RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 PARLQ9H300 379 aa11.52□□□□□ -0.57
PRKN-205ENST00000366897 TMEM242Q9NWH2 141 aa11.52□□□□□ -0.57
PRKN-205ENST00000366897 RNF150Q9ULK6 438 aa11.52□□□□□ -0.57
PRKN-205ENST00000366897 DUXBA0A1W2PPF3 345 aa11.52□□□□□ -0.57
PRKN-205ENST00000366897 CD33P20138 364 aa11.52□□□□□ -0.57
PRKN-205ENST00000366897 LRRC75BQ2VPJ9 315 aa11.52□□□□□ -0.57
PRKN-205ENST00000366897 TMEM41BQ5BJD5 291 aa11.52□□□□□ -0.57
PRKN-205ENST00000366897 SPATA46Q5T0L3 261 aa11.52□□□□□ -0.57
PRKN-205ENST00000366897 SF3B5Q9BWJ5 86 aaKnown RBP11.52□□□□□ -0.57
PRKN-205ENST00000366897 C1QTNF5Q9BXJ0 243 aa11.52□□□□□ -0.57
PRKN-205ENST00000366897 WDR61Q9GZS3 305 aaKnown RBP11.52□□□□□ -0.57
PRKN-205ENST00000366897 NAT8Q9UHE5 227 aa11.52□□□□□ -0.57
PRKN-205ENST00000366897 PRR14LQ5THK1 2151 aa11.52□□□□□ -0.57
PRKN-205ENST00000366897 TCAPO15273 167 aa11.51□□□□□ -0.57
PRKN-205ENST00000366897 KLF7O75840 302 aaPredicted RBP11.51□□□□□ -0.57
PRKN-205ENST00000366897 IGLV2-14P01704 120 aa11.51□□□□□ -0.57
PRKN-205ENST00000366897 HOXA4Q00056 320 aaPredicted RBP11.51□□□□□ -0.57
PRKN-205ENST00000366897 SLC38A11Q08AI6 406 aa11.51□□□□□ -0.57
PRKN-205ENST00000366897 TMPRSS7Q7RTY8 843 aa11.51□□□□□ -0.57
PRKN-205ENST00000366897 TAF15Q92804 592 aaKnown RBP eCLIP11.51□□□□□ -0.57
PRKN-205ENST00000366897 DDA1Q9BW61 102 aa11.51□□□□□ -0.57
PRKN-205ENST00000366897 CEP250Q9BV73 2442 aa11.51□□□□□ -0.57
PRKN-205ENST00000366897 C1QTNF9BB2RNN3 333 aa11.51□□□□□ -0.57
PRKN-205ENST00000366897 PCBD1P61457 104 aa11.51□□□□□ -0.57
PRKN-205ENST00000366897 ZNF585BQ52M93 769 aa11.51□□□□□ -0.57
PRKN-205ENST00000366897 MRPL41Q8IXM3 137 aaKnown RBP11.51□□□□□ -0.57
PRKN-205ENST00000366897 REPIN1Q9BWE0 567 aaKnown RBP11.51□□□□□ -0.57
PRKN-205ENST00000366897 DEPPQ9NTK1 212 aa11.51□□□□□ -0.57
PRKN-205ENST00000366897 CBLN4Q9NTU7 201 aa11.51□□□□□ -0.57
PRKN-205ENST00000366897 PINLYPA6NC86 204 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 SIRPB1O00241 398 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 DVL1O14640 695 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 S100GP29377 79 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 ABLIM2Q6H8Q1 611 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 OR5P3Q8WZ94 311 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 SPSB4Q96A44 273 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 OR5B12Q96R08 314 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 PGPEP1LA6NFU8 196 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 TOX3O15405 576 aaPredicted RBP11.5□□□□□ -0.57
PRKN-205ENST00000366897 CRYAAP02489 173 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 SELEP16581 610 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 Q6ZS49 121 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 CYP2G1PQ6ZSU1 146 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 CLN8Q9UBY8 286 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 ZNF391Q9UJN7 358 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 GJE1A6NN92 205 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 MKRN2OSH3BPM6 223 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 PAGE4O60829 102 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 KBTBD11O94819 623 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 KRASP01116 189 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 P04436 131 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 GDF1P27539 372 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 HBG1P69891 147 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 HBG2P69892 147 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 CEACAM21Q3KPI0 293 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 IL22RA2Q969J5 263 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 C2orf88Q9BSF0 95 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 NDUFAF3Q9BU61 184 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 SH2D2AQ9NP31 389 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 PARD6AQ9NPB6 346 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 DLL3Q9NYJ7 618 aa11.5□□□□□ -0.57
PRKN-205ENST00000366897 DSPP15924 2871 aaKnown RBP11.49□□□□□ -0.57
PRKN-205ENST00000366897 IFNA1P01562 189 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 COL8A2P25067 703 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 OTX2P32243 289 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 TFF3Q07654 80 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 TEX38Q6PEX7 206 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 Q8NFD4 153 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 P2RX4Q99571 388 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 CTDSP1Q9GZU7 261 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 ARRDC1-AS1Q9H2J1 176 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 HIPK2Q9H2X6 1198 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 LOC102723996A0A087X1L8 192 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 RAMP3O60896 148 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 MRPL33O75394 65 aaKnown RBP11.49□□□□□ -0.57
PRKN-205ENST00000366897 CTXN2P0C2S0 81 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 LINC00205P59089 165 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 UBE2G2P60604 165 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 RNPS1Q15287 305 aaKnown RBP11.49□□□□□ -0.57
PRKN-205ENST00000366897 PMS2CLQ68D20 193 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 ZNF808Q8N4W9 903 aaPredicted RBP11.49□□□□□ -0.57
PRKN-205ENST00000366897 DNASE2BQ8WZ79 361 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 RAB24Q969Q5 203 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 PSMG3Q9BT73 122 aaPredicted RBP11.49□□□□□ -0.57
PRKN-205ENST00000366897 PRDM14Q9GZV8 571 aa11.49□□□□□ -0.57
PRKN-205ENST00000366897 CELA3AP09093 270 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 PAX1P15863 534 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 CA6P23280 308 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 SRD5A2P31213 254 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 ZNF816Q0VGE8 651 aaPredicted RBP11.48□□□□□ -0.57
PRKN-205ENST00000366897 AGBL5Q8NDL9 886 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 OR51I2Q9H344 312 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 A0A0U1RQK1 487 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 GYPAP02724 150 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 HNF1AP20823 631 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 EPHA8P29322 1005 aaPredicted RBP11.48□□□□□ -0.57
PRKN-205ENST00000366897 G6PCP35575 357 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 WNT5AP41221 380 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 PSMB3P49720 205 aa11.48□□□□□ -0.57
PRKN-205ENST00000366897 SERF2P84101 59 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms