RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 FOXRED2Q8IWF2 684 aa13.03□□□□□ -0.32
CALR-201ENST00000316448 C1orf87Q8N0U7 546 aa13.03□□□□□ -0.32
CALR-201ENST00000316448 CLEC18CQ8NCF0 446 aa13.03□□□□□ -0.32
CALR-201ENST00000316448 ZFP57Q9NU63 452 aa13.03□□□□□ -0.32
CALR-201ENST00000316448 TMPRSS2O15393 492 aa13.03□□□□□ -0.32
CALR-201ENST00000316448 C17orf58Q2M2W7 97 aa13.03□□□□□ -0.32
CALR-201ENST00000316448 TRAT1Q6PIZ9 186 aa13.03□□□□□ -0.32
CALR-201ENST00000316448 DTX2Q86UW9 622 aa13.03□□□□□ -0.32
CALR-201ENST00000316448 MED9Q9NWA0 146 aa13.03□□□□□ -0.32
CALR-201ENST00000316448 CTSZQ9UBR2 303 aa13.03□□□□□ -0.32
CALR-201ENST00000316448 ZNF462Q96JM2 2506 aa13.02□□□□□ -0.32
CALR-201ENST00000316448 PIGBOS1A0A0B4J2F0 54 aa13.02□□□□□ -0.32
CALR-201ENST00000316448 SCGB1D2O95969 90 aa13.02□□□□□ -0.32
CALR-201ENST00000316448 VDAC1P21796 283 aa13.02□□□□□ -0.32
CALR-201ENST00000316448 IL2RGP31785 369 aa13.02□□□□□ -0.32
CALR-201ENST00000316448 PPP1CCP36873 323 aaKnown RBP13.02□□□□□ -0.32
CALR-201ENST00000316448 LTC4SQ16873 150 aa13.02□□□□□ -0.32
CALR-201ENST00000316448 COMMD7Q86VX2 200 aa13.02□□□□□ -0.32
CALR-201ENST00000316448 SPIN2AQ99865 258 aa13.02□□□□□ -0.32
CALR-201ENST00000316448 SPIN2BQ9BPZ2 258 aa13.02□□□□□ -0.32
CALR-201ENST00000316448 SLC25A32Q9H2D1 315 aa13.02□□□□□ -0.32
CALR-201ENST00000316448 LSM5Q9Y4Y9 91 aaKnown RBP13.02□□□□□ -0.32
CALR-201ENST00000316448 A6NNC1 897 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 E5RGE8 158 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 OR8U9P0C7N5 309 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 DRAM1Q8N682 238 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 OR8U1Q8NH10 309 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 OR51H1Q8NH63 302 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 C5orf30Q96GV9 206 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 FAM234AQ9H0X4 552 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 PLEKHA2Q9HB19 425 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 RNF150Q9ULK6 438 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 LAMP3Q9UQV4 416 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 RCL1Q9Y2P8 373 aaKnown RBP13.01□□□□□ -0.33
CALR-201ENST00000316448 NSG2Q9Y328 171 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 POMT1Q9Y6A1 747 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 ARID1AO14497 2285 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 ST8SIA3O43173 380 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 TPT1P13693 172 aaKnown RBP13.01□□□□□ -0.33
CALR-201ENST00000316448 GZMHP20718 246 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 OMGP23515 440 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 RPL12P30050 165 aaKnown RBP13.01□□□□□ -0.33
CALR-201ENST00000316448 HFEQ30201 348 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 ZNF645Q8N7E2 425 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 C14orf79Q96F83 325 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 ABHD14BQ96IU4 210 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 CXorf58Q96LI9 332 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 NCOR1P1Q9H4R4 102 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 C11orf1Q9H5F2 150 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 UBTD1Q9HAC8 227 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 LIN7CQ9NUP9 197 aaKnown RBP13.01□□□□□ -0.33
CALR-201ENST00000316448 KCNS2Q9ULS6 477 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 DCHS2Q6V1P9 2916 aa13.01□□□□□ -0.33
CALR-201ENST00000316448 TAAR5O14804 337 aa13□□□□□ -0.33
CALR-201ENST00000316448 ADAM20O43506 726 aa13□□□□□ -0.33
CALR-201ENST00000316448 HTD2P86397 168 aa13□□□□□ -0.33
CALR-201ENST00000316448 MSMO1Q15800 293 aa13□□□□□ -0.33
CALR-201ENST00000316448 FAM74A1Q5RGS3 127 aa13□□□□□ -0.33
CALR-201ENST00000316448 OR2S2Q9NQN1 319 aa13□□□□□ -0.33
CALR-201ENST00000316448 RBM7Q9Y580 266 aaKnown RBP13□□□□□ -0.33
CALR-201ENST00000316448 DSCAML1Q8TD84 2053 aa13□□□□□ -0.33
CALR-201ENST00000316448 USP9XQ93008 2570 aaPredicted RBP13□□□□□ -0.33
CALR-201ENST00000316448 NDUFS7O75251 213 aa13□□□□□ -0.33
CALR-201ENST00000316448 NDUFB7P17568 137 aa13□□□□□ -0.33
CALR-201ENST00000316448 LOXL3P58215 753 aa13□□□□□ -0.33
CALR-201ENST00000316448 ERVFRD-1P60508 538 aa13□□□□□ -0.33
CALR-201ENST00000316448 EIF4EBP1Q13541 118 aaPredicted RBP13□□□□□ -0.33
CALR-201ENST00000316448 BAP18Q8IXM2 172 aa13□□□□□ -0.33
CALR-201ENST00000316448 PDZD9Q8IXQ8 264 aa13□□□□□ -0.33
CALR-201ENST00000316448 ZBTB34Q8NCN2 500 aa13□□□□□ -0.33
CALR-201ENST00000316448 DMBX1Q8NFW5 382 aa13□□□□□ -0.33
CALR-201ENST00000316448 C19orf12Q9NSK7 152 aa13□□□□□ -0.33
CALR-201ENST00000316448 CALYQ9NYX4 217 aa13□□□□□ -0.33
CALR-201ENST00000316448 SLC25A10Q9UBX3 287 aaPredicted RBP13□□□□□ -0.33
CALR-201ENST00000316448 FLNCQ14315 2725 aa12.99□□□□□ -0.33
CALR-201ENST00000316448 NKX6-3A6NJ46 265 aa12.99□□□□□ -0.33
CALR-201ENST00000316448 F2RL2O00254 374 aa12.99□□□□□ -0.33
CALR-201ENST00000316448 SPINT2O43291 252 aa12.99□□□□□ -0.33
CALR-201ENST00000316448 MMP23AO75900 390 aa12.99□□□□□ -0.33
CALR-201ENST00000316448 IGKV1-39P01597 117 aa12.99□□□□□ -0.33
CALR-201ENST00000316448 IGKV1D-39P04432 117 aa12.99□□□□□ -0.33
CALR-201ENST00000316448 SERPINE2P07093 398 aa12.99□□□□□ -0.33
CALR-201ENST00000316448 CDKN1AP38936 164 aa12.99□□□□□ -0.33
CALR-201ENST00000316448 NINJ1Q92982 152 aa12.99□□□□□ -0.33
CALR-201ENST00000316448 RAB1BQ9H0U4 201 aa12.99□□□□□ -0.33
CALR-201ENST00000316448 OR2D2Q9H210 308 aa12.99□□□□□ -0.33
CALR-201ENST00000316448 OR6C3Q9NZP0 311 aa12.99□□□□□ -0.33
CALR-201ENST00000316448 IGHV3-7P01780 117 aa12.98□□□□□ -0.33
CALR-201ENST00000316448 IGHV2-70P01814 119 aa12.98□□□□□ -0.33
CALR-201ENST00000316448 SLC25A6P12236 298 aa12.98□□□□□ -0.33
CALR-201ENST00000316448 P2RY1P47900 373 aa12.98□□□□□ -0.33
CALR-201ENST00000316448 ZNF273Q14593 569 aa12.98□□□□□ -0.33
CALR-201ENST00000316448 ZNF585BQ52M93 769 aa12.98□□□□□ -0.33
CALR-201ENST00000316448 AVPI1Q5T686 147 aa12.98□□□□□ -0.33
CALR-201ENST00000316448 CORO2AQ92828 525 aa12.98□□□□□ -0.33
CALR-201ENST00000316448 MARVELD3Q96A59 401 aa12.98□□□□□ -0.33
CALR-201ENST00000316448 REG4Q9BYZ8 158 aa12.98□□□□□ -0.33
CALR-201ENST00000316448 SPTAN1Q13813 2472 aaKnown RBP12.98□□□□□ -0.33
CALR-201ENST00000316448 DOPEY1Q5JWR5 2465 aa12.98□□□□□ -0.33
CALR-201ENST00000316448 A0A0G2JRQ6 117 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms