RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 LY6G6FQ5SQ64 297 aa13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 FOXRED2Q8IWF2 684 aa13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 RASL11BQ9BPW5 248 aa13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 CHMP1AQ9HD42 196 aaPredicted RBP13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 Q9N2K0 584 aa13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 V9GY05 133 aa13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 IGHV7-81A0A0B4J1V7 117 aa13.08□□□□□ -0.32
PDLIM7-201ENST00000355572 G3V318 75 aa13.08□□□□□ -0.32
PDLIM7-201ENST00000355572 TRAM1Q15629 374 aa13.08□□□□□ -0.32
PDLIM7-201ENST00000355572 CD200R1LQ6Q8B3 271 aa13.08□□□□□ -0.32
PDLIM7-201ENST00000355572 FAM131AQ6UXB0 335 aa13.08□□□□□ -0.32
PDLIM7-201ENST00000355572 ZNF367Q7RTV3 350 aa13.08□□□□□ -0.32
PDLIM7-201ENST00000355572 C11orf54Q9H0W9 315 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-201ENST00000355572 KLK15Q9H2R5 256 aa13.08□□□□□ -0.32
PDLIM7-201ENST00000355572 RAB9BQ9NP90 201 aa13.08□□□□□ -0.32
PDLIM7-201ENST00000355572 SLC23A1Q9UHI7 598 aa13.08□□□□□ -0.32
PDLIM7-201ENST00000355572 NUDT19A8MXV4 375 aa13.07□□□□□ -0.32
PDLIM7-201ENST00000355572 ATP6V0E1O15342 81 aa13.07□□□□□ -0.32
PDLIM7-201ENST00000355572 ARL6IP5O75915 188 aa13.07□□□□□ -0.32
PDLIM7-201ENST00000355572 PPIFP30405 207 aaKnown RBP13.07□□□□□ -0.32
PDLIM7-201ENST00000355572 SOX6P35712 828 aa13.07□□□□□ -0.32
PDLIM7-201ENST00000355572 KIAA0141Q14154 515 aaPredicted RBP13.07□□□□□ -0.32
PDLIM7-201ENST00000355572 PNLIPRP3Q17RR3 467 aa13.07□□□□□ -0.32
PDLIM7-201ENST00000355572 RNF152Q8N8N0 203 aa13.07□□□□□ -0.32
PDLIM7-201ENST00000355572 OR2AK2Q8NG84 335 aa13.07□□□□□ -0.32
PDLIM7-201ENST00000355572 C5orf30Q96GV9 206 aa13.07□□□□□ -0.32
PDLIM7-201ENST00000355572 KCTD7Q96MP8 289 aa13.07□□□□□ -0.32
PDLIM7-201ENST00000355572 NDUFB11Q9NX14 153 aa13.07□□□□□ -0.32
PDLIM7-201ENST00000355572 ELF5Q9UKW6 265 aaPredicted RBP13.07□□□□□ -0.32
PDLIM7-201ENST00000355572 RNF150Q9ULK6 438 aa13.07□□□□□ -0.32
PDLIM7-201ENST00000355572 HSF4Q9ULV5 492 aa13.07□□□□□ -0.32
PDLIM7-201ENST00000355572 WSB1Q9Y6I7 421 aa13.07□□□□□ -0.32
PDLIM7-201ENST00000355572 NDUFA3O95167 84 aa13.06□□□□□ -0.32
PDLIM7-201ENST00000355572 PSMA1P25786 263 aaKnown RBP13.06□□□□□ -0.32
PDLIM7-201ENST00000355572 SLC35B1P78383 322 aa13.06□□□□□ -0.32
PDLIM7-201ENST00000355572 ZNF695Q8IW36 515 aa13.06□□□□□ -0.32
PDLIM7-201ENST00000355572 OR8H1Q8NGG4 311 aa13.06□□□□□ -0.32
PDLIM7-201ENST00000355572 MAFIPQ8WZ33 124 aa13.06□□□□□ -0.32
PDLIM7-201ENST00000355572 RCC1LQ96I51 464 aaKnown RBP13.06□□□□□ -0.32
PDLIM7-201ENST00000355572 URM1Q9BTM9 101 aaKnown RBP13.06□□□□□ -0.32
PDLIM7-201ENST00000355572 ZFP57Q9NU63 452 aa13.06□□□□□ -0.32
PDLIM7-201ENST00000355572 ABRACLQ9P1F3 81 aa13.06□□□□□ -0.32
PDLIM7-201ENST00000355572 STEAP1Q9UHE8 339 aa13.06□□□□□ -0.32
PDLIM7-201ENST00000355572 TRDV1A0A1B0GX56 115 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 H0YJW9 148 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 FCN1O00602 326 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 NBR2O15453 112 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 DENRO43583 198 aaKnown RBP13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 SOX15O60248 233 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 IGHG4P01861 327 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 IGF1P05019 195 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 PSMB8P28062 276 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 EGFEM1PQ0D2K5 195 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 C19orf54Q5BKX5 351 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 ASPHD1Q5U4P2 390 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 C22orf42Q6IC83 251 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 TEX38Q6PEX7 206 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 MOB1BQ7L9L4 216 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 REC114Q7Z4M0 266 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 SPARTQ8N0X7 666 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 DRAXINQ8NBI3 349 aaPredicted RBP13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 NPBQ8NG41 125 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 MYOZ3Q8TDC0 251 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 CMSS1Q9BQ75 279 aaKnown RBP13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 FBXL15Q9H469 300 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 GNB4Q9HAV0 340 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 BATF3Q9NR55 127 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 GAB2Q9UQC2 676 aa13.05□□□□□ -0.32
PDLIM7-201ENST00000355572 IGKV1D-8A0A087WSZ0 117 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 TRAV1-2A0A0B4J238 106 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 IFITM5A6NNB3 132 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 RAB27BO00194 218 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 MFNGO00587 321 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 RGS11O94810 467 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 HLA-DRB1P01911 266 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 EGR2P11161 476 aaPredicted RBP13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 CEACAM6P40199 344 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 MYCNOSP40205 109 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 FOXE3Q13461 319 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 C5orf64Q2M2E5 130 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 IGSF11Q5DX21 431 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 UBE2UQ5VVX9 321 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 COMMD1Q8N668 190 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 ZNF383Q8NA42 475 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 CASTOR1Q8WTX7 329 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 OR51J1Q9H342 316 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 C12orf4Q9NQ89 552 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 PARP11Q9NR21 331 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 TPSG1Q9NRR2 321 aa13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 ZNF230Q9UIE0 474 aaPredicted RBP13.04□□□□□ -0.32
PDLIM7-201ENST00000355572 CCL24O00175 119 aa13.03□□□□□ -0.32
PDLIM7-201ENST00000355572 GNB3P16520 340 aa13.03□□□□□ -0.32
PDLIM7-201ENST00000355572 GABARAPL2P60520 117 aa13.03□□□□□ -0.32
PDLIM7-201ENST00000355572 FAM71F2Q6NXP2 309 aa13.03□□□□□ -0.32
PDLIM7-201ENST00000355572 OR56B1Q8NGI3 324 aa13.03□□□□□ -0.32
PDLIM7-201ENST00000355572 RNF167Q9H6Y7 350 aa13.03□□□□□ -0.32
PDLIM7-201ENST00000355572 PIPOXQ9P0Z9 390 aa13.03□□□□□ -0.32
PDLIM7-201ENST00000355572 ZNF580Q9UK33 172 aa13.03□□□□□ -0.32
PDLIM7-201ENST00000355572 A0A075B6Q4 140 aa13.02□□□□□ -0.33
PDLIM7-201ENST00000355572 ITGB1BP1O14713 200 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms