RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 BARX1Q9HBU1 254 aaPredicted RBP13.26□□□□□ -0.29
RFX1-201ENST00000254325 BTBD17A6NE02 478 aa13.26□□□□□ -0.29
RFX1-201ENST00000254325 NKX6-3A6NJ46 265 aa13.26□□□□□ -0.29
RFX1-201ENST00000254325 WISP2O76076 250 aa13.26□□□□□ -0.29
RFX1-201ENST00000254325 ZNF146Q15072 292 aa13.26□□□□□ -0.29
RFX1-201ENST00000254325 WDR82Q6UXN9 313 aa13.26□□□□□ -0.29
RFX1-201ENST00000254325 SDSLQ96GA7 329 aa13.26□□□□□ -0.29
RFX1-201ENST00000254325 NIPSNAP3BQ9BS92 247 aa13.26□□□□□ -0.29
RFX1-201ENST00000254325 NDRG3Q9UGV2 375 aa13.26□□□□□ -0.29
RFX1-201ENST00000254325 TRGV10A0A0A0MS01 117 aa13.26□□□□□ -0.29
RFX1-201ENST00000254325 PTAFRP25105 342 aa13.26□□□□□ -0.29
RFX1-201ENST00000254325 HOXA1P49639 335 aaPredicted RBP13.26□□□□□ -0.29
RFX1-201ENST00000254325 ZNF674Q2M3X9 581 aa13.26□□□□□ -0.29
RFX1-201ENST00000254325 H1FXQ92522 213 aaKnown RBP13.26□□□□□ -0.29
RFX1-201ENST00000254325 CIB3Q96Q77 187 aaPredicted RBP13.26□□□□□ -0.29
RFX1-201ENST00000254325 HIPK2Q9H2X6 1198 aa13.26□□□□□ -0.29
RFX1-201ENST00000254325 KRTCAP3Q53RY4 240 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 TIMM23BQ5SRD1 257 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 DCTN5Q9BTE1 182 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 APC2O95996 2303 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 INTS1Q8N201 2190 aaKnown RBP13.25□□□□□ -0.29
RFX1-201ENST00000254325 MLNRO43193 412 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 PTBP3O95758 552 aaKnown RBP13.25□□□□□ -0.29
RFX1-201ENST00000254325 SPP1P10451 314 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 CABLES2Q9BTV7 478 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 EGLN1Q9GZT9 426 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 ADH4P08319 380 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 FAM27E3Q08E93 113 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 GTF3C1Q12789 2109 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 PCSK4Q6UW60 755 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 MED12LQ86YW9 2145 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 LHX4Q969G2 390 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 USB1Q9BQ65 265 aaKnown RBP13.25□□□□□ -0.29
RFX1-201ENST00000254325 TRBV6-6A0A0A6YYG2 114 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 RBFOX3A6NFN3 312 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 TAGLN2P37802 199 aaKnown RBP13.25□□□□□ -0.29
RFX1-201ENST00000254325 C2CD4CQ8TF44 421 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 LSM10Q969L4 123 aaKnown RBP13.25□□□□□ -0.29
RFX1-201ENST00000254325 OR6C3Q9NZP0 311 aa13.25□□□□□ -0.29
RFX1-201ENST00000254325 ZMAT5Q9UDW3 170 aaKnown RBP13.25□□□□□ -0.29
RFX1-201ENST00000254325 MGST3O14880 152 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 IGKV3-15P01624 115 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 ID3Q02535 119 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 OR13A1Q8NGR1 328 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 GFOD1Q9NXC2 390 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 RNF7Q9UBF6 113 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 CLN8Q9UBY8 286 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 MMP24Q9Y5R2 645 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 SPEGQ15772 3267 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 ODAMA1E959 279 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 FLI1Q01543 452 aaPredicted RBP13.24□□□□□ -0.29
RFX1-201ENST00000254325 TESK1Q15569 626 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 PDLIM3Q53GG5 364 aaPredicted RBP13.24□□□□□ -0.29
RFX1-201ENST00000254325 BTNL8Q6UX41 500 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 RSG1Q9BU20 258 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 WSB1Q9Y6I7 421 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 OR8U8P0C7N1 319 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 SNCAP37840 140 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 TAS2R30P59541 319 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 HOXA4Q00056 320 aaPredicted RBP13.24□□□□□ -0.29
RFX1-201ENST00000254325 R3HDM4Q96D70 268 aa13.24□□□□□ -0.29
RFX1-201ENST00000254325 HSD17B10Q99714 261 aaKnown RBP13.24□□□□□ -0.29
RFX1-201ENST00000254325 FGF7P21781 194 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 GNG10P50151 68 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 AWAT1Q58HT5 328 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 NMSQ5H8A3 153 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 LYG1Q8N1E2 194 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 LILRB1Q8NHL6 650 aaPredicted RBP13.23□□□□□ -0.29
RFX1-201ENST00000254325 TRGV8A0A0C4DH27 118 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 A0A1W2PPV4 95 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 C17orf112F2Z3M2 114 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 C16orf97H3BN30 126 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 DAOP14920 347 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 NUBP1P53384 320 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 LRP11Q86VZ4 500 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 ZNRF1Q8ND25 227 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 DTD1Q8TEA8 209 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 PINX1Q96BK5 328 aaKnown RBP13.23□□□□□ -0.29
RFX1-201ENST00000254325 BIN3Q9NQY0 253 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 S1PR2O95136 353 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 TNFRSF1AP19438 455 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 GLRXP35754 106 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 TP53TG5Q9Y2B4 290 aa13.23□□□□□ -0.29
RFX1-201ENST00000254325 A0A1W2PPE3 182 aa13.22□□□□□ -0.29
RFX1-201ENST00000254325 HMGB3O15347 200 aaKnown RBP13.22□□□□□ -0.29
RFX1-201ENST00000254325 COX5AP20674 150 aa13.22□□□□□ -0.29
RFX1-201ENST00000254325 FGF8P55075 233 aaPredicted RBP13.22□□□□□ -0.29
RFX1-201ENST00000254325 OR2B8PP59922 312 aa13.22□□□□□ -0.29
RFX1-201ENST00000254325 ADAM5Q6NVV9 412 aa13.22□□□□□ -0.29
RFX1-201ENST00000254325 RBMS3Q6XE24 437 aaKnown RBP13.22□□□□□ -0.29
RFX1-201ENST00000254325 OR5T1Q8NG75 326 aa13.22□□□□□ -0.29
RFX1-201ENST00000254325 SFXN3Q9BWM7 321 aa13.22□□□□□ -0.29
RFX1-201ENST00000254325 IFNL4K9M1U5 179 aa13.22□□□□□ -0.29
RFX1-201ENST00000254325 KIAA1549Q9HCM3 1950 aa13.22□□□□□ -0.29
RFX1-201ENST00000254325 DNASE2O00115 360 aaPredicted RBP13.22□□□□□ -0.29
RFX1-201ENST00000254325 FOSL1P15407 271 aa13.22□□□□□ -0.29
RFX1-201ENST00000254325 CCL8P80075 99 aa13.22□□□□□ -0.29
RFX1-201ENST00000254325 FAM201AQ5SY85 155 aa13.22□□□□□ -0.29
RFX1-201ENST00000254325 SNX22Q96L94 193 aa13.22□□□□□ -0.29
RFX1-201ENST00000254325 CARHSP1Q9Y2V2 147 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms