RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 OR51J1Q9H342 316 aa16.43■□□□□ 0.22
VSX1-201ENST00000376707 CHMP1AQ9HD42 196 aaPredicted RBP16.43■□□□□ 0.22
VSX1-201ENST00000376707 PARP11Q9NR21 331 aa16.43■□□□□ 0.22
VSX1-201ENST00000376707 TRBV6-6A0A0A6YYG2 114 aa16.42■□□□□ 0.22
VSX1-201ENST00000376707 SEC14L6B5MCN3 397 aa16.42■□□□□ 0.22
VSX1-201ENST00000376707 ATP6V0E1O15342 81 aa16.42■□□□□ 0.22
VSX1-201ENST00000376707 HLA-DRB1P01911 266 aa16.42■□□□□ 0.22
VSX1-201ENST00000376707 ARSBP15848 533 aa16.42■□□□□ 0.22
VSX1-201ENST00000376707 CNTFRP26992 372 aa16.42■□□□□ 0.22
VSX1-201ENST00000376707 OR11H1Q8NG94 326 aa16.42■□□□□ 0.22
VSX1-201ENST00000376707 SETD6Q8TBK2 473 aa16.42■□□□□ 0.22
VSX1-201ENST00000376707 URM1Q9BTM9 101 aaKnown RBP16.42■□□□□ 0.22
VSX1-201ENST00000376707 RIMS4Q9H426 269 aaPredicted RBP16.42■□□□□ 0.22
VSX1-201ENST00000376707 PLGRKTQ9HBL7 147 aa16.42■□□□□ 0.22
VSX1-201ENST00000376707 PLEKHJ1Q9NW61 149 aa16.42■□□□□ 0.22
VSX1-201ENST00000376707 KIAA1456Q9P272 454 aa16.42■□□□□ 0.22
VSX1-201ENST00000376707 AK6Q9Y3D8 172 aaKnown RBP16.42■□□□□ 0.22
VSX1-201ENST00000376707 FOXI3A8MTJ6 420 aaPredicted RBP16.41■□□□□ 0.22
VSX1-201ENST00000376707 G3V318 75 aa16.41■□□□□ 0.22
VSX1-201ENST00000376707 PPIFP30405 207 aaKnown RBP16.41■□□□□ 0.22
VSX1-201ENST00000376707 MAP2K4P45985 399 aa16.41■□□□□ 0.22
VSX1-201ENST00000376707 FABP5Q01469 135 aa16.41■□□□□ 0.22
VSX1-201ENST00000376707 FHL3Q13643 280 aa16.41■□□□□ 0.22
VSX1-201ENST00000376707 P2RY14Q15391 338 aa16.41■□□□□ 0.22
VSX1-201ENST00000376707 TBCEQ15813 527 aaPredicted RBP16.41■□□□□ 0.22
VSX1-201ENST00000376707 C5orf64Q2M2E5 130 aa16.41■□□□□ 0.22
VSX1-201ENST00000376707 LIN54Q6MZP7 749 aa16.41■□□□□ 0.22
VSX1-201ENST00000376707 MOB1BQ7L9L4 216 aa16.41■□□□□ 0.22
VSX1-201ENST00000376707 UBE2E2Q96LR5 201 aa16.41■□□□□ 0.22
VSX1-201ENST00000376707 IFI27L2Q9H2X8 130 aa16.41■□□□□ 0.22
VSX1-201ENST00000376707 ACOT13Q9NPJ3 140 aa16.41■□□□□ 0.22
VSX1-201ENST00000376707 HSF4Q9ULV5 492 aa16.41■□□□□ 0.22
VSX1-201ENST00000376707 IGHV7-81A0A0B4J1V7 117 aa16.4■□□□□ 0.22
VSX1-201ENST00000376707 TRAV41A0A0B4J266 112 aa16.4■□□□□ 0.22
VSX1-201ENST00000376707 ST8SIA5O15466 376 aa16.4■□□□□ 0.22
VSX1-201ENST00000376707 SOCS1O15524 211 aa16.4■□□□□ 0.22
VSX1-201ENST00000376707 CALRP27797 417 aaKnown RBP16.4■□□□□ 0.22
VSX1-201ENST00000376707 ECI1P42126 302 aa16.4■□□□□ 0.22
VSX1-201ENST00000376707 RAB11BQ15907 218 aa16.4■□□□□ 0.22
VSX1-201ENST00000376707 FAM71F2Q6NXP2 309 aa16.4■□□□□ 0.22
VSX1-201ENST00000376707 NPBQ8NG41 125 aa16.4■□□□□ 0.22
VSX1-201ENST00000376707 MYOZ3Q8TDC0 251 aa16.4■□□□□ 0.22
VSX1-201ENST00000376707 KLK15Q9H2R5 256 aa16.4■□□□□ 0.22
VSX1-201ENST00000376707 PIPOXQ9P0Z9 390 aa16.4■□□□□ 0.22
VSX1-201ENST00000376707 BLOC1S6Q9UL45 172 aa16.4■□□□□ 0.22
VSX1-201ENST00000376707 VSIG4Q9Y279 399 aa16.4■□□□□ 0.22
VSX1-201ENST00000376707 RAB29O14966 203 aa16.39■□□□□ 0.21
VSX1-201ENST00000376707 RANBP1P43487 201 aa16.39■□□□□ 0.21
VSX1-201ENST00000376707 ZNF260Q3ZCT1 412 aa16.39■□□□□ 0.21
VSX1-201ENST00000376707 FAM131AQ6UXB0 335 aa16.39■□□□□ 0.21
VSX1-201ENST00000376707 ZNF367Q7RTV3 350 aa16.39■□□□□ 0.21
VSX1-201ENST00000376707 ZNF491Q8N8L2 437 aa16.39■□□□□ 0.21
VSX1-201ENST00000376707 CNBD2Q96M20 576 aa16.39■□□□□ 0.21
VSX1-201ENST00000376707 PRR25Q96S07 402 aa16.39■□□□□ 0.21
VSX1-201ENST00000376707 GNB4Q9HAV0 340 aa16.39■□□□□ 0.21
VSX1-201ENST00000376707 AK3Q9UIJ7 227 aa16.39■□□□□ 0.21
VSX1-201ENST00000376707 COL7A1Q02388 2944 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 ITGB1BP1O14713 200 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 LDLRAD4O15165 306 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 NDUFA3O95167 84 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 IGLV1-40P01703 118 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 OR8U8P0C7N1 319 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 PSMD7P51665 324 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 TMEM50BP56557 158 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 OR1N2Q8NGR9 330 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 FAM3DQ96BQ1 224 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 WWC2-AS2Q96NR7 200 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 OR5B12Q96R08 314 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 SLC23A1Q9UHI7 598 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 SCOCQ9UIL1 159 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 RAB26Q9ULW5 256 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 MGAT4AQ9UM21 535 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 V9GY05 133 aa16.38■□□□□ 0.21
VSX1-201ENST00000376707 I3L521 148 aa16.37■□□□□ 0.21
VSX1-201ENST00000376707 RAB9AP51151 201 aa16.37■□□□□ 0.21
VSX1-201ENST00000376707 RUNX1Q01196 453 aa16.37■□□□□ 0.21
VSX1-201ENST00000376707 ZNF616Q08AN1 781 aa16.37■□□□□ 0.21
VSX1-201ENST00000376707 KIAA0141Q14154 515 aaPredicted RBP16.37■□□□□ 0.21
VSX1-201ENST00000376707 PLGLAQ15195 96 aa16.37■□□□□ 0.21
VSX1-201ENST00000376707 SSX1Q16384 188 aa16.37■□□□□ 0.21
VSX1-201ENST00000376707 RPL39P5Q59GN2 51 aa16.37■□□□□ 0.21
VSX1-201ENST00000376707 HDHD3Q9BSH5 251 aaPredicted RBP16.37■□□□□ 0.21
VSX1-201ENST00000376707 C12orf4Q9NQ89 552 aa16.37■□□□□ 0.21
VSX1-201ENST00000376707 ERICH4A6NGS2 130 aa16.36■□□□□ 0.21
VSX1-201ENST00000376707 OR5H14A6NHG9 310 aa16.36■□□□□ 0.21
VSX1-201ENST00000376707 NHLRC4P0CG21 123 aaPredicted RBP16.36■□□□□ 0.21
VSX1-201ENST00000376707 CLDN12P56749 244 aa16.36■□□□□ 0.21
VSX1-201ENST00000376707 ECSCRQ19T08 205 aa16.36■□□□□ 0.21
VSX1-201ENST00000376707 C2orf76Q3KRA6 126 aa16.36■□□□□ 0.21
VSX1-201ENST00000376707 CD200R1LQ6Q8B3 271 aa16.36■□□□□ 0.21
VSX1-201ENST00000376707 MINDY2Q8NBR6 621 aa16.36■□□□□ 0.21
VSX1-201ENST00000376707 AGMATQ9BSE5 352 aa16.36■□□□□ 0.21
VSX1-201ENST00000376707 GHITMQ9H3K2 345 aa16.36■□□□□ 0.21
VSX1-201ENST00000376707 FBXL15Q9H469 300 aa16.36■□□□□ 0.21
VSX1-201ENST00000376707 NDUFB11Q9NX14 153 aa16.36■□□□□ 0.21
VSX1-201ENST00000376707 LSM4Q9Y4Z0 139 aaKnown RBP16.36■□□□□ 0.21
VSX1-201ENST00000376707 TRAV1-2A0A0B4J238 106 aa16.35■□□□□ 0.21
VSX1-201ENST00000376707 H7C2Y5 167 aa16.35■□□□□ 0.21
VSX1-201ENST00000376707 RRHO14718 337 aa16.35■□□□□ 0.21
VSX1-201ENST00000376707 GSTP1P09211 210 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms