RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 KBTBD11-OT1A0A1B0GTJ5 212 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 MSGN1A6NI15 193 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 YPEL1O60688 119 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 IGHV3-7P01780 117 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 CGB3P0DN86 165 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 CGB7P0DN87 165 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 EPHA1P21709 976 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 UBA52P62987 128 aaKnown RBP12.4□□□□□ -0.42
NEK2-201ENST00000366998 CATR1Q13166 79 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 NMSQ5H8A3 153 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 LYPD2Q6UXB3 125 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 TCF23Q7RTU1 214 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 OR4D5Q8NGN0 318 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 YPEL2Q96QA6 119 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 ARPC5LQ9BPX5 153 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 ZNF471Q9BX82 626 aaPredicted RBP12.4□□□□□ -0.42
NEK2-201ENST00000366998 ZFP57Q9NU63 452 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 CLN8Q9UBY8 286 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 IGSF10Q6WRI0 2623 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 hADV38S2A0JD32 116 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 ZNF729A6NN14 1252 aaPredicted RBP12.4□□□□□ -0.42
NEK2-201ENST00000366998 F5H0A9 414 aaPredicted RBP12.4□□□□□ -0.42
NEK2-201ENST00000366998 LYNX1G3V0Z9 82 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 ST8SIA3O43173 380 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 NDUFB3O43676 98 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 LYNX1P0DP58 116 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 GPR12P47775 334 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 AKR1C2P52895 323 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 LOXL3P58215 753 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 MSMO1Q15800 293 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 OR2B11Q5JQS5 317 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 ALKAL2Q6UX46 152 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 TCTEX1D2Q8WW35 142 aa12.4□□□□□ -0.42
NEK2-201ENST00000366998 CACNA1BQ00975 2339 aa12.39□□□□□ -0.43
NEK2-201ENST00000366998 NFYBP25208 207 aa12.39□□□□□ -0.43
NEK2-201ENST00000366998 RPL30P62888 115 aaKnown RBP12.39□□□□□ -0.43
NEK2-201ENST00000366998 LRRC10Q5BKY1 277 aa12.39□□□□□ -0.43
NEK2-201ENST00000366998 H1FXQ92522 213 aaKnown RBP12.39□□□□□ -0.43
NEK2-201ENST00000366998 LEAP2Q969E1 77 aa12.39□□□□□ -0.43
NEK2-201ENST00000366998 AQP10Q96PS8 301 aa12.39□□□□□ -0.43
NEK2-201ENST00000366998 CBLN4Q9NTU7 201 aa12.39□□□□□ -0.43
NEK2-201ENST00000366998 SDHAF2Q9NX18 166 aa12.39□□□□□ -0.43
NEK2-201ENST00000366998 GFOD1Q9NXC2 390 aa12.39□□□□□ -0.43
NEK2-201ENST00000366998 IDI2-AS1Q9NZ38 188 aa12.39□□□□□ -0.43
NEK2-201ENST00000366998 RCL1Q9Y2P8 373 aaKnown RBP12.39□□□□□ -0.43
NEK2-201ENST00000366998 E5RGE8 158 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 CLDN1O95832 211 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 IGKV1-39P01597 117 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 IGKV1D-39P04432 117 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 COL8A2P25067 703 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 NKX2-1P43699 371 aaPredicted RBP12.38□□□□□ -0.43
NEK2-201ENST00000366998 RPL31P62899 125 aaKnown RBP12.38□□□□□ -0.43
NEK2-201ENST00000366998 ZNF585BQ52M93 769 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 ST8SIA2Q92186 375 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 CORO2AQ92828 525 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 AGMATQ9BSE5 352 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 RAB1BQ9H0U4 201 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 C19orf12Q9NSK7 152 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 NSG2Q9Y328 171 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 POMT1Q9Y6A1 747 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 LINC00312Q9Y6C7 94 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 LRBAP50851 2863 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 USP24Q9UPU5 2620 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 A0A0G2JRQ6 117 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 B8ZZF3 427 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 NXPH3O95157 252 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 RPL12P30050 165 aaKnown RBP12.38□□□□□ -0.43
NEK2-201ENST00000366998 LPAR6P43657 344 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 RAB14P61106 215 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 EIF4EBP1Q13541 118 aaPredicted RBP12.38□□□□□ -0.43
NEK2-201ENST00000366998 PRAMEF5Q5TYX0 476 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 PCNPQ8WW12 178 aaKnown RBP12.38□□□□□ -0.43
NEK2-201ENST00000366998 GPR146Q96CH1 333 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 CTSZQ9UBR2 303 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 USF3Q68DE3 2245 aa12.38□□□□□ -0.43
NEK2-201ENST00000366998 CLEC18AA5D8T8 446 aa12.37□□□□□ -0.43
NEK2-201ENST00000366998 C19orf84I3L1E1 186 aa12.37□□□□□ -0.43
NEK2-201ENST00000366998 DVL1O14640 695 aa12.37□□□□□ -0.43
NEK2-201ENST00000366998 TNFRSF13BO14836 293 aaPredicted RBP12.37□□□□□ -0.43
NEK2-201ENST00000366998 HKR1P10072 659 aa12.37□□□□□ -0.43
NEK2-201ENST00000366998 MEF2CQ06413 473 aaPredicted RBP12.37□□□□□ -0.43
NEK2-201ENST00000366998 ZNF816Q0VGE8 651 aaPredicted RBP12.37□□□□□ -0.43
NEK2-201ENST00000366998 ZNF273Q14593 569 aa12.37□□□□□ -0.43
NEK2-201ENST00000366998 ZNF66Q6ZN08 573 aa12.37□□□□□ -0.43
NEK2-201ENST00000366998 SPAG16Q8N0X2 631 aa12.37□□□□□ -0.43
NEK2-201ENST00000366998 CLEC18CQ8NCF0 446 aa12.37□□□□□ -0.43
NEK2-201ENST00000366998 SCARB1Q8WTV0 552 aa12.37□□□□□ -0.43
NEK2-201ENST00000366998 FAM216AQ8WUB2 273 aa12.37□□□□□ -0.43
NEK2-201ENST00000366998 HSD17B10Q99714 261 aaKnown RBP12.37□□□□□ -0.43
NEK2-201ENST00000366998 ABHD14AQ9BUJ0 271 aa12.37□□□□□ -0.43
NEK2-201ENST00000366998 GAL3ST2Q9H3Q3 398 aa12.37□□□□□ -0.43
NEK2-201ENST00000366998 PLEKHA2Q9HB19 425 aa12.37□□□□□ -0.43
NEK2-201ENST00000366998 HRNRQ86YZ3 2850 aaPredicted RBP12.37□□□□□ -0.43
NEK2-201ENST00000366998 A0A1W2PPE3 182 aa12.36□□□□□ -0.43
NEK2-201ENST00000366998 C17orf98A8MV24 154 aa12.36□□□□□ -0.43
NEK2-201ENST00000366998 SLC31A2O15432 143 aa12.36□□□□□ -0.43
NEK2-201ENST00000366998 NDUFA2O43678 99 aa12.36□□□□□ -0.43
NEK2-201ENST00000366998 RAMP3O60896 148 aa12.36□□□□□ -0.43
NEK2-201ENST00000366998 FCN3O75636 299 aa12.36□□□□□ -0.43
NEK2-201ENST00000366998 SOD3P08294 240 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms