RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 FOXRED2Q8IWF2 684 aa7.72□□□□□ -1.17
CCDC58-201ENST00000291458 STPG2Q8N412 459 aa7.72□□□□□ -1.17
CCDC58-201ENST00000291458 C8orf31Q8N9H6 132 aa7.72□□□□□ -1.17
CCDC58-201ENST00000291458 KLHL30-AS1Q8NEE0 82 aa7.72□□□□□ -1.17
CCDC58-201ENST00000291458 ABHD14BQ96IU4 210 aa7.72□□□□□ -1.17
CCDC58-201ENST00000291458 DUX3Q96PT4 197 aa7.72□□□□□ -1.17
CCDC58-201ENST00000291458 IFI27L2Q9H2X8 130 aa7.72□□□□□ -1.17
CCDC58-201ENST00000291458 C12orf4Q9NQ89 552 aa7.72□□□□□ -1.17
CCDC58-201ENST00000291458 PKD1L1Q8TDX9 2849 aa7.71□□□□□ -1.17
CCDC58-201ENST00000291458 SCTP09683 121 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 CD3GP09693 182 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 GNB3P16520 340 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 RAB3BP20337 219 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 SLC35B1P78383 322 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 BEAN1Q3B7T3 259 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 Q3ZCU0 254 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 PLAC9Q5JTB6 97 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 ODF3L1Q8IXM7 274 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 SPARTQ8N0X7 666 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 Q8N6K4 173 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 OR56B1Q8NGI3 324 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 ABHD5Q8WTS1 349 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 CHPT1Q8WUD6 406 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 PHF21AQ96BD5 680 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 S1PR3Q99500 378 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 NABP2Q9BQ15 211 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 ZNF251Q9BRH9 671 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 PARP11Q9NR21 331 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 LIN7CQ9NUP9 197 aaKnown RBP7.71□□□□□ -1.18
CCDC58-201ENST00000291458 RNF150Q9ULK6 438 aa7.71□□□□□ -1.18
CCDC58-201ENST00000291458 RRP15Q9Y3B9 282 aaKnown RBP7.71□□□□□ -1.18
CCDC58-201ENST00000291458 LOC100506127A0A0U1RQW1 187 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 TRDV1A0A1B0GX56 115 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 FOXI3A8MTJ6 420 aaPredicted RBP7.7□□□□□ -1.18
CCDC58-201ENST00000291458 H7C2Y5 167 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 AP4M1O00189 453 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 BET1O15155 118 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 YPEL1O60688 119 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 IGHG2P01859 326 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 SOX6P35712 828 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 CEACAM6P40199 344 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 ZNF137PP52743 207 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 TMEM50BP56557 158 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 ACTBP60709 375 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 RPL23AP62750 156 aaKnown RBP7.7□□□□□ -1.18
CCDC58-201ENST00000291458 HTD2P86397 168 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 MXD1Q05195 221 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 EBI3Q14213 229 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 PLGLAQ15195 96 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 DEFB136Q30KP8 78 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 UBE2UQ5VVX9 321 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 STEAP3Q658P3 488 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 ZNF880Q6PDB4 577 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 NR2C2APQ86WQ0 139 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 DRAXINQ8NBI3 349 aaPredicted RBP7.7□□□□□ -1.18
CCDC58-201ENST00000291458 RAB3CQ96E17 227 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 RITA1Q96K30 269 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 YPEL2Q96QA6 119 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 CHCHD6Q9BRQ6 235 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 ATG5Q9H1Y0 275 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 ABCG5Q9H222 651 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 OR51E2Q9H255 320 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 RNF167Q9H6Y7 350 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 Q9N2K0 584 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 TXNL4BQ9NX01 149 aaKnown RBP7.7□□□□□ -1.18
CCDC58-201ENST00000291458 ZNF230Q9UIE0 474 aaPredicted RBP7.7□□□□□ -1.18
CCDC58-201ENST00000291458 ZNF107Q9UII5 783 aaPredicted RBP7.7□□□□□ -1.18
CCDC58-201ENST00000291458 RAB22AQ9UL26 194 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 WSB1Q9Y6I7 421 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 A3GALT2U3KPV4 340 aa7.7□□□□□ -1.18
CCDC58-201ENST00000291458 VWFP04275 2813 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 TRAV1-2A0A0B4J238 106 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 IGKV1-6A0A0C4DH72 117 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 IFITM5A6NNB3 132 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 J3QRK9 145 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 LDLRAD4O15165 306 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 NBR2O15453 112 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 FCGR3AP08637 254 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 CLEC2LP0C7M8 214 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 VDAC1P21796 283 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 GADD45AP24522 165 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 ARFRP1Q13795 201 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 ECSCRQ19T08 205 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 ZNF773Q6PK81 442 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 ZNF833PQ6ZTB9 187 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 ZNF554Q86TJ5 538 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 FAM89BQ8N5H3 189 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 FAM71E2Q8N5Q1 922 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 OR10R2Q8NGX6 335 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 LGALS14Q8TCE9 139 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 FCGR1BQ92637 280 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 CLCC1Q96S66 551 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 C11orf54Q9H0W9 315 aaPredicted RBP7.69□□□□□ -1.18
CCDC58-201ENST00000291458 RIMS4Q9H426 269 aaPredicted RBP7.69□□□□□ -1.18
CCDC58-201ENST00000291458 PLSCR3Q9NRY6 295 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 KIAA1456Q9P272 454 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 DAPK2Q9UIK4 370 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 ELF5Q9UKW6 265 aaPredicted RBP7.69□□□□□ -1.18
CCDC58-201ENST00000291458 HSF4Q9ULV5 492 aa7.69□□□□□ -1.18
CCDC58-201ENST00000291458 STUB1Q9UNE7 303 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms