RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 PIGPP57054 158 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 DHODHQ02127 395 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 PHLDA2Q53GA4 152 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 METTL11BQ5VVY1 283 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 CMTM1Q8IZ96 169 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 LINC00311Q8N616 119 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 ZBTB34Q8NCN2 500 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 CAPSLQ8WWF8 208 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 INSIG2Q9Y5U4 225 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 ALG5Q9Y673 324 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 CR1P17927 2039 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 MED13LQ71F56 2210 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 IGHV2-26A0A0B4J1V2 119 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 PRTN3P24158 256 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 GPR12P47775 334 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 TMEM128Q5BJH2 165 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 DRAM1Q8N682 238 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 OR9G1Q8NH87 305 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 TNFRSF14Q92956 283 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 C5orf30Q96GV9 206 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 ABHD14BQ96IU4 210 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 SEC22CQ9BRL7 303 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 GPN1Q9HCN4 374 aaPredicted RBP8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 RNF150Q9ULK6 438 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 TRAV20A0A0B4J274 112 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 A0A1W2PPE3 182 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 CRYM-AS1A6NIL9 109 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 J3QR06 171 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 MMP9P14780 707 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 S100GP29377 79 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 PPP1R1AQ13522 171 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 C4orf46Q504U0 113 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 VMO1Q7Z5L0 202 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 LYG2Q86SG7 212 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 ABHD12Q8N2K0 398 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 LINC01356Q8N9X3 169 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 WFDC11Q8NEX6 87 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 OR13D1Q8NGV5 346 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 RTN4IP1Q8WWV3 396 aaPredicted RBP8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 CLEC7AQ9BXN2 247 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 GHITMQ9H3K2 345 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 NAA60Q9H7X0 242 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 GAB2Q9UQC2 676 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 MAP1AP78559 2803 aaPredicted RBP8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 ASH1LQ9NR48 2969 aaKnown RBP8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.36□□□□□ -1.072e-6■■■■□ 24
VIPAS39-201ENST00000327028 ITPR3Q14573 2671 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 hCG_2014768A0A024R1R8 64 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 A0A0A6YYJ9 748 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 SNRPGP15A8MWD9 76 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 DHRS2Q13268 280 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 EIF4EBP1Q13541 118 aaPredicted RBP8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 SGPP2Q8IWX5 399 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 SIRT7Q9NRC8 400 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 SDHAF2Q9NX18 166 aa8.36□□□□□ -1.07
VIPAS39-201ENST00000327028 C9orf170A2RU37 121 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 TOR1AO14656 332 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 RAB29O14966 203 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 PGLYRP1O75594 196 aaPredicted RBP8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 TOX4O94842 621 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 HLA-AP01891 365 aaKnown RBP8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 HOXB4P17483 251 aaPredicted RBP8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 COX7A1P24310 79 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 DLX1P56177 255 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 SUPT4H1P63272 117 aaKnown RBP8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 PAX8Q06710 450 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 ZNF626Q68DY1 528 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 C11orf88Q6PI97 169 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 TBC1D26Q86UD7 250 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 ODF3L1Q8IXM7 274 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 LYG1Q8N1E2 194 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 BEND2Q8NDZ0 799 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 OR11H6Q8NGC7 330 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 ZNF431Q8TF32 576 aaPredicted RBP8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 TBX15Q96SF7 602 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 HEXA-AS1Q9H8Q6 139 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 PIPOXQ9P0Z9 390 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 SAA2-SAA4A0A096LPE2 208 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 TEX13DA0A0J9YY54 714 aaPredicted RBP8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 MPPED1O15442 326 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 CREBL2O60519 120 aaPredicted RBP8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 SFT2D2O95562 160 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 IGLV1-47P01700 117 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 SAA2P0DJI9 122 aaPredicted RBP8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 IGHV4-31P0DP07 118 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 VAMP1P23763 118 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 PRRX1P54821 245 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 NCR3LG1Q68D85 454 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 HCP5Q6MZN7 132 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 KCTD9Q7L273 389 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 PNKDQ8N490 385 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 OR52B4Q8NGK2 314 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 OR10X1Q8NGY0 326 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 OR51J1Q9H342 316 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 ZNRD1Q9P1U0 126 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 WNK2Q9Y3S1 2297 aa8.35□□□□□ -1.07
VIPAS39-201ENST00000327028 RNF212BA8MTL3 300 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 TNFSF12O43508 249 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 IFNA2P01563 188 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms