RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 ERVS71-1P61550 626 aa13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 LCN15Q6UWW0 184 aa13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 DPPA3Q6W0C5 159 aa13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 HIST3H2BBQ8N257 126 aa13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 ZNF525Q8N782 197 aa13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 LSM10Q969L4 123 aaKnown RBP13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 GUCD1Q96NT3 240 aa13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 ZNF665Q9H7R5 613 aa13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 PSENENQ9NZ42 101 aa13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 KCNS2Q9ULS6 477 aa13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 TRAV1-1A0A0B4J248 108 aa13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 LOC400499M0QZD8 3231 aa13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 TRGC1P0CF51 173 aa13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 GLIPR1P48060 266 aa13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 FGF8P55075 233 aaPredicted RBP13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 GTF3C1Q12789 2109 aa13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 FBXW9Q5XUX1 488 aa13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 COLQQ9Y215 455 aaPredicted RBP13.13□□□□□ -0.31
CNKSR1-201ENST00000361530 CDIPTO14735 213 aa13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 WNT2P09544 360 aa13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 MPLP40238 635 aa13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 ERVK11-1P61568 191 aa13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 RNFT1Q5M7Z0 435 aa13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 FAM53AQ6NSI3 398 aaPredicted RBP13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 OR2J1Q9GZK6 312 aa13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 OR5H1A6NKK0 313 aa13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 ZFP92A6NM28 416 aa13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 CEACAM6P40199 344 aa13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 RAB11AP62491 216 aa13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 HOXA4Q00056 320 aaPredicted RBP13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 SLC10A1Q14973 349 aa13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 FAM90A2PQ658T7 463 aa13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 SCGB1C1Q8TD33 95 aa13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 FRZBQ92765 325 aa13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 FAM210BQ96KR6 192 aa13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 SIRT7Q9NRC8 400 aa13.12□□□□□ -0.31
CNKSR1-201ENST00000361530 LNP1A1A4G5 178 aa13.11□□□□□ -0.31
CNKSR1-201ENST00000361530 C21orf140B9A014 251 aa13.11□□□□□ -0.31
CNKSR1-201ENST00000361530 DRAM1Q8N682 238 aa13.11□□□□□ -0.31
CNKSR1-201ENST00000361530 MDS2Q8NDY4 140 aa13.11□□□□□ -0.31
CNKSR1-201ENST00000361530 WDYHV1Q96HA8 205 aa13.11□□□□□ -0.31
CNKSR1-201ENST00000361530 RTL8AQ9BWD3 113 aa13.11□□□□□ -0.31
CNKSR1-201ENST00000361530 CEBPDP49716 269 aaPredicted RBP13.11□□□□□ -0.31
CNKSR1-201ENST00000361530 SPANXN5Q5MJ07 72 aa13.11□□□□□ -0.31
CNKSR1-201ENST00000361530 FAM180AQ6UWF9 173 aa13.11□□□□□ -0.31
CNKSR1-201ENST00000361530 UNQ6494/PRO21346Q6UXR6 183 aa13.11□□□□□ -0.31
CNKSR1-201ENST00000361530 SLC35E3Q7Z769 313 aa13.11□□□□□ -0.31
CNKSR1-201ENST00000361530 ABHD5Q8WTS1 349 aa13.11□□□□□ -0.31
CNKSR1-201ENST00000361530 SPRR3Q9UBC9 169 aa13.11□□□□□ -0.31
CNKSR1-201ENST00000361530 OR14J1Q9UGF5 321 aa13.11□□□□□ -0.31
CNKSR1-201ENST00000361530 MDKP21741 143 aaPredicted RBP13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 G0S2P27469 103 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 CD200P41217 278 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 ATP1A1-AS1Q5TC04 95 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 ZNF787Q6DD87 383 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 RCC1LQ96I51 464 aaKnown RBP13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 OR4C12Q96R67 309 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 ELOA3CA0A087WX78 387 aaPredicted RBP13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 A0A087X0M5 115 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 TMEM238LA0A1B0GVL6 79 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 A0A1B0GX30 115 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 LRP5LA4QPB2 252 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 PTBP3O95758 552 aaKnown RBP13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 DDTP30046 118 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 MDH2P40926 338 aaKnown RBP13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 HNF4GQ14541 408 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 LRRC75BQ2VPJ9 315 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 TMEM164Q5U3C3 297 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 FGFRL1Q8N441 504 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 LURAP1Q96LR2 239 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 MBNL3Q9NUK0 354 aaKnown RBP13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 RNF150Q9ULK6 438 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 KLF13Q9Y2Y9 288 aaPredicted RBP13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 CHD3Q12873 2000 aaKnown RBP13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 NBEAQ8NFP9 2946 aa13.1□□□□□ -0.31
CNKSR1-201ENST00000361530 TSTD3H0UI37 97 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 KLRC4-KLRK1H3BQV0 150 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 SMPD2O60906 423 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 NXPH2O95156 264 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 ZNF883P0CG24 379 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 BCL2P10415 239 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 IDH3GP51553 393 aaPredicted RBP13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 PPP1CBP62140 327 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 TBC1D28Q2M2D7 210 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 MOB1BQ7L9L4 216 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 C1orf87Q8N0U7 546 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 MBD3L1Q8WWY6 194 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 SNX22Q96L94 193 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 SSX3Q99909 188 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 TMEM9BQ9NQ34 198 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 CACNA1DQ01668 2161 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 GRPP07492 148 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 PGA5P0DJD9 388 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 OR10G4Q8NGN3 311 aa13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 NANOS1Q8WY41 292 aaKnown RBP13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 PACRGQ96M98 296 aaPredicted RBP13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 LIN7CQ9NUP9 197 aaKnown RBP13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 CISD1Q9NZ45 108 aaKnown RBP13.09□□□□□ -0.31
CNKSR1-201ENST00000361530 WIPI2Q9Y4P8 454 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms