCAN4-201ENST00000377294 MOB1BQ7L9L4 216 aa12.17□□□□□ -0.46
ZKSCAN4-201ENST00000377294 Q8IYB0 196 aa12.17□□□□□ -0.46
ZKSCAN4-201ENST00000377294 ZNF525Q8N782 197 aa12.17□□□□□ -0.46
ZKSCAN4-201ENST00000377294 LFNGQ8NES3 379 aa12.17□□□□□ -0.46
ZKSCAN4-201ENST00000377294 GNPNAT1Q96EK6 184 aaPredicted RBP12.17□□□□□ -0.46
ZKSCAN4-201ENST00000377294 CLN8Q9UBY8 286 aa12.17□□□□□ -0.46
ZKSCAN4-201ENST00000377294 URGCP-MRPS24S4R325 110 aa12.17□□□□□ -0.46
ZKSCAN4-201ENST00000377294 UBE2L5PA0A1B0GUS4 154 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 OR5H1A6NKK0 313 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 C17orf98A8MV24 154 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 C1orf196B1AJZ1 125 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 IFNA5P01569 189 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 RAB5AP20339 215 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 MEOX2P50222 304 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 RAB5BP61020 215 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 EDDM3AQ14507 147 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 WDR82Q6UXN9 313 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 LRP11Q86VZ4 500 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 LILRB2Q8N423 598 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 ZNF610Q8N9Z0 462 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 OR13A1Q8NGR1 328 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 ZDHHC16Q969W1 377 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 LIN7CQ9NUP9 197 aaKnown RBP12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 KIAA1456Q9P272 454 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 IGKV3-15P01624 115 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 IGHG3P01860 377 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 IL2RGP31785 369 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 COL10A1Q03692 680 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 INO80CQ6PI98 192 aaPredicted RBP12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 BEND4Q6ZU67 534 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 RPRMLQ8N4K4 120 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 OR8G5Q8NG78 346 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 TAAR6Q96RI8 345 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 RAB40CQ96S21 281 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 RBKSQ9H477 322 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 HES4Q9HCC6 221 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 ASCL3Q9NQ33 180 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 TREM2Q9NZC2 230 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 WSB1Q9Y6I7 421 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 ICE1Q9Y2F5 2266 aa12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 RP1L1Q8IWN7 2480 aaPredicted RBP12.16□□□□□ -0.46
ZKSCAN4-201ENST00000377294 TMEM30CPA0ZSE6 113 aa12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 ST8SIA5O15466 376 aa12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 OR2C1O95371 312 aa12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 CLDN1O95832 211 aa12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 MT-ND4LP03901 98 aa12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 DEFA4P12838 97 aa12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 CEACAM1P13688 526 aa12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 FOLR2P14207 255 aa12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 EGR1P18146 543 aa12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 HOXC12P31275 282 aa12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 ACP7Q6ZNF0 438 aa12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 LSM10Q969L4 123 aaKnown RBP12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 OR4C12Q96R67 309 aa12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 ACAA1P09110 424 aaPredicted RBP12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 UBE2KP61086 200 aa12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 S100A12P80511 92 aa12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 ZNF429Q86V71 674 aa12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 GALMQ96C23 342 aa12.15□□□□□ -0.46
ZKSCAN4-201ENST00000377294 IGHV3OR15-7A0A075B7D8 119 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 IGHV1-18A0A0C4DH31 117 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 A0A1B0GW64 132 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 LINC00473A8K010 186 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 DLK1P80370 383 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 RHEBQ15382 184 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 EIF2S3LQ2VIR3 472 aaKnown RBP12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 UTF1Q5T230 341 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 SLC16A13Q7RTY0 426 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 CD177Q8N6Q3 437 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 ZNF645Q8N7E2 425 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 SCGB1C1Q8TD33 95 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 TCTEX1D2Q8WW35 142 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 KCNIP1Q9NZI2 227 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 ZNF292O60281 2723 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 CACNA1GO43497 2377 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 ODAMA1E959 279 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 DFFBO76075 338 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 IGKV1D-33P01593 117 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 IGKV1-33P01594 117 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 SLC25A6P12236 298 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 AGAP20933 346 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 TAGLN2P37802 199 aaKnown RBP12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 TLE4Q04727 773 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 ZNF506Q5JVG8 444 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 FAM234AQ9H0X4 552 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 DKK4Q9UBT3 224 aa12.14□□□□□ -0.47
ZKSCAN4-201ENST00000377294 IGHV2OR16-5A0A0B4J2B6 119 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 CXCL1P09341 107 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 NQO2P16083 231 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 COX5AP20674 150 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 PAX6P26367 422 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms