RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 SFXN3Q9BWM7 321 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 RNF150Q9ULK6 438 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 PPP1R3CQ9UQK1 317 aa9.31□□□□□ -0.92
MSH3-201ENST00000265081 RAMP3O60896 148 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 SRP19P09132 144 aaKnown RBP9.3□□□□□ -0.92
MSH3-201ENST00000265081 EGR1P18146 543 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 C1orf185Q5T7R7 199 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 OR13A1Q8NGR1 328 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 Q8TCH9 128 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 A0A087WWC5 75 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 LOXL3P58215 753 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 UBE2KP61086 200 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 SERF2P84101 59 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 ZNF726P1Q15940 193 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 TIMM8AO60220 97 aaPredicted RBP9.3□□□□□ -0.92
MSH3-201ENST00000265081 CST7O76096 145 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 AESQ08117 197 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 ZNF616Q08AN1 781 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 OR52L2PQ8NGH6 319 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 FAM213BQ8TBF2 198 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 KCNJ16Q9NPI9 418 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 JPT1Q9UK76 154 aa9.3□□□□□ -0.92
MSH3-201ENST00000265081 DMXL1Q9Y485 3027 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 LRRC30A6NM36 301 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 YPEL1O60688 119 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 GLRXP35754 106 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 AWAT1Q58HT5 328 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 YPEL2Q96QA6 119 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 HSD17B10Q99714 261 aaKnown RBP9.29□□□□□ -0.92
MSH3-201ENST00000265081 WDR61Q9GZS3 305 aaKnown RBP9.29□□□□□ -0.92
MSH3-201ENST00000265081 OR2D2Q9H210 308 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 GPR179Q6PRD1 2367 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 AGPAT2O15120 278 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 PROP1O75360 226 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 AGAP20933 346 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 KRBOX4Q5JUW0 171 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 GCSAMQ8N6F7 178 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 NUP37Q8NFH4 326 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 SNX22Q96L94 193 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 RBKSQ9H477 322 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 PSENENQ9NZ42 101 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 LAMP3Q9UQV4 416 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 LOC102723971A0A1B0GUV8 181 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 RBFOX2O43251 390 aaKnown RBP eCLIP9.29□□□□□ -0.92
MSH3-201ENST00000265081 SCAF4O95104 1147 aaKnown RBP9.29□□□□□ -0.92
MSH3-201ENST00000265081 HBE1P02100 147 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 TLE4Q04727 773 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 KHDC3LQ587J8 217 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 DDB2Q92466 427 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 HIST1H2BAQ96A08 127 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 RARRES2Q99969 163 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 JKAMPQ9P055 326 aa9.29□□□□□ -0.92
MSH3-201ENST00000265081 GCH1P30793 250 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 PRDX2P32119 198 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 GLIPR1P48060 266 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 RAB13P51153 203 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 TDGF1P3P51864 188 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 RUNX1Q01196 453 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 IZUMO4Q1ZYL8 232 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 CISD1Q9NZ45 108 aaKnown RBP9.28□□□□□ -0.92
MSH3-201ENST00000265081 OR14J1Q9UGF5 321 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 C7orf77A4D0Y5 90 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 LINC00473A8K010 186 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 H7C2Y5 167 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 ARG1P05089 322 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 PPT1P50897 306 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 HOXA4Q00056 320 aaPredicted RBP9.28□□□□□ -0.92
MSH3-201ENST00000265081 TMEM267Q0VDI3 215 aaPredicted RBP9.28□□□□□ -0.92
MSH3-201ENST00000265081 C1QL4Q86Z23 238 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 Q8N7P7 452 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 S100PBPQ96BU1 408 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 OR4C12Q96R67 309 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 LY86O95711 162 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 HABP2Q14520 560 aaPredicted RBP9.28□□□□□ -0.92
MSH3-201ENST00000265081 ATP6V1FQ16864 119 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 KRTCAP3Q53RY4 240 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 AVPI1Q5T686 147 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 FAM57AQ8TBR7 257 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 MEGF10Q96KG7 1140 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 DIRC2Q96SL1 478 aa9.28□□□□□ -0.92
MSH3-201ENST00000265081 ODAMA1E959 279 aa9.27□□□□□ -0.92
MSH3-201ENST00000265081 C17orf98A8MV24 154 aa9.27□□□□□ -0.92
MSH3-201ENST00000265081 CRYBA1P05813 215 aa9.27□□□□□ -0.92
MSH3-201ENST00000265081 OMGP23515 440 aa9.27□□□□□ -0.92
MSH3-201ENST00000265081 HOXA1P49639 335 aaPredicted RBP9.27□□□□□ -0.92
MSH3-201ENST00000265081 FAM53AQ6NSI3 398 aaPredicted RBP9.27□□□□□ -0.92
MSH3-201ENST00000265081 ETV3LQ6ZN32 361 aa9.27□□□□□ -0.92
MSH3-201ENST00000265081 SSX7Q7RTT5 188 aa9.27□□□□□ -0.92
MSH3-201ENST00000265081 OR52E5Q8NH55 327 aa9.27□□□□□ -0.92
MSH3-201ENST00000265081 LRRC29Q8WV35 223 aa9.27□□□□□ -0.92
MSH3-201ENST00000265081 SDSLQ96GA7 329 aa9.27□□□□□ -0.92
MSH3-201ENST00000265081 MSL2Q9HCI7 577 aa9.27□□□□□ -0.92
MSH3-201ENST00000265081 GNB2P62879 340 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 HBG1P69891 147 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 HBG2P69892 147 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 CATR1Q13166 79 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 MORN2Q502X0 79 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 SPRNQ5BIV9 151 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 LRP11Q86VZ4 500 aa9.27□□□□□ -0.93
MSH3-201ENST00000265081 CLCC1Q96S66 551 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms