RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 CABLES2Q9BTV7 478 aa12.81□□□□□ -0.36
HDHD3-202ENST00000374180 NPFFR1Q9GZQ6 430 aa12.81□□□□□ -0.36
HDHD3-202ENST00000374180 PARP12Q9H0J9 701 aaKnown RBP12.81□□□□□ -0.36
HDHD3-202ENST00000374180 C11orf54Q9H0W9 315 aaPredicted RBP12.81□□□□□ -0.36
HDHD3-202ENST00000374180 GHITMQ9H3K2 345 aa12.81□□□□□ -0.36
HDHD3-202ENST00000374180 RDH8Q9NYR8 311 aa12.81□□□□□ -0.36
HDHD3-202ENST00000374180 PIPOXQ9P0Z9 390 aa12.81□□□□□ -0.36
HDHD3-202ENST00000374180 TRBV6-7A0A0A0MS04 114 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 A0A1B0GUS0 222 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 RAB29O14966 203 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 TSPAN9O75954 239 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 DIRAS3O95661 229 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 SNRNP70P08621 437 aaKnown RBP12.8□□□□□ -0.36
HDHD3-202ENST00000374180 PTHLHP12272 177 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 ELK1P19419 428 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 TAS2R20P59543 309 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 HES1Q14469 280 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 Q6ZSV7 163 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 ODF3L1Q8IXM7 274 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 OR4C13Q8NGP0 309 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 BORCS5Q969J3 196 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 AKR1E2Q96JD6 320 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 GINS4Q9BRT9 223 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 AGMATQ9BSE5 352 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 DCUN1D5Q9BTE7 237 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 IFI27L2Q9H2X8 130 aa12.8□□□□□ -0.36
HDHD3-202ENST00000374180 IGHV3-72A0A0B4J1Y9 119 aa12.79□□□□□ -0.36
HDHD3-202ENST00000374180 FAM25AB3EWG3 89 aa12.79□□□□□ -0.36
HDHD3-202ENST00000374180 FAM25CB3EWG5 89 aa12.79□□□□□ -0.36
HDHD3-202ENST00000374180 FAM25GB3EWG6 89 aa12.79□□□□□ -0.36
HDHD3-202ENST00000374180 CTXN2P0C2S0 81 aa12.79□□□□□ -0.36
HDHD3-202ENST00000374180 OR3A3P47888 321 aa12.79□□□□□ -0.36
HDHD3-202ENST00000374180 HABP2Q14520 560 aaPredicted RBP12.79□□□□□ -0.36
HDHD3-202ENST00000374180 C16orf82Q7Z2V1 217 aa12.79□□□□□ -0.36
HDHD3-202ENST00000374180 C3orf56Q8N813 242 aa12.79□□□□□ -0.36
HDHD3-202ENST00000374180 DYNC2LI1Q8TCX1 351 aa12.79□□□□□ -0.36
HDHD3-202ENST00000374180 ABHD14BQ96IU4 210 aa12.79□□□□□ -0.36
HDHD3-202ENST00000374180 RBM14Q96PK6 669 aaKnown RBP12.79□□□□□ -0.36
HDHD3-202ENST00000374180 S1PR3Q99500 378 aa12.79□□□□□ -0.36
HDHD3-202ENST00000374180 SLC25A33Q9BSK2 321 aa12.79□□□□□ -0.36
HDHD3-202ENST00000374180 TOLLIPQ9H0E2 274 aa12.79□□□□□ -0.36
HDHD3-202ENST00000374180 C16orf95Q9H693 158 aa12.79□□□□□ -0.36
HDHD3-202ENST00000374180 RNF150Q9ULK6 438 aa12.79□□□□□ -0.36
HDHD3-202ENST00000374180 MRPS7Q9Y2R9 242 aaKnown RBP12.79□□□□□ -0.36
HDHD3-202ENST00000374180 MMP24Q9Y5R2 645 aa12.79□□□□□ -0.36
HDHD3-202ENST00000374180 SAA2-SAA4A0A096LPE2 208 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 CLPSL1A2RUU4 121 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 OR2F2O95006 317 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 IGKV1D-33P01593 117 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 IGKV1-33P01594 117 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 SAA2P0DJI9 122 aaPredicted RBP12.78□□□□□ -0.36
HDHD3-202ENST00000374180 CD1BP29016 333 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 CBX5P45973 191 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 HNF4GQ14541 408 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 FBLN7Q53RD9 439 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 CNIH2Q6PI25 160 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 LINC00299Q6ZSB3 139 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 ZNF833PQ6ZTB9 187 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 GVQW1Q8N7I0 195 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 BEST4Q8NFU0 473 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 LINC01006Q8NI28 216 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 RANBP3Q9H6Z4 567 aaPredicted RBP12.78□□□□□ -0.36
HDHD3-202ENST00000374180 PALMDQ9NP74 551 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 CCDC59Q9P031 241 aaKnown RBP12.78□□□□□ -0.36
HDHD3-202ENST00000374180 ANXA10Q9UJ72 324 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 ZNF221Q9UK13 617 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 DNHD1Q96M86 4753 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 RGS5O15539 181 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 HLA-DQB1P01920 261 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 TMEM11P17152 192 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 PRSS3P35030 304 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 HOGA1Q86XE5 327 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 PRSS22Q9GZN4 317 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 RNF114Q9Y508 228 aa12.78□□□□□ -0.36
HDHD3-202ENST00000374180 MEIS3P1A6NDR6 274 aa12.77□□□□□ -0.37
HDHD3-202ENST00000374180 ZNF736B4DX44 427 aaPredicted RBP12.77□□□□□ -0.37
HDHD3-202ENST00000374180 FCER2P06734 321 aa12.77□□□□□ -0.37
HDHD3-202ENST00000374180 OR8U9P0C7N5 309 aa12.77□□□□□ -0.37
HDHD3-202ENST00000374180 GPR12P47775 334 aa12.77□□□□□ -0.37
HDHD3-202ENST00000374180 ARPC4P59998 168 aa12.77□□□□□ -0.37
HDHD3-202ENST00000374180 BLCAPP62952 87 aa12.77□□□□□ -0.37
HDHD3-202ENST00000374180 EBI3Q14213 229 aa12.77□□□□□ -0.37
HDHD3-202ENST00000374180 RPL39P5Q59GN2 51 aa12.77□□□□□ -0.37
HDHD3-202ENST00000374180 FAM71F2Q6NXP2 309 aa12.77□□□□□ -0.37
HDHD3-202ENST00000374180 OR2T10Q8NGZ9 312 aa12.77□□□□□ -0.37
HDHD3-202ENST00000374180 OR8U1Q8NH10 309 aa12.77□□□□□ -0.37
HDHD3-202ENST00000374180 OR2T6Q8NHC8 308 aa12.77□□□□□ -0.37
HDHD3-202ENST00000374180 PPP1R14BQ96C90 147 aa12.77□□□□□ -0.37
HDHD3-202ENST00000374180 EAF1Q96JC9 268 aaPredicted RBP12.77□□□□□ -0.37
HDHD3-202ENST00000374180 MRPL20Q9BYC9 149 aaKnown RBP12.77□□□□□ -0.37
HDHD3-202ENST00000374180 IFT46Q9NQC8 304 aa12.77□□□□□ -0.37
HDHD3-202ENST00000374180 RBM7Q9Y580 266 aaKnown RBP12.77□□□□□ -0.37
HDHD3-202ENST00000374180 A0A1B0GVG6 124 aa12.76□□□□□ -0.37
HDHD3-202ENST00000374180 M0QZK8 103 aa12.76□□□□□ -0.37
HDHD3-202ENST00000374180 CTDSP2O14595 271 aa12.76□□□□□ -0.37
HDHD3-202ENST00000374180 SNX29P2Q8IUI4 249 aa12.76□□□□□ -0.37
HDHD3-202ENST00000374180 H1FOOQ8IZA3 346 aaPredicted RBP12.76□□□□□ -0.37
HDHD3-202ENST00000374180 NABP2Q9BQ15 211 aa12.76□□□□□ -0.37
HDHD3-202ENST00000374180 ZNF251Q9BRH9 671 aa12.76□□□□□ -0.37
HDHD3-202ENST00000374180 SIGLEC9Q9Y336 463 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms