RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 OR1L1Q8NH94 360 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 WDR61Q9GZS3 305 aaKnown RBP7.24□□□□□ -1.25
RFX3-202ENST00000358730 OBP2BQ9NPH6 170 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 CISD1Q9NZ45 108 aaKnown RBP7.24□□□□□ -1.25
RFX3-202ENST00000358730 KCNIP1Q9NZI2 227 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 CACNA1DQ01668 2161 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 TMEM30CPA0ZSE6 113 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 CXorf65A6NEN9 183 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 IQCF6A8MYZ5 107 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 PPIHO43447 177 aaKnown RBP7.23□□□□□ -1.25
RFX3-202ENST00000358730 GLIPR1P48060 266 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 SERF2P84101 59 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 HOXA4Q00056 320 aaPredicted RBP7.23□□□□□ -1.25
RFX3-202ENST00000358730 PSG7Q13046 419 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 GABRA6Q16445 453 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 TMEM41BQ5BJD5 291 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 TMEM178AQ8NBL3 297 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 OR4C12Q96R67 309 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 TINAGQ9UJW2 476 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 DOCK11Q5JSL3 2073 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 MAP1LC3B2A6NCE7 125 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 CDX4O14627 284 aaPredicted RBP7.23□□□□□ -1.25
RFX3-202ENST00000358730 WNT9BO14905 357 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 CYB5BO43169 146 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 YIF1AO95070 293 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 KRASP01116 189 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 SP9P0CG40 484 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 IL2RGP31785 369 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 MPV17P39210 176 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 TNFRSF9Q07011 255 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 ZNF816Q0VGE8 651 aaPredicted RBP7.23□□□□□ -1.25
RFX3-202ENST00000358730 ZNF826PQ6ZT77 177 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 ZNF610Q8N9Z0 462 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 MBD3L1Q8WWY6 194 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 GALMQ96C23 342 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 MAP1LC3BQ9GZQ8 125 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 RBKSQ9H477 322 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 ZDHHC11Q9H8X9 412 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 GSN-AS1Q9NRJ2 163 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 TMEM210A6NLX4 147 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 CEBPZOSA8MTT3 80 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 LINC00587B1AMM8 73 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 C12orf77C9JDV5 145 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 FAM90A26D6RGX4 464 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 G6PCP35575 357 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 NDUFA6P56556 154 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 FAM53AQ6NSI3 398 aaPredicted RBP7.23□□□□□ -1.25
RFX3-202ENST00000358730 KLF14Q8TD94 323 aaPredicted RBP7.23□□□□□ -1.25
RFX3-202ENST00000358730 TAF15Q92804 592 aaKnown RBP eCLIP7.23□□□□□ -1.25
RFX3-202ENST00000358730 TMPRSS5Q9H3S3 457 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 PRR14LQ5THK1 2151 aa7.23□□□□□ -1.25
RFX3-202ENST00000358730 B4DEV8 164 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 IFNA1P01562 189 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 GABRA2P47869 451 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 AESQ08117 197 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 PNRC1Q12796 327 aaPredicted RBP7.22□□□□□ -1.25
RFX3-202ENST00000358730 OR52L2PQ8NGH6 319 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 CA5BP1Q8WTZ4 195 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 NINJ1Q92982 152 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 PINX1Q96BK5 328 aaKnown RBP7.22□□□□□ -1.25
RFX3-202ENST00000358730 MLNRO43193 412 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 S1PR2O95136 353 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 HBZP02008 142 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 TFF1P04155 84 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 HOXC12P31275 282 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 RPL30P62888 115 aaKnown RBP7.22□□□□□ -1.25
RFX3-202ENST00000358730 CATR1Q13166 79 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 MSMO1Q15800 293 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 BTNL3Q6UXE8 466 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 TMEM14EPQ6UXP3 125 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 MRGPRGQ86SM5 289 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 C1orf87Q8N0U7 546 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 CNEP1R1Q8N9A8 125 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 MRGPRDQ8TDS7 321 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 C5orf30Q96GV9 206 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 TRIB1Q96RU8 372 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 HES4Q9HCC6 221 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 DOK5Q9P104 306 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 CLN8Q9UBY8 286 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 HSPB7Q9UBY9 170 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 MIOXQ9UGB7 285 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 VAX2Q9UIW0 290 aa7.22□□□□□ -1.25
RFX3-202ENST00000358730 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.21□□□□□ -1.25
RFX3-202ENST00000358730 ODAMA1E959 279 aa7.21□□□□□ -1.25
RFX3-202ENST00000358730 OOEPA6NGQ2 149 aa7.21□□□□□ -1.25
RFX3-202ENST00000358730 CYB5R3P00387 301 aaPredicted RBP7.21□□□□□ -1.25
RFX3-202ENST00000358730 ACSF3Q4G176 576 aaPredicted RBP7.21□□□□□ -1.25
RFX3-202ENST00000358730 PLA2G2CQ5R387 149 aa7.21□□□□□ -1.25
RFX3-202ENST00000358730 BEND4Q6ZU67 534 aa7.21□□□□□ -1.25
RFX3-202ENST00000358730 LHX4Q969G2 390 aa7.21□□□□□ -1.25
RFX3-202ENST00000358730 P2RX4Q99571 388 aa7.21□□□□□ -1.25
RFX3-202ENST00000358730 PARD6GQ9BYG4 376 aaPredicted RBP7.21□□□□□ -1.25
RFX3-202ENST00000358730 TOLLIPQ9H0E2 274 aa7.21□□□□□ -1.25
RFX3-202ENST00000358730 CLCF1Q9UBD9 225 aa7.21□□□□□ -1.25
RFX3-202ENST00000358730 LOC400499M0QZD8 3231 aa7.21□□□□□ -1.26
RFX3-202ENST00000358730 HMGB3O15347 200 aaKnown RBP7.21□□□□□ -1.26
RFX3-202ENST00000358730 AGFG2O95081 481 aa7.21□□□□□ -1.26
RFX3-202ENST00000358730 IGKV1D-33P01593 117 aa7.21□□□□□ -1.26
RFX3-202ENST00000358730 IGKV1-33P01594 117 aa7.21□□□□□ -1.26
RFX3-202ENST00000358730 TRGC2P03986 189 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms