RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 IDH3GP51553 393 aaPredicted RBP12.83□□□□□ -0.36
DDX56-201ENST00000258772 ZNF766Q5HY98 468 aa12.83□□□□□ -0.36
DDX56-201ENST00000258772 TMEM14EPQ6UXP3 125 aa12.83□□□□□ -0.36
DDX56-201ENST00000258772 SLC25A40Q8TBP6 338 aa12.83□□□□□ -0.36
DDX56-201ENST00000258772 TAF15Q92804 592 aaKnown RBP eCLIP12.83□□□□□ -0.36
DDX56-201ENST00000258772 PINX1Q96BK5 328 aaKnown RBP12.83□□□□□ -0.36
DDX56-201ENST00000258772 P2RX4Q99571 388 aa12.83□□□□□ -0.36
DDX56-201ENST00000258772 TMEM242Q9NWH2 141 aa12.83□□□□□ -0.36
DDX56-201ENST00000258772 IFITM10A6NMD0 228 aa12.83□□□□□ -0.36
DDX56-201ENST00000258772 PSPNO60542 156 aa12.83□□□□□ -0.36
DDX56-201ENST00000258772 CD59P13987 128 aa12.83□□□□□ -0.36
DDX56-201ENST00000258772 SELEP16581 610 aa12.83□□□□□ -0.36
DDX56-201ENST00000258772 CEBPDP49716 269 aaPredicted RBP12.83□□□□□ -0.36
DDX56-201ENST00000258772 SLC38A11Q08AI6 406 aa12.83□□□□□ -0.36
DDX56-201ENST00000258772 PSG7Q13046 419 aa12.83□□□□□ -0.36
DDX56-201ENST00000258772 MRGPRGQ86SM5 289 aa12.83□□□□□ -0.36
DDX56-201ENST00000258772 SDF2L1Q9HCN8 221 aa12.83□□□□□ -0.36
DDX56-201ENST00000258772 KCNIP1Q9NZI2 227 aa12.83□□□□□ -0.36
DDX56-201ENST00000258772 VAX2Q9UIW0 290 aa12.83□□□□□ -0.36
DDX56-201ENST00000258772 FRYQ5TBA9 3013 aa12.83□□□□□ -0.36
DDX56-201ENST00000258772 IQCF6A8MYZ5 107 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 HIST1H2BKO60814 126 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 RAMP3O60896 148 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 HAND1O96004 215 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 HIST1H2BJP06899 126 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 HIST1H2BOP23527 126 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 HIST1H2BBP33778 126 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 HIST1H2BDP58876 126 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 BPIFB3P59826 476 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 UBE2NP61088 152 aaKnown RBP12.82□□□□□ -0.36
DDX56-201ENST00000258772 HIST1H2BCP62807 126 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 TNFRSF9Q07011 255 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 HIST2H2BEQ16778 126 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.82□□□□□ -0.36
DDX56-201ENST00000258772 ZNF645Q8N7E2 425 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 ZBTB34Q8NCN2 500 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 OR1L1Q8NH94 360 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 HIST1H2BHQ93079 126 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 HIST1H2BNQ99877 126 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 HIST1H2BMQ99879 126 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 GGACTQ9BVM4 153 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 RBKSQ9H477 322 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 MAP1LC3B2A6NCE7 125 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 CLDN1O95832 211 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 TRGC2P03986 189 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 IGHV1-2P23083 117 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 RND2P52198 227 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 ELLP55199 621 aaPredicted RBP12.82□□□□□ -0.36
DDX56-201ENST00000258772 GABRA6Q16445 453 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 OR8G2PQ6IF36 304 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 GALMQ96C23 342 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 GMPPAQ96IJ6 420 aaPredicted RBP12.82□□□□□ -0.36
DDX56-201ENST00000258772 MAP1LC3BQ9GZQ8 125 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 HSPB7Q9UBY9 170 aa12.82□□□□□ -0.36
DDX56-201ENST00000258772 NCOR1O75376 2440 aa12.81□□□□□ -0.36
DDX56-201ENST00000258772 UBE2L5PA0A1B0GUS4 154 aa12.81□□□□□ -0.36
DDX56-201ENST00000258772 CEBPZOSA8MTT3 80 aa12.81□□□□□ -0.36
DDX56-201ENST00000258772 CLDN34H7C241 214 aa12.81□□□□□ -0.36
DDX56-201ENST00000258772 CYB5R3P00387 301 aaPredicted RBP12.81□□□□□ -0.36
DDX56-201ENST00000258772 KRASP01116 189 aa12.81□□□□□ -0.36
DDX56-201ENST00000258772 OR3A1P47881 315 aa12.81□□□□□ -0.36
DDX56-201ENST00000258772 TGFBR3Q03167 851 aa12.81□□□□□ -0.36
DDX56-201ENST00000258772 OR13D1Q8NGV5 346 aa12.81□□□□□ -0.36
DDX56-201ENST00000258772 HES4Q9HCC6 221 aa12.81□□□□□ -0.36
DDX56-201ENST00000258772 SLC39A9Q9NUM3 307 aa12.81□□□□□ -0.36
DDX56-201ENST00000258772 TMEM30CPA0ZSE6 113 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 TMEM210A6NLX4 147 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 C12orf77C9JDV5 145 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 RPL30P62888 115 aaKnown RBP12.8□□□□□ -0.36
DDX56-201ENST00000258772 PMS2P11Q13670 270 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 ATP1A1-AS1Q5TC04 95 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 SPNS3Q6ZMD2 512 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 BEND4Q6ZU67 534 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 RPP25LQ8N5L8 163 aaKnown RBP12.8□□□□□ -0.36
DDX56-201ENST00000258772 EDARADDQ8WWZ3 215 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 FAM210BQ96KR6 192 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 OR2D2Q9H210 308 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 ZDHHC11Q9H8X9 412 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 TIMM9Q9Y5J7 89 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 ZNF737O75373 536 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 LYZL6O75951 148 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 TNFSF15O95150 251 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 IFNA1P01562 189 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 IGKV1D-33P01593 117 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 IGKV1-33P01594 117 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 IGHV2-70P01814 119 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 P0C879 139 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 G6PCP35575 357 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 EIF4EBP1Q13541 118 aaPredicted RBP12.8□□□□□ -0.36
DDX56-201ENST00000258772 MSMO1Q15800 293 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 FAM53AQ6NSI3 398 aaPredicted RBP12.8□□□□□ -0.36
DDX56-201ENST00000258772 FAM180AQ6UWF9 173 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 CENPVQ7Z7K6 275 aaPredicted RBP12.8□□□□□ -0.36
DDX56-201ENST00000258772 LHX4Q969G2 390 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 C5orf30Q96GV9 206 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 GAR1Q9NY12 217 aaKnown RBP12.8□□□□□ -0.36
DDX56-201ENST00000258772 TINAGQ9UJW2 476 aa12.8□□□□□ -0.36
DDX56-201ENST00000258772 C1QTNF9BB2RNN3 333 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 CD55P08174 381 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 IL2RGP31785 369 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms