RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 TAAR3PQ9P1P4 343 aa7.03□□□□□ -1.28
HPS4-201ENST00000336873 COL12A1Q99715 3063 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 LRP5LA4QPB2 252 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 CXorf65A6NEN9 183 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 ZNF716A6NP11 495 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 C9orf172C9J069 976 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 SLC25A6P12236 298 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 RAB4AP20338 218 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 GPR12P47775 334 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 GLIPR1P48060 266 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 SRPXP78539 464 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 H3F3AP84243 136 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 SLC38A11Q08AI6 406 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 CATR1Q13166 79 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 ZNRF1Q8ND25 227 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 SF3B5Q9BWJ5 86 aaKnown RBP7.02□□□□□ -1.29
HPS4-201ENST00000336873 RPRMQ9NS64 109 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 OR2W1Q9Y3N9 320 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 LRRC3CA6NJW4 275 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 DBX1A6NMT0 343 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 H7BYZ3 331 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 WISP2O76076 250 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 IFNA1P01562 189 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 TAS2R60P59551 318 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 WFDC8Q8IUA0 241 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 LYG1Q8N1E2 194 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 LRRC29Q8WV35 223 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 HIST1H2BAQ96A08 127 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 MOB3AQ96BX8 217 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 MUCL1Q96DR8 90 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 VPS25Q9BRG1 176 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 GPR61Q9BZJ8 451 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 PROK2Q9HC23 129 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 SONP18583 2426 aaKnown RBP7.02□□□□□ -1.29
HPS4-201ENST00000336873 TANC2Q9HCD6 1990 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 CCDC168Q8NDH2 2452 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 IGHV3-21A0A0B4J1V1 117 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 LY6G6EA0A0G2JKS1 128 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 SPINT2O43291 252 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 SP1P08047 785 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 FAM157CP0CG43 387 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 MGST1P10620 155 aaKnown RBP7.02□□□□□ -1.29
HPS4-201ENST00000336873 SNCAP37840 140 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 FAM3BP58499 235 aaPredicted RBP7.02□□□□□ -1.29
HPS4-201ENST00000336873 IL13RA2Q14627 380 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 MSMO1Q15800 293 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 CEACAM21Q3KPI0 293 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 FFAR4Q5NUL3 377 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 ACSM6Q6P461 480 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 GGNQ86UU5 652 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 DOK5Q9P104 306 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 U3KQA8 63 aa7.02□□□□□ -1.29
HPS4-201ENST00000336873 ZFYVE26Q68DK2 2539 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 ZNF737O75373 536 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 DFFBO76075 338 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 SCGB1D1O95968 90 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 MT-ND4LP03901 98 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 CCL8P80075 99 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 EIF3IQ13347 325 aaKnown RBP7.01□□□□□ -1.29
HPS4-201ENST00000336873 SURF2Q15527 256 aaPredicted RBP7.01□□□□□ -1.29
HPS4-201ENST00000336873 TRIP6Q15654 476 aaKnown RBP7.01□□□□□ -1.29
HPS4-201ENST00000336873 C10orf128Q5T292 105 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 VWA1Q6PCB0 445 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 ZNF66Q6ZN08 573 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 SELENOHQ8IZQ5 122 aaKnown RBP7.01□□□□□ -1.29
HPS4-201ENST00000336873 FGFRL1Q8N441 504 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 TMEM171Q8WVE6 324 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 TMEM54Q969K7 222 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 GNPNAT1Q96EK6 184 aaPredicted RBP7.01□□□□□ -1.29
HPS4-201ENST00000336873 ATG101Q9BSB4 218 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 PPP1R14DQ9NXH3 145 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 POLDIP2Q9Y2S7 368 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 POMT1Q9Y6A1 747 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 V9GYS6 101 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 WNK1Q9H4A3 2382 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 C2CD3Q4AC94 2353 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 USP9YO00507 2555 aaPredicted RBP7.01□□□□□ -1.29
HPS4-201ENST00000336873 DYSFO75923 2080 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 TRAV38-1A0A0B4J264 116 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 A0A0G2JRQ6 117 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 A0A1W2PRD5 423 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 A0A1W2PRF3 423 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 A0A1W2PRM7 423 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 PAGE4O60829 102 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 ZG16O60844 167 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 NEURL1O76050 574 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 DTYMKP23919 212 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 PSMB3P49720 205 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 FGF12P61328 243 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 ZNF385CQ66K41 422 aaPredicted RBP7.01□□□□□ -1.29
HPS4-201ENST00000336873 TMEM211Q6ICI0 200 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 OR4C12Q96R67 309 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 BARX1Q9HBU1 254 aaPredicted RBP7.01□□□□□ -1.29
HPS4-201ENST00000336873 PARP11Q9NR21 331 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 CENPEQ02224 2701 aa7.01□□□□□ -1.29
HPS4-201ENST00000336873 RAMP3O60896 148 aa7□□□□□ -1.29
HPS4-201ENST00000336873 NAAAQ02083 359 aa7□□□□□ -1.29
HPS4-201ENST00000336873 FBXW9Q5XUX1 488 aa7□□□□□ -1.29
HPS4-201ENST00000336873 NCR3LG1Q68D85 454 aa7□□□□□ -1.29
HPS4-201ENST00000336873 PRR27Q6MZM9 219 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms