RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 RPL23AP62750 156 aaKnown RBP16.98■□□□□ 0.31
CHRNA3-202ENST00000348639 DEFA5Q01523 94 aa16.98■□□□□ 0.31
CHRNA3-202ENST00000348639 CATR1Q13166 79 aa16.98■□□□□ 0.31
CHRNA3-202ENST00000348639 FGFRL1Q8N441 504 aa16.98■□□□□ 0.31
CHRNA3-202ENST00000348639 RFESDQ8TAC1 157 aa16.98■□□□□ 0.31
CHRNA3-202ENST00000348639 DCTN5Q9BTE1 182 aa16.98■□□□□ 0.31
CHRNA3-202ENST00000348639 ESRP2Q9H6T0 727 aaKnown RBP16.98■□□□□ 0.31
CHRNA3-202ENST00000348639 K7N7A8 449 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 CST7O76096 145 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 ATG12O94817 140 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 IGHV1-46P01743 117 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 DYNLT3P51808 116 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 ZNF295-AS1Q8N0V1 137 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 SPAG16Q8N0X2 631 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 ZNF808Q8N4W9 903 aaPredicted RBP16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 TREM1Q9NP99 234 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 CACFD1Q9UGQ2 172 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 WSB1Q9Y6I7 421 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 ICE1Q9Y2F5 2266 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 PCNX1Q96RV3 2341 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 RPL30P62888 115 aaKnown RBP16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 TNFAIP6P98066 277 aaPredicted RBP16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 C10orf91Q5T1B1 145 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 ATRAIDQ6UW56 229 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 FAM222BQ8WU58 562 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 GCM1Q9NP62 436 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 STRAPQ9Y3F4 350 aaKnown RBP16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 MMP24Q9Y5R2 645 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 CACNA1DQ01668 2161 aa16.97■□□□□ 0.31
CHRNA3-202ENST00000348639 IGHV3-43A0A0B4J1X8 118 aa16.96■□□□□ 0.31
CHRNA3-202ENST00000348639 SYNGR2O43760 224 aa16.96■□□□□ 0.31
CHRNA3-202ENST00000348639 IGHV3-43DP0DP04 118 aa16.96■□□□□ 0.31
CHRNA3-202ENST00000348639 ADCYAP1P18509 176 aa16.96■□□□□ 0.31
CHRNA3-202ENST00000348639 ID4P47928 161 aa16.96■□□□□ 0.31
CHRNA3-202ENST00000348639 RBPJQ06330 500 aa16.96■□□□□ 0.31
CHRNA3-202ENST00000348639 SSX8Q7RTT4 187 aa16.96■□□□□ 0.31
CHRNA3-202ENST00000348639 TCTEX1D1Q8N7M0 179 aa16.96■□□□□ 0.31
CHRNA3-202ENST00000348639 ZNRF1Q8ND25 227 aa16.96■□□□□ 0.31
CHRNA3-202ENST00000348639 UQCC1Q9NVA1 299 aa16.96■□□□□ 0.31
CHRNA3-202ENST00000348639 COA4Q9NYJ1 87 aa16.96■□□□□ 0.31
CHRNA3-202ENST00000348639 RNF7Q9UBF6 113 aa16.96■□□□□ 0.31
CHRNA3-202ENST00000348639 IGF2RP11717 2491 aa16.96■□□□□ 0.31
CHRNA3-202ENST00000348639 TLN1Q9Y490 2541 aaKnown RBP16.96■□□□□ 0.31
CHRNA3-202ENST00000348639 TXNL1O43396 289 aa16.96■□□□□ 0.3
CHRNA3-202ENST00000348639 RAMP3O60896 148 aa16.96■□□□□ 0.3
CHRNA3-202ENST00000348639 MUC1P15941 1255 aaPredicted RBP16.96■□□□□ 0.3
CHRNA3-202ENST00000348639 TNFSF4P23510 183 aa16.96■□□□□ 0.3
CHRNA3-202ENST00000348639 ARHGDIBP52566 201 aa16.96■□□□□ 0.3
CHRNA3-202ENST00000348639 STX12Q86Y82 276 aa16.96■□□□□ 0.3
CHRNA3-202ENST00000348639 TMEM217Q8N7C4 229 aa16.96■□□□□ 0.3
CHRNA3-202ENST00000348639 TSNAXQ99598 290 aaKnown RBP16.96■□□□□ 0.3
CHRNA3-202ENST00000348639 AGMATQ9BSE5 352 aa16.96■□□□□ 0.3
CHRNA3-202ENST00000348639 TMEM231Q9H6L2 316 aa16.96■□□□□ 0.3
CHRNA3-202ENST00000348639 CAMLGP49069 296 aa16.95■□□□□ 0.3
CHRNA3-202ENST00000348639 ZNF66Q6ZN08 573 aa16.95■□□□□ 0.3
CHRNA3-202ENST00000348639 FAM216AQ8WUB2 273 aa16.95■□□□□ 0.3
CHRNA3-202ENST00000348639 NCOR1P1Q9H4R4 102 aa16.95■□□□□ 0.3
CHRNA3-202ENST00000348639 JPT1Q9UK76 154 aa16.95■□□□□ 0.3
CHRNA3-202ENST00000348639 CARHSP1Q9Y2V2 147 aaKnown RBP16.95■□□□□ 0.3
CHRNA3-202ENST00000348639 ADGRG4Q8IZF6 3080 aa16.95■□□□□ 0.3
CHRNA3-202ENST00000348639 DEFB108AA8MXU0 73 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 FAM90A26D6RGX4 464 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 TRIM77I1YAP6 450 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 TOR1AO14656 332 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 CLDN1O95832 211 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 ATP6V0CP27449 155 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 SULT1A1P50225 295 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 UCNP55089 124 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 Q8TCH9 128 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 TCTEX1D2Q8WW35 142 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 EDARADDQ8WWZ3 215 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 PSG11Q9UQ72 335 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 FAM96BQ9Y3D0 163 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 PLCE1Q9P212 2302 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 DPRXA6NFQ7 191 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 F8W036 122 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 RNASEK-C17orf49H0YIS7 233 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 TSPAN15O95858 294 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 PRH1P02810 166 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 CD5P06127 495 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 THBDP07204 575 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 CD80P33681 288 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 BRWD1-AS2P59051 145 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 BTNL3Q6UXE8 466 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 SVBPQ8N300 66 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 ZNF561Q8N587 486 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 COMMD1Q8N668 190 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 HSD17B10Q99714 261 aaKnown RBP16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 ATP5SQ99766 215 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 C19orf12Q9NSK7 152 aa16.94■□□□□ 0.3
CHRNA3-202ENST00000348639 SMG1Q96Q15 3661 aaKnown RBP16.93■□□□□ 0.3
CHRNA3-202ENST00000348639 AGPAT2O15120 278 aa16.93■□□□□ 0.3
CHRNA3-202ENST00000348639 ST8SIA5O15466 376 aa16.93■□□□□ 0.3
CHRNA3-202ENST00000348639 P0C879 139 aa16.93■□□□□ 0.3
CHRNA3-202ENST00000348639 FHITP49789 147 aa16.93■□□□□ 0.3
CHRNA3-202ENST00000348639 TAS2R30P59541 319 aa16.93■□□□□ 0.3
CHRNA3-202ENST00000348639 ZNF616Q08AN1 781 aa16.93■□□□□ 0.3
CHRNA3-202ENST00000348639 MIDNQ504T8 468 aa16.93■□□□□ 0.3
CHRNA3-202ENST00000348639 FAM201AQ5SY85 155 aa16.93■□□□□ 0.3
CHRNA3-202ENST00000348639 TMEM182Q6ZP80 229 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms