RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 ZNF773Q6PK81 442 aa15.16■□□□□ 0.02
ITGA4-202ENST00000339307 ZNF833PQ6ZTB9 187 aa15.16■□□□□ 0.02
ITGA4-202ENST00000339307 ZNF367Q7RTV3 350 aa15.16■□□□□ 0.02
ITGA4-202ENST00000339307 KCNG3Q8TAE7 436 aa15.16■□□□□ 0.02
ITGA4-202ENST00000339307 CHCHD6Q9BRQ6 235 aa15.16■□□□□ 0.02
ITGA4-202ENST00000339307 NICN1Q9BSH3 213 aa15.16■□□□□ 0.02
ITGA4-202ENST00000339307 ACOT13Q9NPJ3 140 aa15.16■□□□□ 0.02
ITGA4-202ENST00000339307 PLEKHJ1Q9NW61 149 aa15.16■□□□□ 0.02
ITGA4-202ENST00000339307 VSIG4Q9Y279 399 aa15.16■□□□□ 0.02
ITGA4-202ENST00000339307 A3GALT2U3KPV4 340 aa15.16■□□□□ 0.02
ITGA4-202ENST00000339307 IGHV7-81A0A0B4J1V7 117 aa15.15■□□□□ 0.02
ITGA4-202ENST00000339307 HLA-DRB1P01911 266 aa15.15■□□□□ 0.02
ITGA4-202ENST00000339307 SRMP19623 302 aa15.15■□□□□ 0.02
ITGA4-202ENST00000339307 MLLT11Q13015 90 aaPredicted RBP15.15■□□□□ 0.02
ITGA4-202ENST00000339307 HMGN3Q15651 99 aa15.15■□□□□ 0.02
ITGA4-202ENST00000339307 C5orf64Q2M2E5 130 aa15.15■□□□□ 0.02
ITGA4-202ENST00000339307 FAM131AQ6UXB0 335 aa15.15■□□□□ 0.02
ITGA4-202ENST00000339307 LRRTM1Q86UE6 522 aa15.15■□□□□ 0.02
ITGA4-202ENST00000339307 SPARTQ8N0X7 666 aa15.15■□□□□ 0.02
ITGA4-202ENST00000339307 UBE2E2Q96LR5 201 aa15.15■□□□□ 0.02
ITGA4-202ENST00000339307 H7C2Y5 167 aa15.14■□□□□ 0.01
ITGA4-202ENST00000339307 GSTP1P09211 210 aaKnown RBP15.14■□□□□ 0.01
ITGA4-202ENST00000339307 OR8U8P0C7N1 319 aa15.14■□□□□ 0.01
ITGA4-202ENST00000339307 PPIFP30405 207 aaKnown RBP15.14■□□□□ 0.01
ITGA4-202ENST00000339307 ZNF616Q08AN1 781 aa15.14■□□□□ 0.01
ITGA4-202ENST00000339307 TPBGQ13641 420 aa15.14■□□□□ 0.01
ITGA4-202ENST00000339307 RPL39P5Q59GN2 51 aa15.14■□□□□ 0.01
ITGA4-202ENST00000339307 GLDNQ6ZMI3 551 aaPredicted RBP15.14■□□□□ 0.01
ITGA4-202ENST00000339307 ZNF491Q8N8L2 437 aa15.14■□□□□ 0.01
ITGA4-202ENST00000339307 TMEM203Q969S6 136 aa15.14■□□□□ 0.01
ITGA4-202ENST00000339307 MGLLQ99685 303 aa15.14■□□□□ 0.01
ITGA4-202ENST00000339307 ASCL2Q99929 193 aa15.14■□□□□ 0.01
ITGA4-202ENST00000339307 IFI27L2Q9H2X8 130 aa15.14■□□□□ 0.01
ITGA4-202ENST00000339307 PIPOXQ9P0Z9 390 aa15.14■□□□□ 0.01
ITGA4-202ENST00000339307 SCOCQ9UIL1 159 aa15.14■□□□□ 0.01
ITGA4-202ENST00000339307 RAB29O14966 203 aa15.13■□□□□ 0.01
ITGA4-202ENST00000339307 HSPA12AO43301 675 aa15.13■□□□□ 0.01
ITGA4-202ENST00000339307 NHLRC4P0CG21 123 aaPredicted RBP15.13■□□□□ 0.01
ITGA4-202ENST00000339307 RAB9AP51151 201 aa15.13■□□□□ 0.01
ITGA4-202ENST00000339307 TRAM1Q15629 374 aa15.13■□□□□ 0.01
ITGA4-202ENST00000339307 C1orf100Q5SVJ3 147 aa15.13■□□□□ 0.01
ITGA4-202ENST00000339307 UBE2UQ5VVX9 321 aa15.13■□□□□ 0.01
ITGA4-202ENST00000339307 PHYHIPQ92561 330 aa15.13■□□□□ 0.01
ITGA4-202ENST00000339307 UFD1Q92890 307 aa15.13■□□□□ 0.01
ITGA4-202ENST00000339307 FBXL15Q9H469 300 aa15.13■□□□□ 0.01
ITGA4-202ENST00000339307 PLGRKTQ9HBL7 147 aa15.13■□□□□ 0.01
ITGA4-202ENST00000339307 SLC23A1Q9UHI7 598 aa15.13■□□□□ 0.01
ITGA4-202ENST00000339307 ZNF580Q9UK33 172 aa15.13■□□□□ 0.01
ITGA4-202ENST00000339307 A0A1W2PN81 502 aa15.12■□□□□ 0.01
ITGA4-202ENST00000339307 HSMCR30P0CW71 290 aa15.12■□□□□ 0.01
ITGA4-202ENST00000339307 CPEP16870 476 aa15.12■□□□□ 0.01
ITGA4-202ENST00000339307 PSMA1P25786 263 aaKnown RBP15.12■□□□□ 0.01
ITGA4-202ENST00000339307 CHRNA7P36544 502 aa15.12■□□□□ 0.01
ITGA4-202ENST00000339307 MAP2K4P45985 399 aa15.12■□□□□ 0.01
ITGA4-202ENST00000339307 GNB1P62873 340 aa15.12■□□□□ 0.01
ITGA4-202ENST00000339307 UNC119Q13432 240 aa15.12■□□□□ 0.01
ITGA4-202ENST00000339307 FHL3Q13643 280 aa15.12■□□□□ 0.01
ITGA4-202ENST00000339307 P2RY14Q15391 338 aa15.12■□□□□ 0.01
ITGA4-202ENST00000339307 LY6G6FQ5SQ64 297 aa15.12■□□□□ 0.01
ITGA4-202ENST00000339307 NPBQ8NG41 125 aa15.12■□□□□ 0.01
ITGA4-202ENST00000339307 CASTOR1Q8WTX7 329 aa15.12■□□□□ 0.01
ITGA4-202ENST00000339307 ABHD14BQ96IU4 210 aa15.12■□□□□ 0.01
ITGA4-202ENST00000339307 CLCC1Q96S66 551 aa15.12■□□□□ 0.01
ITGA4-202ENST00000339307 ZNF256Q9Y2P7 627 aaPredicted RBP15.12■□□□□ 0.01
ITGA4-202ENST00000339307 LSM4Q9Y4Z0 139 aaKnown RBP15.12■□□□□ 0.01
ITGA4-202ENST00000339307 U3KQK5 164 aa15.12■□□□□ 0.01
ITGA4-202ENST00000339307 COL7A1Q02388 2944 aa15.11■□□□□ 0.01
ITGA4-202ENST00000339307 A0A087WXM4 84 aa15.11■□□□□ 0.01
ITGA4-202ENST00000339307 I3L521 148 aa15.11■□□□□ 0.01
ITGA4-202ENST00000339307 CEACAM6P40199 344 aa15.11■□□□□ 0.01
ITGA4-202ENST00000339307 LIPKQ5VXJ0 399 aa15.11■□□□□ 0.01
ITGA4-202ENST00000339307 URM1Q9BTM9 101 aaKnown RBP15.11■□□□□ 0.01
ITGA4-202ENST00000339307 TM2D1Q9BX74 207 aa15.11■□□□□ 0.01
ITGA4-202ENST00000339307 ALX4Q9H161 411 aaPredicted RBP15.11■□□□□ 0.01
ITGA4-202ENST00000339307 BPNT1O95861 308 aa15.1■□□□□ 0.01
ITGA4-202ENST00000339307 IGLV1-40P01703 118 aa15.1■□□□□ 0.01
ITGA4-202ENST00000339307 CT45A6P0DMU7 189 aa15.1■□□□□ 0.01
ITGA4-202ENST00000339307 CT45A5P0DMU8 189 aa15.1■□□□□ 0.01
ITGA4-202ENST00000339307 CT45A7P0DMV0 189 aa15.1■□□□□ 0.01
ITGA4-202ENST00000339307 ARSBP15848 533 aa15.1■□□□□ 0.01
ITGA4-202ENST00000339307 KIAA0141Q14154 515 aaPredicted RBP15.1■□□□□ 0.01
ITGA4-202ENST00000339307 MOB1BQ7L9L4 216 aa15.1■□□□□ 0.01
ITGA4-202ENST00000339307 TSPAN14Q8NG11 270 aa15.1■□□□□ 0.01
ITGA4-202ENST00000339307 OR6M1Q8NGM8 313 aa15.1■□□□□ 0.01
ITGA4-202ENST00000339307 MYOZ3Q8TDC0 251 aa15.1■□□□□ 0.01
ITGA4-202ENST00000339307 DCUN1D4Q92564 292 aa15.1■□□□□ 0.01
ITGA4-202ENST00000339307 HDHD3Q9BSH5 251 aaPredicted RBP15.1■□□□□ 0.01
ITGA4-202ENST00000339307 PARP12Q9H0J9 701 aaKnown RBP15.1■□□□□ 0.01
ITGA4-202ENST00000339307 VCX3AQ9NNX9 186 aa15.1■□□□□ 0.01
ITGA4-202ENST00000339307 AK3Q9UIJ7 227 aa15.1■□□□□ 0.01
ITGA4-202ENST00000339307 RNF150Q9ULK6 438 aa15.1■□□□□ 0.01
ITGA4-202ENST00000339307 TMEM14DPA8MWL7 114 aa15.09■□□□□ 0.01
ITGA4-202ENST00000339307 RRHO14718 337 aa15.09■□□□□ 0.01
ITGA4-202ENST00000339307 OVOL1O14753 267 aa15.09■□□□□ 0.01
ITGA4-202ENST00000339307 SLC22A1O15245 554 aa15.09■□□□□ 0.01
ITGA4-202ENST00000339307 SOCS1O15524 211 aa15.09■□□□□ 0.01
ITGA4-202ENST00000339307 NDUFA3O95167 84 aa15.09■□□□□ 0.01
ITGA4-202ENST00000339307 NAPSAO96009 420 aa15.09■□□□□ 0.01
ITGA4-202ENST00000339307 MC5RP33032 325 aa15.09■□□□□ 0.01
ITGA4-202ENST00000339307 CX3CL1P78423 397 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms