RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 CBLN4Q9NTU7 201 aa18.26■□□□□ 0.51
CCDC7-201ENST00000277657 PSG11Q9UQ72 335 aa18.26■□□□□ 0.51
CCDC7-201ENST00000277657 ZNF729A6NN14 1252 aaPredicted RBP18.25■□□□□ 0.51
CCDC7-201ENST00000277657 BCL2L11O43521 198 aa18.25■□□□□ 0.51
CCDC7-201ENST00000277657 FSTL3O95633 263 aa18.25■□□□□ 0.51
CCDC7-201ENST00000277657 OMGP23515 440 aa18.25■□□□□ 0.51
CCDC7-201ENST00000277657 ZFP57Q9NU63 452 aa18.25■□□□□ 0.51
CCDC7-201ENST00000277657 LRBAP50851 2863 aa18.25■□□□□ 0.51
CCDC7-201ENST00000277657 CACNA1BQ00975 2339 aa18.25■□□□□ 0.51
CCDC7-201ENST00000277657 K7EPK0 472 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 ITGB1BP1O14713 200 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 ST8SIA5O15466 376 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 IGKV1-39P01597 117 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 RLN2P04090 185 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 IGKV1D-39P04432 117 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 NDUFB7P17568 137 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 HTR2BP41595 481 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 MEF2CQ06413 473 aaPredicted RBP18.24■□□□□ 0.51
CCDC7-201ENST00000277657 LYPD2Q6UXB3 125 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 FOXRED2Q8IWF2 684 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 SLC7A5P1Q8MH63 180 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 FAM71E2Q8N5Q1 922 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 SDHAF2Q9NX18 166 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 LINC00312Q9Y6C7 94 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 KANTRA0A1W2PQU2 76 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 hADV38S2A0JD32 116 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 MSGN1A6NI15 193 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 ADAM20O43506 726 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 NDUFA2O43678 99 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 IGFBP2P18065 325 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 SMCO1Q147U7 214 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 ABHD14BQ96IU4 210 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 GFOD1Q9NXC2 390 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 UBQLN2Q9UHD9 624 aa18.24■□□□□ 0.51
CCDC7-201ENST00000277657 LSM5Q9Y4Y9 91 aaKnown RBP18.24■□□□□ 0.51
CCDC7-201ENST00000277657 SCGB1D2O95969 90 aa18.23■□□□□ 0.51
CCDC7-201ENST00000277657 RPL30P62888 115 aaKnown RBP18.23■□□□□ 0.51
CCDC7-201ENST00000277657 TMEM30BQ3MIR4 351 aa18.23■□□□□ 0.51
CCDC7-201ENST00000277657 TAS2R3Q9NYW6 316 aa18.23■□□□□ 0.51
CCDC7-201ENST00000277657 CTSZQ9UBR2 303 aa18.23■□□□□ 0.51
CCDC7-201ENST00000277657 C19orf84I3L1E1 186 aa18.22■□□□□ 0.51
CCDC7-201ENST00000277657 DANCRP0C864 163 aa18.22■□□□□ 0.51
CCDC7-201ENST00000277657 SLC25A6P12236 298 aa18.22■□□□□ 0.51
CCDC7-201ENST00000277657 ZNF16P17020 682 aaPredicted RBP18.22■□□□□ 0.51
CCDC7-201ENST00000277657 COL8A2P25067 703 aa18.22■□□□□ 0.51
CCDC7-201ENST00000277657 NUP62P37198 522 aaPredicted RBP18.22■□□□□ 0.51
CCDC7-201ENST00000277657 ZNF134P52741 427 aa18.22■□□□□ 0.51
CCDC7-201ENST00000277657 ZNF66Q6ZN08 573 aa18.22■□□□□ 0.51
CCDC7-201ENST00000277657 LSM10Q969L4 123 aaKnown RBP18.22■□□□□ 0.51
CCDC7-201ENST00000277657 FAM212BQ9NTI7 297 aaPredicted RBP18.22■□□□□ 0.51
CCDC7-201ENST00000277657 POMT1Q9Y6A1 747 aa18.22■□□□□ 0.51
CCDC7-201ENST00000277657 ST8SIA3O43173 380 aa18.22■□□□□ 0.51
CCDC7-201ENST00000277657 NDUFB3O43676 98 aa18.22■□□□□ 0.51
CCDC7-201ENST00000277657 CATR1Q13166 79 aa18.22■□□□□ 0.51
CCDC7-201ENST00000277657 LRRC10Q5BKY1 277 aa18.22■□□□□ 0.51
CCDC7-201ENST00000277657 DTX2Q86UW9 622 aa18.22■□□□□ 0.51
CCDC7-201ENST00000277657 RAB1BQ9H0U4 201 aa18.22■□□□□ 0.51
CCDC7-201ENST00000277657 C19orf12Q9NSK7 152 aa18.22■□□□□ 0.51
CCDC7-201ENST00000277657 IDI2-AS1Q9NZ38 188 aa18.22■□□□□ 0.51
CCDC7-201ENST00000277657 USF3Q68DE3 2245 aa18.22■□□□□ 0.51
CCDC7-201ENST00000277657 A0A0G2JRQ6 117 aa18.21■□□□□ 0.51
CCDC7-201ENST00000277657 A0A1W2PPR1 153 aa18.21■□□□□ 0.51
CCDC7-201ENST00000277657 SOD3P08294 240 aa18.21■□□□□ 0.51
CCDC7-201ENST00000277657 RPL31P62899 125 aaKnown RBP18.21■□□□□ 0.51
CCDC7-201ENST00000277657 THOC7Q6I9Y2 204 aaKnown RBP18.21■□□□□ 0.51
CCDC7-201ENST00000277657 TCTEX1D1Q8N7M0 179 aa18.21■□□□□ 0.51
CCDC7-201ENST00000277657 HSD17B10Q99714 261 aaKnown RBP18.21■□□□□ 0.51
CCDC7-201ENST00000277657 ARPC5LQ9BPX5 153 aa18.21■□□□□ 0.51
CCDC7-201ENST00000277657 IFI27L2Q9H2X8 130 aa18.21■□□□□ 0.51
CCDC7-201ENST00000277657 A0A1B0GU03 582 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 E5RGE8 158 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 LYNX1G3V0Z9 82 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 PROP1O75360 226 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 LYNX1P0DP58 116 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 HKR1P10072 659 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 GPR12P47775 334 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 UBA52P62987 128 aaKnown RBP18.2■□□□□ 0.5
CCDC7-201ENST00000277657 Q3ZCU0 254 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 UTF1Q5T230 341 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 BTNL3Q6UXE8 466 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 GPR146Q96CH1 333 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 NSG2Q9Y328 171 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 DVL1O14640 695 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 PITX3O75364 302 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 CLDN1O95832 211 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 IGKV1-5P01602 117 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 NKX2-1P43699 371 aaPredicted RBP18.2■□□□□ 0.5
CCDC7-201ENST00000277657 BRWD1-AS2P59051 145 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 ZNF273Q14593 569 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 OR8H3Q8N146 312 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 OR10A7Q8NGE5 316 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 LPAR3Q9UBY5 353 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 GAB2Q9UQC2 676 aa18.2■□□□□ 0.5
CCDC7-201ENST00000277657 RCL1Q9Y2P8 373 aaKnown RBP18.2■□□□□ 0.5
CCDC7-201ENST00000277657 SPDEFO95238 335 aa18.19■□□□□ 0.5
CCDC7-201ENST00000277657 RAB7AP51149 207 aa18.19■□□□□ 0.5
CCDC7-201ENST00000277657 ZNF439Q8NDP4 499 aa18.19■□□□□ 0.5
CCDC7-201ENST00000277657 DMBX1Q8NFW5 382 aa18.19■□□□□ 0.5
CCDC7-201ENST00000277657 ST8SIA2Q92186 375 aa18.19■□□□□ 0.5
CCDC7-201ENST00000277657 ABHD14AQ9BUJ0 271 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms