RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 OR2F2O95006 317 aa12.35□□□□□ -0.43
TNFRSF12A-202ENST00000341627 SNRNP70P08621 437 aaKnown RBP12.35□□□□□ -0.43
TNFRSF12A-202ENST00000341627 CTXN2P0C2S0 81 aa12.35□□□□□ -0.43
TNFRSF12A-202ENST00000341627 HERPUD1Q15011 391 aa12.35□□□□□ -0.43
TNFRSF12A-202ENST00000341627 OR2T6Q8NHC8 308 aa12.35□□□□□ -0.43
TNFRSF12A-202ENST00000341627 LINC01006Q8NI28 216 aa12.35□□□□□ -0.43
TNFRSF12A-202ENST00000341627 RBM14Q96PK6 669 aaKnown RBP12.35□□□□□ -0.43
TNFRSF12A-202ENST00000341627 S1PR3Q99500 378 aa12.35□□□□□ -0.43
TNFRSF12A-202ENST00000341627 GINS4Q9BRT9 223 aa12.35□□□□□ -0.43
TNFRSF12A-202ENST00000341627 SLC25A33Q9BSK2 321 aa12.35□□□□□ -0.43
TNFRSF12A-202ENST00000341627 C11orf54Q9H0W9 315 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF12A-202ENST00000341627 IFI27L2Q9H2X8 130 aa12.35□□□□□ -0.43
TNFRSF12A-202ENST00000341627 RDH8Q9NYR8 311 aa12.35□□□□□ -0.43
TNFRSF12A-202ENST00000341627 RNF114Q9Y508 228 aa12.35□□□□□ -0.43
TNFRSF12A-202ENST00000341627 MGAM2Q2M2H8 2515 aa12.35□□□□□ -0.43
TNFRSF12A-202ENST00000341627 TRBV6-7A0A0A0MS04 114 aa12.34□□□□□ -0.43
TNFRSF12A-202ENST00000341627 M0QZK8 103 aa12.34□□□□□ -0.43
TNFRSF12A-202ENST00000341627 SSX5O60225 188 aa12.34□□□□□ -0.43
TNFRSF12A-202ENST00000341627 IGKV1D-33P01593 117 aa12.34□□□□□ -0.43
TNFRSF12A-202ENST00000341627 IGKV1-33P01594 117 aa12.34□□□□□ -0.43
TNFRSF12A-202ENST00000341627 TMEM11P17152 192 aa12.34□□□□□ -0.43
TNFRSF12A-202ENST00000341627 CD1BP29016 333 aa12.34□□□□□ -0.43
TNFRSF12A-202ENST00000341627 SPCS2Q15005 226 aa12.34□□□□□ -0.43
TNFRSF12A-202ENST00000341627 IGSF11Q5DX21 431 aa12.34□□□□□ -0.43
TNFRSF12A-202ENST00000341627 FAM71F2Q6NXP2 309 aa12.34□□□□□ -0.43
TNFRSF12A-202ENST00000341627 C11orf88Q6PI97 169 aa12.34□□□□□ -0.43
TNFRSF12A-202ENST00000341627 ZNF833PQ6ZTB9 187 aa12.34□□□□□ -0.43
TNFRSF12A-202ENST00000341627 ODF3L1Q8IXM7 274 aa12.34□□□□□ -0.43
TNFRSF12A-202ENST00000341627 PRSS22Q9GZN4 317 aa12.34□□□□□ -0.43
TNFRSF12A-202ENST00000341627 TOLLIPQ9H0E2 274 aa12.34□□□□□ -0.43
TNFRSF12A-202ENST00000341627 IGKV1D-8A0A087WSZ0 117 aa12.33□□□□□ -0.44
TNFRSF12A-202ENST00000341627 SAA2-SAA4A0A096LPE2 208 aa12.33□□□□□ -0.44
TNFRSF12A-202ENST00000341627 IGHV3-72A0A0B4J1Y9 119 aa12.33□□□□□ -0.44
TNFRSF12A-202ENST00000341627 EIF4EP06730 217 aaKnown RBP12.33□□□□□ -0.44
TNFRSF12A-202ENST00000341627 SAA2P0DJI9 122 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF12A-202ENST00000341627 CBX5P45973 191 aa12.33□□□□□ -0.44
TNFRSF12A-202ENST00000341627 OR3A3P47888 321 aa12.33□□□□□ -0.44
TNFRSF12A-202ENST00000341627 TAS2R20P59543 309 aa12.33□□□□□ -0.44
TNFRSF12A-202ENST00000341627 CNIH2Q6PI25 160 aa12.33□□□□□ -0.44
TNFRSF12A-202ENST00000341627 SHISA2Q6UWI4 295 aa12.33□□□□□ -0.44
TNFRSF12A-202ENST00000341627 OR2T10Q8NGZ9 312 aa12.33□□□□□ -0.44
TNFRSF12A-202ENST00000341627 ISOC1Q96CN7 298 aa12.33□□□□□ -0.44
TNFRSF12A-202ENST00000341627 PARP12Q9H0J9 701 aaKnown RBP12.33□□□□□ -0.44
TNFRSF12A-202ENST00000341627 ANXA10Q9UJ72 324 aa12.33□□□□□ -0.44
TNFRSF12A-202ENST00000341627 ZNF221Q9UK13 617 aa12.33□□□□□ -0.44
TNFRSF12A-202ENST00000341627 MOB4Q9Y3A3 225 aa12.33□□□□□ -0.44
TNFRSF12A-202ENST00000341627 FAM25AB3EWG3 89 aa12.32□□□□□ -0.44
TNFRSF12A-202ENST00000341627 FAM25CB3EWG5 89 aa12.32□□□□□ -0.44
TNFRSF12A-202ENST00000341627 FAM25GB3EWG6 89 aa12.32□□□□□ -0.44
TNFRSF12A-202ENST00000341627 HPGDSO60760 199 aa12.32□□□□□ -0.44
TNFRSF12A-202ENST00000341627 GPR12P47775 334 aa12.32□□□□□ -0.44
TNFRSF12A-202ENST00000341627 LSAMPQ13449 338 aa12.32□□□□□ -0.44
TNFRSF12A-202ENST00000341627 EBI3Q14213 229 aa12.32□□□□□ -0.44
TNFRSF12A-202ENST00000341627 HNF4GQ14541 408 aa12.32□□□□□ -0.44
TNFRSF12A-202ENST00000341627 ARSJQ5FYB0 599 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF12A-202ENST00000341627 HOGA1Q86XE5 327 aa12.32□□□□□ -0.44
TNFRSF12A-202ENST00000341627 ABHD14BQ96IU4 210 aa12.32□□□□□ -0.44
TNFRSF12A-202ENST00000341627 AGMATQ9BSE5 352 aa12.32□□□□□ -0.44
TNFRSF12A-202ENST00000341627 RBM7Q9Y580 266 aaKnown RBP12.32□□□□□ -0.44
TNFRSF12A-202ENST00000341627 CCDC160A6NGH7 325 aa12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 H3BMQ9 156 aa12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 MOSP00540 346 aa12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 PTHLHP12272 177 aa12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 ELK1P19419 428 aa12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 PRSS3P35030 304 aa12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 ARPC4P59998 168 aa12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 H1FOOQ8IZA3 346 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 Q8N2B8 174 aa12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 BEST4Q8NFU0 473 aa12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 SGMS2Q8NHU3 365 aa12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 EAF1Q96JC9 268 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 NABP2Q9BQ15 211 aa12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 MRPL20Q9BYC9 149 aaKnown RBP12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 ZNF702PQ9H963 129 aa12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 IFT46Q9NQC8 304 aa12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 CCDC59Q9P031 241 aaKnown RBP12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 RNF150Q9ULK6 438 aa12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 MRPS7Q9Y2R9 242 aaKnown RBP12.31□□□□□ -0.44
TNFRSF12A-202ENST00000341627 PKD1L1Q8TDX9 2849 aa12.3□□□□□ -0.44
TNFRSF12A-202ENST00000341627 ZNF736B4DX44 427 aaPredicted RBP12.3□□□□□ -0.44
TNFRSF12A-202ENST00000341627 FGF16O43320 207 aa12.3□□□□□ -0.44
TNFRSF12A-202ENST00000341627 OR8U9P0C7N5 309 aa12.3□□□□□ -0.44
TNFRSF12A-202ENST00000341627 PROK1P58294 105 aa12.3□□□□□ -0.44
TNFRSF12A-202ENST00000341627 BLCAPP62952 87 aa12.3□□□□□ -0.44
TNFRSF12A-202ENST00000341627 FBLN7Q53RD9 439 aa12.3□□□□□ -0.44
TNFRSF12A-202ENST00000341627 RPL39P5Q59GN2 51 aa12.3□□□□□ -0.44
TNFRSF12A-202ENST00000341627 GVQW1Q8N7I0 195 aa12.3□□□□□ -0.44
TNFRSF12A-202ENST00000341627 OR8H1Q8NGG4 311 aa12.3□□□□□ -0.44
TNFRSF12A-202ENST00000341627 OR8U1Q8NH10 309 aa12.3□□□□□ -0.44
TNFRSF12A-202ENST00000341627 DYNC2LI1Q8TCX1 351 aa12.3□□□□□ -0.44
TNFRSF12A-202ENST00000341627 WFDC12Q8WWY7 111 aa12.3□□□□□ -0.44
TNFRSF12A-202ENST00000341627 ZNF251Q9BRH9 671 aa12.3□□□□□ -0.44
TNFRSF12A-202ENST00000341627 ADAM30Q9UKF2 790 aa12.3□□□□□ -0.44
TNFRSF12A-202ENST00000341627 CEPT1Q9Y6K0 416 aa12.3□□□□□ -0.44
TNFRSF12A-202ENST00000341627 NCBP2LA6PVI3 153 aaKnown RBP12.29□□□□□ -0.44
TNFRSF12A-202ENST00000341627 RGS5O15539 181 aa12.29□□□□□ -0.44
TNFRSF12A-202ENST00000341627 PEX14O75381 377 aa12.29□□□□□ -0.44
TNFRSF12A-202ENST00000341627 HLA-DQB1P01920 261 aa12.29□□□□□ -0.44
TNFRSF12A-202ENST00000341627 MC5RP33032 325 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms