RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 FAM90A26D6RGX4 464 aa19.65■□□□□ 0.74
NDEL1-201ENST00000334527 ZNF806P0C7X5 589 aa19.65■□□□□ 0.74
NDEL1-201ENST00000334527 BCL2P10415 239 aa19.65■□□□□ 0.74
NDEL1-201ENST00000334527 RAB11AP62491 216 aa19.65■□□□□ 0.74
NDEL1-201ENST00000334527 SERF2P84101 59 aa19.65■□□□□ 0.74
NDEL1-201ENST00000334527 ZNF343Q6P1L6 599 aa19.65■□□□□ 0.74
NDEL1-201ENST00000334527 FAM180AQ6UWF9 173 aa19.65■□□□□ 0.74
NDEL1-201ENST00000334527 NANPQ8TBE9 248 aa19.65■□□□□ 0.74
NDEL1-201ENST00000334527 MBD3L1Q8WWY6 194 aa19.65■□□□□ 0.74
NDEL1-201ENST00000334527 RBKSQ9H477 322 aa19.65■□□□□ 0.74
NDEL1-201ENST00000334527 GTF3C1Q12789 2109 aa19.65■□□□□ 0.74
NDEL1-201ENST00000334527 AP4M1O00189 453 aa19.64■□□□□ 0.74
NDEL1-201ENST00000334527 CLDN1O95832 211 aa19.64■□□□□ 0.74
NDEL1-201ENST00000334527 TNFRSF9Q07011 255 aa19.64■□□□□ 0.74
NDEL1-201ENST00000334527 SLC38A11Q08AI6 406 aa19.64■□□□□ 0.74
NDEL1-201ENST00000334527 C11orf53Q8IXP5 236 aa19.64■□□□□ 0.74
NDEL1-201ENST00000334527 C5orf30Q96GV9 206 aa19.64■□□□□ 0.74
NDEL1-201ENST00000334527 CISD1Q9NZ45 108 aaKnown RBP19.64■□□□□ 0.74
NDEL1-201ENST00000334527 UBE2L5PA0A1B0GUS4 154 aa19.64■□□□□ 0.73
NDEL1-201ENST00000334527 OOEPA6NGQ2 149 aa19.64■□□□□ 0.73
NDEL1-201ENST00000334527 WISP2O76076 250 aa19.64■□□□□ 0.73
NDEL1-201ENST00000334527 KRASP01116 189 aa19.64■□□□□ 0.73
NDEL1-201ENST00000334527 HBZP02008 142 aa19.64■□□□□ 0.73
NDEL1-201ENST00000334527 TFF1P04155 84 aa19.64■□□□□ 0.73
NDEL1-201ENST00000334527 HOXC12P31275 282 aa19.64■□□□□ 0.73
NDEL1-201ENST00000334527 G6PCP35575 357 aa19.64■□□□□ 0.73
NDEL1-201ENST00000334527 RPL30P62888 115 aaKnown RBP19.64■□□□□ 0.73
NDEL1-201ENST00000334527 S100A12P80511 92 aa19.64■□□□□ 0.73
NDEL1-201ENST00000334527 ZNF816Q0VGE8 651 aaPredicted RBP19.64■□□□□ 0.73
NDEL1-201ENST00000334527 SLC35E4Q6ICL7 350 aa19.64■□□□□ 0.73
NDEL1-201ENST00000334527 OR8G2PQ6IF36 304 aa19.64■□□□□ 0.73
NDEL1-201ENST00000334527 ZBTB34Q8NCN2 500 aa19.64■□□□□ 0.73
NDEL1-201ENST00000334527 Q8WTZ3 238 aa19.64■□□□□ 0.73
NDEL1-201ENST00000334527 URGCP-MRPS24S4R325 110 aa19.64■□□□□ 0.73
NDEL1-201ENST00000334527 IGHG3P01860 377 aa19.63■□□□□ 0.73
NDEL1-201ENST00000334527 CCL11P51671 97 aa19.63■□□□□ 0.73
NDEL1-201ENST00000334527 ELLP55199 621 aaPredicted RBP19.63■□□□□ 0.73
NDEL1-201ENST00000334527 ELOBQ15370 118 aa19.63■□□□□ 0.73
NDEL1-201ENST00000334527 SEBOXQ9HB31 216 aaPredicted RBP19.63■□□□□ 0.73
NDEL1-201ENST00000334527 TMEM41BQ5BJD5 291 aa19.63■□□□□ 0.73
NDEL1-201ENST00000334527 FAM90A2PQ658T7 463 aa19.63■□□□□ 0.73
NDEL1-201ENST00000334527 PARD6GQ9BYG4 376 aaPredicted RBP19.63■□□□□ 0.73
NDEL1-201ENST00000334527 CXXC4Q9H2H0 198 aa19.63■□□□□ 0.73
NDEL1-201ENST00000334527 BDP1A6H8Y1 2624 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 C1QTNF9BB2RNN3 333 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 IGKV3-15P01624 115 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 GABRA2P47869 451 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 GUSBP1Q15486 140 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 PRAMEF6Q5VXH4 476 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 TAF15Q92804 592 aaKnown RBP eCLIP19.62■□□□□ 0.73
NDEL1-201ENST00000334527 NINJ1Q92982 152 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 COQ2Q96H96 371 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 SIRT7Q9NRC8 400 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 HSPB7Q9UBY9 170 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 FZR1Q9UM11 496 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 NKX2-8O15522 239 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 CXCL1P09341 107 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 GLIPR1P48060 266 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 MSMO1Q15800 293 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 VWA1Q6PCB0 445 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 TMEM14EPQ6UXP3 125 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 ACP7Q6ZNF0 438 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 Q6ZR03 302 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 WDR31Q8NA23 367 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 MRGPRDQ8TDS7 321 aa19.62■□□□□ 0.73
NDEL1-201ENST00000334527 TIMM8AO60220 97 aaPredicted RBP19.61■□□□□ 0.73
NDEL1-201ENST00000334527 ERVFRD-1P60508 538 aa19.61■□□□□ 0.73
NDEL1-201ENST00000334527 EIF4EBP1Q13541 118 aaPredicted RBP19.61■□□□□ 0.73
NDEL1-201ENST00000334527 TRIP6Q15654 476 aaKnown RBP19.61■□□□□ 0.73
NDEL1-201ENST00000334527 FDCSPQ8NFU4 85 aa19.61■□□□□ 0.73
NDEL1-201ENST00000334527 TCEAL7Q9BRU2 100 aa19.61■□□□□ 0.73
NDEL1-201ENST00000334527 UFSP2Q9NUQ7 469 aa19.61■□□□□ 0.73
NDEL1-201ENST00000334527 CXorf65A6NEN9 183 aa19.61■□□□□ 0.73
NDEL1-201ENST00000334527 S1PR2O95136 353 aa19.61■□□□□ 0.73
NDEL1-201ENST00000334527 KIR2DL2P43627 348 aaPredicted RBP19.61■□□□□ 0.73
NDEL1-201ENST00000334527 CTAG1AP78358 180 aa19.61■□□□□ 0.73
NDEL1-201ENST00000334527 CATR1Q13166 79 aa19.61■□□□□ 0.73
NDEL1-201ENST00000334527 SRSF6Q13247 344 aaKnown RBP19.61■□□□□ 0.73
NDEL1-201ENST00000334527 TCTEX1D2Q8WW35 142 aa19.61■□□□□ 0.73
NDEL1-201ENST00000334527 PINX1Q96BK5 328 aaKnown RBP19.61■□□□□ 0.73
NDEL1-201ENST00000334527 DIDO1Q9BTC0 2240 aaKnown RBP19.6■□□□□ 0.73
NDEL1-201ENST00000334527 P0C879 139 aa19.6■□□□□ 0.73
NDEL1-201ENST00000334527 HOXB1P14653 301 aaPredicted RBP19.6■□□□□ 0.73
NDEL1-201ENST00000334527 KIAA0141Q14154 515 aaPredicted RBP19.6■□□□□ 0.73
NDEL1-201ENST00000334527 ACSF3Q4G176 576 aaPredicted RBP19.6■□□□□ 0.73
NDEL1-201ENST00000334527 BTNL3Q6UXE8 466 aa19.6■□□□□ 0.73
NDEL1-201ENST00000334527 WDR82Q6UXN9 313 aa19.6■□□□□ 0.73
NDEL1-201ENST00000334527 PCNX2A6NKB5 2137 aa19.6■□□□□ 0.73
NDEL1-201ENST00000334527 ODAMA1E959 279 aa19.59■□□□□ 0.73
NDEL1-201ENST00000334527 MAP1LC3B2A6NCE7 125 aa19.59■□□□□ 0.73
NDEL1-201ENST00000334527 COX5AP20674 150 aa19.59■□□□□ 0.73
NDEL1-201ENST00000334527 HNF4GQ14541 408 aa19.59■□□□□ 0.73
NDEL1-201ENST00000334527 C9orf106Q8NAJ2 232 aa19.59■□□□□ 0.73
NDEL1-201ENST00000334527 MAP1LC3BQ9GZQ8 125 aa19.59■□□□□ 0.73
NDEL1-201ENST00000334527 CLN8Q9UBY8 286 aa19.59■□□□□ 0.73
NDEL1-201ENST00000334527 TGIF2-C20orf24A0A0A6YYL0 155 aa19.59■□□□□ 0.73
NDEL1-201ENST00000334527 LRRC30A6NM36 301 aa19.59■□□□□ 0.73
NDEL1-201ENST00000334527 C17orf98A8MV24 154 aa19.59■□□□□ 0.73
NDEL1-201ENST00000334527 B4DEV8 164 aa19.59■□□□□ 0.73
NDEL1-201ENST00000334527 PTBP3O95758 552 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms