RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 OR52N5Q8NH56 324 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 SCGB1C1Q8TD33 95 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 TAAR6Q96RI8 345 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 PLEK2Q9NYT0 353 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 SS18L2Q9UHA2 77 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.86□□□□□ -1.15
PDGFC-201ENST00000274071 TNFP01375 233 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 ASAH2BP0C7U1 165 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 LINC00869P0C866 280 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 EGR1P18146 543 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 FBLP22087 321 aaKnown RBP7.86□□□□□ -1.15
PDGFC-201ENST00000274071 CCNOP22674 350 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 CA7P43166 264 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 ZNF90Q03938 601 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 GPER1Q99527 375 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 HDHD3Q9BSH5 251 aaPredicted RBP7.86□□□□□ -1.15
PDGFC-201ENST00000274071 ANXA10Q9UJ72 324 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 A0A0G2JMM0 328 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 A0A1W2PPB8 328 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 FOXI3A8MTJ6 420 aaPredicted RBP7.86□□□□□ -1.15
PDGFC-201ENST00000274071 KIR3DP1A8MWS1 328 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 SNURFLB1AK76 121 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 H3BP45 60 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 KLRC4-KLRK1H3BQV0 150 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 SLC16A7O60669 478 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 IGKV1D-33P01593 117 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 IGKV1-33P01594 117 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 NTF3P20783 257 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 SRD5A2P31213 254 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 SERF2P84101 59 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 ID3Q02535 119 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 FHL5Q5TD97 284 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 TSKUQ8WUA8 353 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 MRAP2Q96G30 205 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 MMP25Q9NPA2 562 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 TEX48A0A1B0GUV7 120 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 LATO43561 262 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 CISD3P0C7P0 127 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 ADH5P11766 374 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 GATA3P23771 443 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 NTSR1P30989 418 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 RHOBP62745 196 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 OR10J3Q5JRS4 329 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 NEIL1Q96FI4 390 aaPredicted RBP7.85□□□□□ -1.15
PDGFC-201ENST00000274071 FER1L6-AS2Q96M78 137 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 PSMG3Q9BT73 122 aaPredicted RBP7.85□□□□□ -1.15
PDGFC-201ENST00000274071 MOB1AQ9H8S9 216 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 TSSC4Q9Y5U2 329 aaPredicted RBP7.85□□□□□ -1.15
PDGFC-201ENST00000274071 SPTBN5Q9NRC6 3674 aaKnown RBP7.85□□□□□ -1.15
PDGFC-201ENST00000274071 A0A1W2PR80 420 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 ZNF850A8MQ14 1090 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 TMPRSS2O15393 492 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 SLC31A1O15431 190 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 PAGE4O60829 102 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 LIPFP07098 398 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 HNRNPA2B1P22626 353 aaKnown RBP7.85□□□□□ -1.15
PDGFC-201ENST00000274071 NPY1RP25929 384 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 RPL24P83731 157 aaKnown RBP7.85□□□□□ -1.15
PDGFC-201ENST00000274071 MEF2CQ06413 473 aaPredicted RBP7.85□□□□□ -1.15
PDGFC-201ENST00000274071 ZNF324BQ6AW86 544 aaPredicted RBP7.85□□□□□ -1.15
PDGFC-201ENST00000274071 ZNF841Q6ZN19 808 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 OR5A2Q8NGI9 324 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 CT55Q8WUE5 264 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 JMJD8Q96S16 334 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 HIF1ANQ9NWT6 349 aa7.85□□□□□ -1.15
PDGFC-201ENST00000274071 K7EP34 96 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 ADAM20O43506 726 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 CA3P07451 260 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 CTLA4P16410 223 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 TGFBR3Q03167 851 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 PRDX1Q06830 199 aaKnown RBP7.84□□□□□ -1.15
PDGFC-201ENST00000274071 GABRA6Q16445 453 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 ACKR1Q16570 336 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 HNRNPA1L2Q32P51 320 aaKnown RBP7.84□□□□□ -1.15
PDGFC-201ENST00000274071 DMRTC1Q5HYR2 192 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 EBLN2Q6P2I7 272 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 C6orf201Q7Z4U5 140 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.84□□□□□ -1.15
PDGFC-201ENST00000274071 OR5AS1Q8N127 324 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 TSTD1Q8NFU3 115 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 OR4N2Q8NGD1 307 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 BLNKQ8WV28 456 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 NINJ1Q92982 152 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 EYSQ5T1H1 3165 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 FREM3P0C091 2139 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 MPPED1O15442 326 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 IGKV1D-16P01601 117 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 EGR4Q05215 589 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 GPM6BQ13491 265 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 LTC4SQ16873 150 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 SPATA31B1PQ5VZV4 182 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 C1QL2Q7Z5L3 287 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 UEVLDQ8IX04 471 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 PERPQ96FX8 193 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 SFXN3Q9BWM7 321 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 ST20Q9HBF5 79 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 SLC7A10Q9NS82 523 aa7.84□□□□□ -1.15
PDGFC-201ENST00000274071 SHANK1Q9Y566 2161 aa7.84□□□□□ -1.16
PDGFC-201ENST00000274071 A0A087X0K7 114 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 IGLV1-36A0A0B4J1U3 117 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms