RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 OR2A7Q96R45 310 aa12.08□□□□□ -0.47
CBX3-201ENST00000337620 BPESC1Q9GZL8 116 aa12.08□□□□□ -0.47
CBX3-201ENST00000337620 SPG11Q96JI7 2443 aa12.08□□□□□ -0.48
CBX3-201ENST00000337620 PPIAL4CA0A0B4J2A2 164 aa12.08□□□□□ -0.48
CBX3-201ENST00000337620 PPIAL4GP0DN37 164 aa12.08□□□□□ -0.48
CBX3-201ENST00000337620 HLA-GP17693 338 aa12.08□□□□□ -0.48
CBX3-201ENST00000337620 GPR12P47775 334 aa12.08□□□□□ -0.48
CBX3-201ENST00000337620 TMEM30BQ3MIR4 351 aa12.08□□□□□ -0.48
CBX3-201ENST00000337620 CT45A1Q5HYN5 189 aa12.08□□□□□ -0.48
CBX3-201ENST00000337620 BTNL3Q6UXE8 466 aa12.08□□□□□ -0.48
CBX3-201ENST00000337620 ZBTB34Q8NCN2 500 aa12.08□□□□□ -0.48
CBX3-201ENST00000337620 OR10A7Q8NGE5 316 aa12.08□□□□□ -0.48
CBX3-201ENST00000337620 CT45A3Q8NHU0 189 aa12.08□□□□□ -0.48
CBX3-201ENST00000337620 MSI2Q96DH6 328 aaKnown RBP12.08□□□□□ -0.48
CBX3-201ENST00000337620 ABHD14AQ9BUJ0 271 aa12.08□□□□□ -0.48
CBX3-201ENST00000337620 SSBP3Q9BWW4 388 aaPredicted RBP12.08□□□□□ -0.48
CBX3-201ENST00000337620 TMEM222Q9H0R3 208 aa12.08□□□□□ -0.48
CBX3-201ENST00000337620 RAB18Q9NP72 206 aa12.08□□□□□ -0.48
CBX3-201ENST00000337620 RAP2BP61225 183 aa12.07□□□□□ -0.48
CBX3-201ENST00000337620 Q3ZCU0 254 aa12.07□□□□□ -0.48
CBX3-201ENST00000337620 ESCO2Q56NI9 601 aa12.07□□□□□ -0.48
CBX3-201ENST00000337620 GSG1LQ6UXU4 331 aa12.07□□□□□ -0.48
CBX3-201ENST00000337620 LGI3Q8N145 548 aa12.07□□□□□ -0.48
CBX3-201ENST00000337620 PERPQ96FX8 193 aa12.07□□□□□ -0.48
CBX3-201ENST00000337620 C5orf30Q96GV9 206 aa12.07□□□□□ -0.48
CBX3-201ENST00000337620 SDHAF2Q9NX18 166 aa12.07□□□□□ -0.48
CBX3-201ENST00000337620 F5H0A9 414 aaPredicted RBP12.07□□□□□ -0.48
CBX3-201ENST00000337620 H0Y980 276 aa12.07□□□□□ -0.48
CBX3-201ENST00000337620 C1QBP02746 253 aa12.07□□□□□ -0.48
CBX3-201ENST00000337620 RAB7AP51149 207 aa12.07□□□□□ -0.48
CBX3-201ENST00000337620 DLX6P56179 175 aa12.07□□□□□ -0.48
CBX3-201ENST00000337620 NOXA1Q86UR1 476 aa12.07□□□□□ -0.48
CBX3-201ENST00000337620 LHFPL5Q8TAF8 219 aa12.07□□□□□ -0.48
CBX3-201ENST00000337620 FBN2P35556 2912 aa12.06□□□□□ -0.48
CBX3-201ENST00000337620 A0A1W2PPH5 198 aa12.06□□□□□ -0.48
CBX3-201ENST00000337620 MPTX1A8MV57 137 aa12.06□□□□□ -0.48
CBX3-201ENST00000337620 Q5BKY6 102 aa12.06□□□□□ -0.48
CBX3-201ENST00000337620 TMEM268Q5VZI3 342 aa12.06□□□□□ -0.48
CBX3-201ENST00000337620 LYZL2Q7Z4W2 148 aa12.06□□□□□ -0.48
CBX3-201ENST00000337620 ZNF695Q8IW36 515 aa12.06□□□□□ -0.48
CBX3-201ENST00000337620 FAM168AQ92567 244 aa12.06□□□□□ -0.48
CBX3-201ENST00000337620 RAB39BQ96DA2 213 aa12.06□□□□□ -0.48
CBX3-201ENST00000337620 IFI27L2Q9H2X8 130 aa12.06□□□□□ -0.48
CBX3-201ENST00000337620 BARX1Q9HBU1 254 aaPredicted RBP12.06□□□□□ -0.48
CBX3-201ENST00000337620 VPS13CQ709C8 3753 aa12.06□□□□□ -0.48
CBX3-201ENST00000337620 HELZ2Q9BYK8 2649 aaKnown RBP12.06□□□□□ -0.48
CBX3-201ENST00000337620 ARID1AO14497 2285 aa12.06□□□□□ -0.48
CBX3-201ENST00000337620 LOC105371242A0A075B767 164 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 RNF212BA8MTL3 300 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 C22orf46C9J442 243 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 ITGB1BP1O14713 200 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 IFNA21P01568 189 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 SERPINE2P07093 398 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 DNASE1P24855 282 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 LYG1Q8N1E2 194 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 LRTM2Q8N967 370 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 ZNF439Q8NDP4 499 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 C8orf46Q8TAG6 207 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 FAM216AQ8WUB2 273 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 RANBP3Q9H6Z4 567 aaPredicted RBP12.05□□□□□ -0.48
CBX3-201ENST00000337620 IGHV2-5P01817 119 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 LIPFP07098 398 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 IGHV1-8P0DP01 117 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 UCP1P25874 307 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 KRTAP10-9P60411 292 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 SRPXP78539 464 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 MSMO1Q15800 293 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 RPL39P5Q59GN2 51 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 GGNBP1Q5YKI7 109 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 C11orf42Q8N5U0 333 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 TCTEX1D2Q8WW35 142 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 C18orf12Q96KH6 178 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 OR10C1Q96KK4 312 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 PIMREGQ9BSJ6 248 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 LIN7CQ9NUP9 197 aaKnown RBP12.05□□□□□ -0.48
CBX3-201ENST00000337620 ZNRD1Q9P1U0 126 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 ONECUT1Q9UBC0 465 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 DOPEY2Q9Y3R5 2298 aa12.05□□□□□ -0.48
CBX3-201ENST00000337620 C17orf98A8MV24 154 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 CDS2O95674 445 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 GZMKP49863 264 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 LINC00205P59089 165 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 RPL30P62888 115 aaKnown RBP12.04□□□□□ -0.48
CBX3-201ENST00000337620 OR2B11Q5JQS5 317 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 CLEC2AQ6UVW9 174 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 SLC25A48Q6ZT89 311 aaKnown RBP12.04□□□□□ -0.48
CBX3-201ENST00000337620 SELENOHQ8IZQ5 122 aaKnown RBP12.04□□□□□ -0.48
CBX3-201ENST00000337620 SLC35G3Q8N808 338 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 CLDND2Q8NHS1 167 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 ASB13Q8WXK3 278 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 TMEM56Q96MV1 263 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 PSMG3-AS1Q96PY0 264 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 TMEM56-RWDD3S4R434 201 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 M0R1X1 148 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 RAB29O14966 203 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 PROP1O75360 226 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 B3GALNT1O75752 331 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 SSTR2P30874 369 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 CATR1Q13166 79 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 EIF4EBP1Q13541 118 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms