RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 THOC7Q6I9Y2 204 aaKnown RBP14.77□□□□□ -0.05
RAB39A-201ENST00000320578 C11orf71Q6IPW1 123 aa14.77□□□□□ -0.05
RAB39A-201ENST00000320578 TCF23Q7RTU1 214 aa14.77□□□□□ -0.05
RAB39A-201ENST00000320578 FAM71E2Q8N5Q1 922 aa14.77□□□□□ -0.05
RAB39A-201ENST00000320578 ARPC5LQ9BPX5 153 aa14.77□□□□□ -0.05
RAB39A-201ENST00000320578 NSG2Q9Y328 171 aa14.77□□□□□ -0.05
RAB39A-201ENST00000320578 KIAA2026Q5HYC2 2103 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 ZNF585BQ52M93 769 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 DTX2Q86UW9 622 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 RRNAD1Q96FB5 475 aaKnown RBP14.76□□□□□ -0.05
RAB39A-201ENST00000320578 RAB1BQ9H0U4 201 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 IDI2-AS1Q9NZ38 188 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 TANC2Q9HCD6 1990 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 IGHV3-43A0A0B4J1X8 118 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 NDUFB3O43676 98 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 ATG12O94817 140 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 IGHV3-43DP0DP04 118 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 MMP9P14780 707 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 IGFBP2P18065 325 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 HTR2BP41595 481 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 Q3ZCU0 254 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 LRRC10Q5BKY1 277 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.76□□□□□ -0.05
RAB39A-201ENST00000320578 PHYHIPLQ96FC7 376 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 C5orf30Q96GV9 206 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 SDHAF2Q9NX18 166 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 RNF150Q9ULK6 438 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 PSG11Q9UQ72 335 aa14.76□□□□□ -0.05
RAB39A-201ENST00000320578 NBASA2RRP1 2371 aa14.75□□□□□ -0.05
RAB39A-201ENST00000320578 DIDO1Q9BTC0 2240 aaKnown RBP14.75□□□□□ -0.05
RAB39A-201ENST00000320578 TAAR5O14804 337 aa14.75□□□□□ -0.05
RAB39A-201ENST00000320578 ADAM20O43506 726 aa14.75□□□□□ -0.05
RAB39A-201ENST00000320578 PITX3O75364 302 aa14.75□□□□□ -0.05
RAB39A-201ENST00000320578 GOSR1O95249 250 aa14.75□□□□□ -0.05
RAB39A-201ENST00000320578 ID3Q02535 119 aa14.75□□□□□ -0.05
RAB39A-201ENST00000320578 CLLU1Q5K131 121 aa14.75□□□□□ -0.05
RAB39A-201ENST00000320578 GPR157Q5UAW9 335 aa14.75□□□□□ -0.05
RAB39A-201ENST00000320578 FAM53AQ6NSI3 398 aaPredicted RBP14.75□□□□□ -0.05
RAB39A-201ENST00000320578 STOML3Q8TAV4 291 aa14.75□□□□□ -0.05
RAB39A-201ENST00000320578 CD300LFQ8TDQ1 290 aa14.75□□□□□ -0.05
RAB39A-201ENST00000320578 SCARB1Q8WTV0 552 aa14.75□□□□□ -0.05
RAB39A-201ENST00000320578 NEU4Q8WWR8 484 aaPredicted RBP14.75□□□□□ -0.05
RAB39A-201ENST00000320578 GSX2Q9BZM3 304 aa14.75□□□□□ -0.05
RAB39A-201ENST00000320578 GAL3ST2Q9H3Q3 398 aa14.75□□□□□ -0.05
RAB39A-201ENST00000320578 ARFGEF3Q5TH69 2177 aa14.75□□□□□ -0.05
RAB39A-201ENST00000320578 ROS1P08922 2347 aa14.75□□□□□ -0.05
RAB39A-201ENST00000320578 IGKV1-39P01597 117 aa14.74□□□□□ -0.05
RAB39A-201ENST00000320578 IGKV1D-39P04432 117 aa14.74□□□□□ -0.05
RAB39A-201ENST00000320578 HKR1P10072 659 aa14.74□□□□□ -0.05
RAB39A-201ENST00000320578 NDUFB7P17568 137 aa14.74□□□□□ -0.05
RAB39A-201ENST00000320578 NKX2-1P43699 371 aaPredicted RBP14.74□□□□□ -0.05
RAB39A-201ENST00000320578 P2RY1P47900 373 aa14.74□□□□□ -0.05
RAB39A-201ENST00000320578 FAM219AQ8IW50 185 aa14.74□□□□□ -0.05
RAB39A-201ENST00000320578 LAMP3Q9UQV4 416 aa14.74□□□□□ -0.05
RAB39A-201ENST00000320578 LSM5Q9Y4Y9 91 aaKnown RBP14.74□□□□□ -0.05
RAB39A-201ENST00000320578 ACACBO00763 2458 aa14.73□□□□□ -0.05
RAB39A-201ENST00000320578 ST8SIA5O15466 376 aa14.73□□□□□ -0.05
RAB39A-201ENST00000320578 CLDN1O95832 211 aa14.73□□□□□ -0.05
RAB39A-201ENST00000320578 DANCRP0C864 163 aa14.73□□□□□ -0.05
RAB39A-201ENST00000320578 GPR12P47775 334 aa14.73□□□□□ -0.05
RAB39A-201ENST00000320578 RPL31P62899 125 aaKnown RBP14.73□□□□□ -0.05
RAB39A-201ENST00000320578 ST8SIA2Q92186 375 aa14.73□□□□□ -0.05
RAB39A-201ENST00000320578 GPR146Q96CH1 333 aa14.73□□□□□ -0.05
RAB39A-201ENST00000320578 C11orf1Q9H5F2 150 aa14.73□□□□□ -0.05
RAB39A-201ENST00000320578 RPUSD1Q9UJJ7 312 aaKnown RBP14.73□□□□□ -0.05
RAB39A-201ENST00000320578 HIVEP3Q5T1R4 2406 aa14.73□□□□□ -0.05
RAB39A-201ENST00000320578 SCGB1D2O95969 90 aa14.73□□□□□ -0.05
RAB39A-201ENST00000320578 RPL12P30050 165 aaKnown RBP14.73□□□□□ -0.05
RAB39A-201ENST00000320578 IFI27L2Q9H2X8 130 aa14.73□□□□□ -0.05
RAB39A-201ENST00000320578 COA4Q9NYJ1 87 aa14.73□□□□□ -0.05
RAB39A-201ENST00000320578 MSGN1A6NI15 193 aa14.72□□□□□ -0.05
RAB39A-201ENST00000320578 F5H0A9 414 aaPredicted RBP14.72□□□□□ -0.05
RAB39A-201ENST00000320578 GPR37O15354 613 aa14.72□□□□□ -0.05
RAB39A-201ENST00000320578 PVALBP20472 110 aaPredicted RBP14.72□□□□□ -0.05
RAB39A-201ENST00000320578 COL8A2P25067 703 aa14.72□□□□□ -0.05
RAB39A-201ENST00000320578 LPAR6P43657 344 aa14.72□□□□□ -0.05
RAB39A-201ENST00000320578 RAB14P61106 215 aa14.72□□□□□ -0.05
RAB39A-201ENST00000320578 RPL30P62888 115 aaKnown RBP14.72□□□□□ -0.05
RAB39A-201ENST00000320578 SLC7A5P1Q8MH63 180 aa14.72□□□□□ -0.05
RAB39A-201ENST00000320578 OR8H3Q8N146 312 aa14.72□□□□□ -0.05
RAB39A-201ENST00000320578 ZNF439Q8NDP4 499 aa14.72□□□□□ -0.05
RAB39A-201ENST00000320578 DMBX1Q8NFW5 382 aa14.72□□□□□ -0.05
RAB39A-201ENST00000320578 ABHD14AQ9BUJ0 271 aa14.72□□□□□ -0.05
RAB39A-201ENST00000320578 ADGRG4Q8IZF6 3080 aa14.72□□□□□ -0.05
RAB39A-201ENST00000320578 TRBV23-1A0A0A0MS06 115 aa14.71□□□□□ -0.05
RAB39A-201ENST00000320578 RPS10-NUDT3A0A1W2PQS6 291 aa14.71□□□□□ -0.05
RAB39A-201ENST00000320578 RBFOX2O43251 390 aaKnown RBP eCLIP14.71□□□□□ -0.05
RAB39A-201ENST00000320578 FCN3O75636 299 aa14.71□□□□□ -0.05
RAB39A-201ENST00000320578 IGKV1-5P01602 117 aa14.71□□□□□ -0.05
RAB39A-201ENST00000320578 IGHV2-70P01814 119 aa14.71□□□□□ -0.05
RAB39A-201ENST00000320578 ZNF16P17020 682 aaPredicted RBP14.71□□□□□ -0.05
RAB39A-201ENST00000320578 DUTP33316 252 aaKnown RBP14.71□□□□□ -0.05
RAB39A-201ENST00000320578 ZNF134P52741 427 aa14.71□□□□□ -0.05
RAB39A-201ENST00000320578 EIF5AP63241 154 aaKnown RBP14.71□□□□□ -0.05
RAB39A-201ENST00000320578 LTC4SQ16873 150 aa14.71□□□□□ -0.05
RAB39A-201ENST00000320578 LYPD2Q6UXB3 125 aa14.71□□□□□ -0.05
RAB39A-201ENST00000320578 HEPN1Q6WQI6 88 aa14.71□□□□□ -0.05
RAB39A-201ENST00000320578 FOXRED2Q8IWF2 684 aa14.71□□□□□ -0.05
RAB39A-201ENST00000320578 ZNF471Q9BX82 626 aaPredicted RBP14.71□□□□□ -0.05
RAB39A-201ENST00000320578 CYTL1Q9NRR1 136 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms