RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CT45A5P0DMU8 189 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 CT45A7P0DMV0 189 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 CD33P20138 364 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 THBS3P49746 956 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 PSMD7P51665 324 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 ACTBP60709 375 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 RPL39P5Q59GN2 51 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 KHDC1LQ5JSQ8 128 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 FAM71F2Q6NXP2 309 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 LCNL1Q6ZST4 164 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 C8orf86Q6ZUL3 223 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 MRPL41Q8IXM3 137 aaKnown RBP15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 COMMD1Q8N668 190 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 P2RX4Q99571 388 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 C12orf4Q9NQ89 552 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 ZFP57Q9NU63 452 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 AURKAIP1Q9NWT8 199 aaPredicted RBP15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 ABRACLQ9P1F3 81 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 ZNF107Q9UII5 783 aaPredicted RBP15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 A0A0B4J203 849 aa15.53■□□□□ 0.08
PDZRN3-202ENST00000308537 IFITM5A6NNB3 132 aa15.53■□□□□ 0.08
PDZRN3-202ENST00000308537 NDUFA3O95167 84 aa15.53■□□□□ 0.08
PDZRN3-202ENST00000308537 PF4P02776 101 aa15.53■□□□□ 0.08
PDZRN3-202ENST00000308537 GALP22466 123 aa15.53■□□□□ 0.08
PDZRN3-202ENST00000308537 NPBQ8NG41 125 aa15.53■□□□□ 0.08
PDZRN3-202ENST00000308537 PTX4Q96A99 478 aa15.53■□□□□ 0.08
PDZRN3-202ENST00000308537 ABHD14BQ96IU4 210 aa15.53■□□□□ 0.08
PDZRN3-202ENST00000308537 RASL11BQ9BPW5 248 aa15.53■□□□□ 0.08
PDZRN3-202ENST00000308537 C11orf54Q9H0W9 315 aaPredicted RBP15.53■□□□□ 0.08
PDZRN3-202ENST00000308537 CHMP1AQ9HD42 196 aaPredicted RBP15.53■□□□□ 0.08
PDZRN3-202ENST00000308537 NECAP2Q9NVZ3 263 aa15.53■□□□□ 0.08
PDZRN3-202ENST00000308537 IGHG4P01861 327 aa15.52■□□□□ 0.08
PDZRN3-202ENST00000308537 RPLP1P05386 114 aaKnown RBP15.52■□□□□ 0.08
PDZRN3-202ENST00000308537 SLC2A2P11168 524 aaPredicted RBP15.52■□□□□ 0.08
PDZRN3-202ENST00000308537 SOX6P35712 828 aa15.52■□□□□ 0.08
PDZRN3-202ENST00000308537 MMDQ15546 238 aa15.52■□□□□ 0.08
PDZRN3-202ENST00000308537 PNLIPRP3Q17RR3 467 aa15.52■□□□□ 0.08
PDZRN3-202ENST00000308537 OR56B1Q8NGI3 324 aa15.52■□□□□ 0.08
PDZRN3-202ENST00000308537 SETD6Q8TBK2 473 aa15.52■□□□□ 0.08
PDZRN3-202ENST00000308537 MYOZ3Q8TDC0 251 aa15.52■□□□□ 0.08
PDZRN3-202ENST00000308537 TOLLIPQ9H0E2 274 aa15.52■□□□□ 0.08
PDZRN3-202ENST00000308537 PIPOXQ9P0Z9 390 aa15.52■□□□□ 0.08
PDZRN3-202ENST00000308537 RAB22AQ9UL26 194 aa15.52■□□□□ 0.08
PDZRN3-202ENST00000308537 IGHV7-81A0A0B4J1V7 117 aa15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 MFNGO00587 321 aa15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 HLA-DRB1P01911 266 aa15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 SNRPBP14678 240 aaKnown RBP15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 PSMB8P28062 276 aa15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 PPIFP30405 207 aaKnown RBP15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 SLC35B1P78383 322 aa15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 NDPQ00604 133 aa15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 FOXE3Q13461 319 aa15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 KIAA0141Q14154 515 aaPredicted RBP15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 C22orf42Q6IC83 251 aa15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 TEX38Q6PEX7 206 aa15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 ZNF773Q6PK81 442 aa15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 GLDNQ6ZMI3 551 aaPredicted RBP15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 REC114Q7Z4M0 266 aa15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 OR5AN1Q8NGI8 311 aa15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 RCC1LQ96I51 464 aaKnown RBP15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 CMSS1Q9BQ75 279 aaKnown RBP15.51■□□□□ 0.07
PDZRN3-202ENST00000308537 H0YJW9 148 aa15.5■□□□□ 0.07
PDZRN3-202ENST00000308537 PDCD5O14737 125 aa15.5■□□□□ 0.07
PDZRN3-202ENST00000308537 RAB29O14966 203 aa15.5■□□□□ 0.07
PDZRN3-202ENST00000308537 PSMB9P28065 219 aa15.5■□□□□ 0.07
PDZRN3-202ENST00000308537 SLC6A1P30531 599 aa15.5■□□□□ 0.07
PDZRN3-202ENST00000308537 FGF9P31371 208 aaPredicted RBP15.5■□□□□ 0.07
PDZRN3-202ENST00000308537 LINC00205P59089 165 aa15.5■□□□□ 0.07
PDZRN3-202ENST00000308537 KRTAP10-11P60412 298 aa15.5■□□□□ 0.07
PDZRN3-202ENST00000308537 C5orf64Q2M2E5 130 aa15.5■□□□□ 0.07
PDZRN3-202ENST00000308537 KCTD21Q4G0X4 260 aa15.5■□□□□ 0.07
PDZRN3-202ENST00000308537 C19orf54Q5BKX5 351 aa15.5■□□□□ 0.07
PDZRN3-202ENST00000308537 FAM131AQ6UXB0 335 aa15.5■□□□□ 0.07
PDZRN3-202ENST00000308537 ZNF695Q8IW36 515 aa15.5■□□□□ 0.07
PDZRN3-202ENST00000308537 RAX2Q96IS3 184 aa15.5■□□□□ 0.07
PDZRN3-202ENST00000308537 MGAT4AQ9UM21 535 aa15.5■□□□□ 0.07
PDZRN3-202ENST00000308537 NBR2O15453 112 aa15.49■□□□□ 0.07
PDZRN3-202ENST00000308537 ELANEP08246 267 aa15.49■□□□□ 0.07
PDZRN3-202ENST00000308537 RAB3BP20337 219 aa15.49■□□□□ 0.07
PDZRN3-202ENST00000308537 RAB6AP20340 208 aa15.49■□□□□ 0.07
PDZRN3-202ENST00000308537 ZBTB25P24278 435 aa15.49■□□□□ 0.07
PDZRN3-202ENST00000308537 MYL9P24844 172 aa15.49■□□□□ 0.07
PDZRN3-202ENST00000308537 CEACAM6P40199 344 aa15.49■□□□□ 0.07
PDZRN3-202ENST00000308537 EGFEM1PQ0D2K5 195 aa15.49■□□□□ 0.07
PDZRN3-202ENST00000308537 KLHL30-AS1Q8NEE0 82 aa15.49■□□□□ 0.07
PDZRN3-202ENST00000308537 OR10R2Q8NGX6 335 aa15.49■□□□□ 0.07
PDZRN3-202ENST00000308537 KCTD7Q96MP8 289 aa15.49■□□□□ 0.07
PDZRN3-202ENST00000308537 DUX3Q96PT4 197 aa15.49■□□□□ 0.07
PDZRN3-202ENST00000308537 CABLES2Q9BTV7 478 aa15.49■□□□□ 0.07
PDZRN3-202ENST00000308537 TXNL4BQ9NX01 149 aaKnown RBP15.49■□□□□ 0.07
PDZRN3-202ENST00000308537 FBXO7Q9Y3I1 522 aa15.49■□□□□ 0.07
PDZRN3-202ENST00000308537 SMIM30A4D0T7 59 aa15.48■□□□□ 0.07
PDZRN3-202ENST00000308537 TRDCB7Z8K6 153 aa15.48■□□□□ 0.07
PDZRN3-202ENST00000308537 G3V318 75 aa15.48■□□□□ 0.07
PDZRN3-202ENST00000308537 ATP6V0E1O15342 81 aa15.48■□□□□ 0.07
PDZRN3-202ENST00000308537 FCGR3AP08637 254 aa15.48■□□□□ 0.07
PDZRN3-202ENST00000308537 MYCNOSP40205 109 aa15.48■□□□□ 0.07
PDZRN3-202ENST00000308537 CDX1P47902 265 aaPredicted RBP15.48■□□□□ 0.07
PDZRN3-202ENST00000308537 RAB3CQ96E17 227 aa15.48■□□□□ 0.07
PDZRN3-202ENST00000308537 C5orf30Q96GV9 206 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms