RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 C5orf30Q96GV9 206 aa10.48□□□□□ -0.73
BEST3-201ENST00000266661 RCC1LQ96I51 464 aaKnown RBP10.48□□□□□ -0.73
BEST3-201ENST00000266661 NIPSNAP3BQ9BS92 247 aa10.48□□□□□ -0.73
BEST3-201ENST00000266661 WDR61Q9GZS3 305 aaKnown RBP10.48□□□□□ -0.73
BEST3-201ENST00000266661 OR51B6Q9H340 312 aa10.48□□□□□ -0.73
BEST3-201ENST00000266661 TMPRSS5Q9H3S3 457 aa10.48□□□□□ -0.73
BEST3-201ENST00000266661 C12orf49Q9H741 205 aa10.48□□□□□ -0.73
BEST3-201ENST00000266661 RNF150Q9ULK6 438 aa10.48□□□□□ -0.73
BEST3-201ENST00000266661 MED13Q9UHV7 2174 aa10.48□□□□□ -0.73
BEST3-201ENST00000266661 FABP1P07148 127 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 CELA3BP08861 270 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 IAPPP10997 89 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 RPS10P46783 165 aaKnown RBP10.47□□□□□ -0.73
BEST3-201ENST00000266661 UNQ6494/PRO21346Q6UXR6 183 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 OR4C12Q96R67 309 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 ZNF665Q9H7R5 613 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 NIT2Q9NQR4 276 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 LIN7CQ9NUP9 197 aaKnown RBP10.47□□□□□ -0.73
BEST3-201ENST00000266661 TMEM242Q9NWH2 141 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 POLDIP2Q9Y2S7 368 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 RAXQ9Y2V3 346 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 IQCF6A8MYZ5 107 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 KLRC4-KLRK1H3BQV0 150 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 PHOX2AO14813 284 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 CDX1P47902 265 aaPredicted RBP10.47□□□□□ -0.73
BEST3-201ENST00000266661 PPP1CBP62140 327 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 KIAA0141Q14154 515 aaPredicted RBP10.47□□□□□ -0.73
BEST3-201ENST00000266661 NCMAPQ5T1S8 102 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 ZNF787Q6DD87 383 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 P4HA3Q7Z4N8 544 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 FGFRL1Q8N441 504 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 EDARADDQ8WWZ3 215 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 P2RX4Q99571 388 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 GNG13Q9P2W3 67 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 TRAPPC2LQ9UL33 140 aa10.47□□□□□ -0.73
BEST3-201ENST00000266661 PTPRQQ9UMZ3 2332 aa10.46□□□□□ -0.73
BEST3-201ENST00000266661 SPENQ96T58 3664 aaKnown RBP10.46□□□□□ -0.73
BEST3-201ENST00000266661 ESPL1Q14674 2120 aa10.46□□□□□ -0.73
BEST3-201ENST00000266661 TGIF2-C20orf24A0A0A6YYL0 155 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 RAC2P15153 192 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 WT1P19544 449 aaPredicted RBP10.46□□□□□ -0.74
BEST3-201ENST00000266661 CEACAM6P40199 344 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 BRWD1-AS2P59051 145 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 ERVS71-1P61550 626 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 TBC1D28Q2M2D7 210 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.46□□□□□ -0.74
BEST3-201ENST00000266661 C11orf53Q8IXP5 236 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 OR13D1Q8NGV5 346 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 SCGB1C1Q8TD33 95 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 OR2J1Q9GZK6 312 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 ZDHHC11Q9H8X9 412 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 SDF2L1Q9HCN8 221 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 DOK5Q9P104 306 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 HSPB7Q9UBY9 170 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 TIMM9Q9Y5J7 89 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 MED12LQ86YW9 2145 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 USP24Q9UPU5 2620 aa10.46□□□□□ -0.74
BEST3-201ENST00000266661 BSNQ9UPA5 3926 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 PMS2P5A8MQ11 134 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 CDIPTO14735 213 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 SH2D1BO14796 132 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 PSPNO60542 156 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 WISP2O76076 250 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 IGHV2-70P01814 119 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 CEBPGP53567 150 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 HBG1P69891 147 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 HBG2P69892 147 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 PNRC1Q12796 327 aaPredicted RBP10.45□□□□□ -0.74
BEST3-201ENST00000266661 GABRA6Q16445 453 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 TMEM41BQ5BJD5 291 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 ZNF610Q8N9Z0 462 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 ZBTB34Q8NCN2 500 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 UBALD1Q8TB05 177 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 TAF15Q92804 592 aaKnown RBP eCLIP10.45□□□□□ -0.74
BEST3-201ENST00000266661 DEFB127Q9H1M4 99 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 ITPR1Q14643 2758 aa10.45□□□□□ -0.74
BEST3-201ENST00000266661 KLK10O43240 276 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 YIF1AO95070 293 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 IGKV1D-33P01593 117 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 IGKV1-33P01594 117 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 IGHV1-2P23083 117 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 RPL30P62888 115 aaKnown RBP10.44□□□□□ -0.74
BEST3-201ENST00000266661 TNFRSF9Q07011 255 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 PSG7Q13046 419 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 GUSBP1Q15486 140 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 MSMO1Q15800 293 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 IGF2-ASQ6U949 168 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 LCN15Q6UWW0 184 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 MRGPRGQ86SM5 289 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 ZNF645Q8N7E2 425 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 RNASE11Q8TAA1 199 aaKnown RBP10.44□□□□□ -0.74
BEST3-201ENST00000266661 SLC25A40Q8TBP6 338 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 PINX1Q96BK5 328 aaKnown RBP10.44□□□□□ -0.74
BEST3-201ENST00000266661 RBKSQ9H477 322 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 MIOXQ9UGB7 285 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 VAX2Q9UIW0 290 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 SMG1Q96Q15 3661 aaKnown RBP10.44□□□□□ -0.74
BEST3-201ENST00000266661 TRGV5A0A0B4J1U4 118 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 TMEM210A6NLX4 147 aa10.44□□□□□ -0.74
BEST3-201ENST00000266661 HIST1H2BKO60814 126 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms