RNA–Protein interactions for RNA: ENST00000368453.8

SHC1-205, Transcript of SHC adaptor protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHC1, Length 3,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-205ENST00000368453 DIRC3C9JPN6 131 aa12.77□□□□□ -0.37
SHC1-205ENST00000368453 F6UZH7 168 aa12.77□□□□□ -0.37
SHC1-205ENST00000368453 COX5AP20674 150 aa12.77□□□□□ -0.37
SHC1-205ENST00000368453 GPM6AP51674 278 aa12.77□□□□□ -0.37
SHC1-205ENST00000368453 SPATA45Q537H7 98 aa12.77□□□□□ -0.37
SHC1-205ENST00000368453 MCEMP1Q8IX19 187 aa12.77□□□□□ -0.37
SHC1-205ENST00000368453 ZNF114Q8NC26 417 aa12.77□□□□□ -0.37
SHC1-205ENST00000368453 OR2M3Q8NG83 312 aa12.77□□□□□ -0.37
SHC1-205ENST00000368453 OR6C1Q96RD1 312 aa12.77□□□□□ -0.37
SHC1-205ENST00000368453 WIPI2Q9Y4P8 454 aa12.77□□□□□ -0.37
SHC1-205ENST00000368453 CFAP54Q96N23 3096 aa12.77□□□□□ -0.37
SHC1-205ENST00000368453 KIAA1324LA8MWY0 1029 aaPredicted RBP12.76□□□□□ -0.37
SHC1-205ENST00000368453 PMCHP20382 165 aa12.76□□□□□ -0.37
SHC1-205ENST00000368453 HINT1P49773 126 aaPredicted RBP12.76□□□□□ -0.37
SHC1-205ENST00000368453 PAFAH1B2P68402 229 aa12.76□□□□□ -0.37
SHC1-205ENST00000368453 FBXW9Q5XUX1 488 aa12.76□□□□□ -0.37
SHC1-205ENST00000368453 TEX43Q6ZNM6 134 aa12.76□□□□□ -0.37
SHC1-205ENST00000368453 CPEB3Q8NE35 698 aaKnown RBP12.76□□□□□ -0.37
SHC1-205ENST00000368453 PSMF1Q92530 271 aa12.76□□□□□ -0.37
SHC1-205ENST00000368453 CLDN23Q96B33 292 aa12.76□□□□□ -0.37
SHC1-205ENST00000368453 ZNF501Q96CX3 271 aaPredicted RBP12.76□□□□□ -0.37
SHC1-205ENST00000368453 SIRPB1O00241 398 aa12.76□□□□□ -0.37
SHC1-205ENST00000368453 FCN1O00602 326 aa12.76□□□□□ -0.37
SHC1-205ENST00000368453 CCL25O15444 150 aa12.76□□□□□ -0.37
SHC1-205ENST00000368453 ZXDAP98168 799 aa12.76□□□□□ -0.37
SHC1-205ENST00000368453 TFF3Q07654 80 aa12.76□□□□□ -0.37
SHC1-205ENST00000368453 SAPCD1Q5SSQ6 148 aa12.76□□□□□ -0.37
SHC1-205ENST00000368453 KIAA0895LQ68EN5 471 aa12.76□□□□□ -0.37
SHC1-205ENST00000368453 STARD4Q96DR4 205 aa12.76□□□□□ -0.37
SHC1-205ENST00000368453 ZNF552Q9H707 407 aaPredicted RBP12.76□□□□□ -0.37
SHC1-205ENST00000368453 CLN8Q9UBY8 286 aa12.76□□□□□ -0.37
SHC1-205ENST00000368453 RNF24Q9Y225 148 aa12.76□□□□□ -0.37
SHC1-205ENST00000368453 CBY3A6NI87 242 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 KRASP01116 189 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 IGHV3-9P01782 118 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 IER3P46695 156 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 TGFBR3Q03167 851 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 ATOH7Q8N100 152 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 ZNF488Q96MN9 340 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 MRPL18Q9H0U6 180 aaKnown RBP12.75□□□□□ -0.37
SHC1-205ENST00000368453 ELOVL5Q9NYP7 299 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 OR2W1Q9Y3N9 320 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 LTBP2Q14767 1821 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 FER1L5A0AVI2 2057 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 ATG2AQ2TAZ0 1938 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 CBR3O75828 277 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 VENTXO95231 258 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 WNT10AQ9GZT5 417 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 WNT5BQ9H1J7 359 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 OR1A1Q9P1Q5 309 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 TRAV38-1A0A0B4J264 116 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 SLC17A3O00476 420 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 SH2D1BO14796 132 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 IGKV1-39P01597 117 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 IGKV1-5P01602 117 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 IGKV1D-39P04432 117 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 GNB1P62873 340 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 ASCL4Q6XD76 172 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 C20orf204Q6ZNR8 217 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 ERASQ7Z444 233 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 ANKRD37Q7Z713 158 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 CADM4Q8NFZ8 388 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 MTIF3Q9H2K0 278 aaKnown RBP12.75□□□□□ -0.37
SHC1-205ENST00000368453 ZNF586Q9NXT0 402 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 ATP23Q9Y6H3 246 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 GTF3C1Q12789 2109 aa12.75□□□□□ -0.37
SHC1-205ENST00000368453 CTXN2P0C2S0 81 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 CEACAM8P31997 349 aaPredicted RBP12.74□□□□□ -0.37
SHC1-205ENST00000368453 AMTP48728 403 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 UBE2NP61088 152 aaKnown RBP12.74□□□□□ -0.37
SHC1-205ENST00000368453 KIAA1644Q3SXP7 199 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 FAM27BQ5VT28 67 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 UNQ5815/PRO19632Q6UWF5 114 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 APH1AQ96BI3 265 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 SFRP2Q96HF1 295 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 CCDC74BQ96LY2 380 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 PTPRSQ13332 1948 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 EML6Q6ZMW3 1958 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 USF3Q68DE3 2245 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 LILRA5A6NI73 299 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 TRAPPC2LH3BP13 241 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 LINC01565O15544 149 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 RBFOX2O43251 390 aaKnown RBP eCLIP12.74□□□□□ -0.37
SHC1-205ENST00000368453 CDC34P49427 236 aaPredicted RBP12.74□□□□□ -0.37
SHC1-205ENST00000368453 GCSAMLQ5JQS6 135 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 C10orf128Q5T292 105 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 FBXO46Q6PJ61 603 aaPredicted RBP12.74□□□□□ -0.37
SHC1-205ENST00000368453 OR5P3Q8WZ94 311 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 DEFB126Q9BYW3 111 aa12.74□□□□□ -0.37
SHC1-205ENST00000368453 A0A1W2PPV4 95 aa12.73□□□□□ -0.37
SHC1-205ENST00000368453 TNFSF11O14788 317 aa12.73□□□□□ -0.37
SHC1-205ENST00000368453 SYNGR3O43761 229 aa12.73□□□□□ -0.37
SHC1-205ENST00000368453 CCL2P13500 99 aa12.73□□□□□ -0.37
SHC1-205ENST00000368453 CRYGSP22914 178 aa12.73□□□□□ -0.37
SHC1-205ENST00000368453 C9orf135Q5VTT2 229 aa12.73□□□□□ -0.37
SHC1-205ENST00000368453 MKXQ8IYA7 352 aa12.73□□□□□ -0.37
SHC1-205ENST00000368453 TP53TG3Q9ULZ0 132 aa12.73□□□□□ -0.37
SHC1-205ENST00000368453 DOCK7Q96N67 2140 aa12.73□□□□□ -0.37
SHC1-205ENST00000368453 SNURFLB1AK76 121 aa12.73□□□□□ -0.37
SHC1-205ENST00000368453 S100A7P31151 101 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms