RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 MND1Q9BWT6 205 aa16.42■□□□□ 0.22
NEDD8-201ENST00000250495 TMEM59Q9BXS4 323 aa16.42■□□□□ 0.22
NEDD8-201ENST00000250495 PIPOXQ9P0Z9 390 aa16.42■□□□□ 0.22
NEDD8-201ENST00000250495 VSIG4Q9Y279 399 aa16.42■□□□□ 0.22
NEDD8-201ENST00000250495 LSM4Q9Y4Z0 139 aaKnown RBP16.42■□□□□ 0.22
NEDD8-201ENST00000250495 CCDC160A6NGH7 325 aa16.41■□□□□ 0.22
NEDD8-201ENST00000250495 G3V318 75 aa16.41■□□□□ 0.22
NEDD8-201ENST00000250495 OR8U8P0C7N1 319 aa16.41■□□□□ 0.22
NEDD8-201ENST00000250495 SRMP19623 302 aa16.41■□□□□ 0.22
NEDD8-201ENST00000250495 CNTFRP26992 372 aa16.41■□□□□ 0.22
NEDD8-201ENST00000250495 INSL4Q14641 139 aa16.41■□□□□ 0.22
NEDD8-201ENST00000250495 ZNF260Q3ZCT1 412 aa16.41■□□□□ 0.22
NEDD8-201ENST00000250495 FAM71F2Q6NXP2 309 aa16.41■□□□□ 0.22
NEDD8-201ENST00000250495 C6orf201Q7Z4U5 140 aa16.41■□□□□ 0.22
NEDD8-201ENST00000250495 LRRTM1Q86UE6 522 aa16.41■□□□□ 0.22
NEDD8-201ENST00000250495 SVOPQ8N4V2 548 aa16.41■□□□□ 0.22
NEDD8-201ENST00000250495 OR1N2Q8NGR9 330 aa16.41■□□□□ 0.22
NEDD8-201ENST00000250495 OR13F1Q8NGS4 319 aa16.41■□□□□ 0.22
NEDD8-201ENST00000250495 TM2D1Q9BX74 207 aa16.41■□□□□ 0.22
NEDD8-201ENST00000250495 KLK15Q9H2R5 256 aa16.41■□□□□ 0.22
NEDD8-201ENST00000250495 PARP11Q9NR21 331 aa16.41■□□□□ 0.22
NEDD8-201ENST00000250495 SAA2-SAA4A0A096LPE2 208 aa16.4■□□□□ 0.22
NEDD8-201ENST00000250495 IGHV7-81A0A0B4J1V7 117 aa16.4■□□□□ 0.22
NEDD8-201ENST00000250495 TRAV41A0A0B4J266 112 aa16.4■□□□□ 0.22
NEDD8-201ENST00000250495 RAB29O14966 203 aa16.4■□□□□ 0.22
NEDD8-201ENST00000250495 ATP6V0E1O15342 81 aa16.4■□□□□ 0.22
NEDD8-201ENST00000250495 IGLV1-40P01703 118 aa16.4■□□□□ 0.22
NEDD8-201ENST00000250495 CDK1P06493 297 aa16.4■□□□□ 0.22
NEDD8-201ENST00000250495 SAA2P0DJI9 122 aaPredicted RBP16.4■□□□□ 0.22
NEDD8-201ENST00000250495 HTR2CP28335 458 aa16.4■□□□□ 0.22
NEDD8-201ENST00000250495 RAB9AP51151 201 aa16.4■□□□□ 0.22
NEDD8-201ENST00000250495 INSL3P51460 131 aa16.4■□□□□ 0.22
NEDD8-201ENST00000250495 RUNX1Q01196 453 aa16.4■□□□□ 0.22
NEDD8-201ENST00000250495 KIAA0141Q14154 515 aaPredicted RBP16.4■□□□□ 0.22
NEDD8-201ENST00000250495 FAM27D1Q5T7N8 215 aa16.4■□□□□ 0.22
NEDD8-201ENST00000250495 IL1F10Q8WWZ1 152 aa16.4■□□□□ 0.22
NEDD8-201ENST00000250495 PRR25Q96S07 402 aa16.4■□□□□ 0.22
NEDD8-201ENST00000250495 TMED9Q9BVK6 235 aa16.4■□□□□ 0.22
NEDD8-201ENST00000250495 GHITMQ9H3K2 345 aa16.4■□□□□ 0.22
NEDD8-201ENST00000250495 RIMS4Q9H426 269 aaPredicted RBP16.4■□□□□ 0.22
NEDD8-201ENST00000250495 CHMP1AQ9HD42 196 aaPredicted RBP16.4■□□□□ 0.22
NEDD8-201ENST00000250495 I3L521 148 aa16.39■□□□□ 0.21
NEDD8-201ENST00000250495 NDUFA3O95167 84 aa16.39■□□□□ 0.21
NEDD8-201ENST00000250495 BLVRBP30043 206 aaPredicted RBP16.39■□□□□ 0.21
NEDD8-201ENST00000250495 ZNF616Q08AN1 781 aa16.39■□□□□ 0.21
NEDD8-201ENST00000250495 HSD17B12Q53GQ0 312 aa16.39■□□□□ 0.21
NEDD8-201ENST00000250495 PRSS48Q7RTY5 328 aa16.39■□□□□ 0.21
NEDD8-201ENST00000250495 CEACAM19Q7Z692 300 aa16.39■□□□□ 0.21
NEDD8-201ENST00000250495 IFI27L2Q9H2X8 130 aa16.39■□□□□ 0.21
NEDD8-201ENST00000250495 GNB4Q9HAV0 340 aa16.39■□□□□ 0.21
NEDD8-201ENST00000250495 PLEKHJ1Q9NW61 149 aa16.39■□□□□ 0.21
NEDD8-201ENST00000250495 PTGES3LE9PB15 166 aa16.38■□□□□ 0.21
NEDD8-201ENST00000250495 ST8SIA5O15466 376 aa16.38■□□□□ 0.21
NEDD8-201ENST00000250495 RGS10O43665 173 aa16.38■□□□□ 0.21
NEDD8-201ENST00000250495 BPNT1O95861 308 aa16.38■□□□□ 0.21
NEDD8-201ENST00000250495 NAPSAO96009 420 aa16.38■□□□□ 0.21
NEDD8-201ENST00000250495 CD37P11049 281 aa16.38■□□□□ 0.21
NEDD8-201ENST00000250495 MC5RP33032 325 aa16.38■□□□□ 0.21
NEDD8-201ENST00000250495 SPHARQ15513 63 aa16.38■□□□□ 0.21
NEDD8-201ENST00000250495 NEDD8Q15843 81 aa16.38■□□□□ 0.21
NEDD8-201ENST00000250495 ZNF660Q6AZW8 331 aaPredicted RBP16.38■□□□□ 0.21
NEDD8-201ENST00000250495 ZNF880Q6PDB4 577 aa16.38■□□□□ 0.21
NEDD8-201ENST00000250495 MOB1BQ7L9L4 216 aa16.38■□□□□ 0.21
NEDD8-201ENST00000250495 CLVS1Q8IUQ0 354 aaPredicted RBP16.38■□□□□ 0.21
NEDD8-201ENST00000250495 MINDY2Q8NBR6 621 aa16.38■□□□□ 0.21
NEDD8-201ENST00000250495 SETD6Q8TBK2 473 aa16.38■□□□□ 0.21
NEDD8-201ENST00000250495 NICN1Q9BSH3 213 aa16.38■□□□□ 0.21
NEDD8-201ENST00000250495 SLC23A1Q9UHI7 598 aa16.38■□□□□ 0.21
NEDD8-201ENST00000250495 ZNF256Q9Y2P7 627 aaPredicted RBP16.38■□□□□ 0.21
NEDD8-201ENST00000250495 TMEM14DPA8MWL7 114 aa16.37■□□□□ 0.21
NEDD8-201ENST00000250495 SLC22A1O15245 554 aa16.37■□□□□ 0.21
NEDD8-201ENST00000250495 NOL3O60936 208 aaKnown RBP16.37■□□□□ 0.21
NEDD8-201ENST00000250495 TMBIM6P55061 237 aa16.37■□□□□ 0.21
NEDD8-201ENST00000250495 UNC119Q13432 240 aa16.37■□□□□ 0.21
NEDD8-201ENST00000250495 MED22Q15528 200 aa16.37■□□□□ 0.21
NEDD8-201ENST00000250495 OR6M1Q8NGM8 313 aa16.37■□□□□ 0.21
NEDD8-201ENST00000250495 FCGR1BQ92637 280 aa16.37■□□□□ 0.21
NEDD8-201ENST00000250495 ISOC1Q96CN7 298 aa16.37■□□□□ 0.21
NEDD8-201ENST00000250495 OR5B12Q96R08 314 aa16.37■□□□□ 0.21
NEDD8-201ENST00000250495 BCL7BQ9BQE9 202 aa16.37■□□□□ 0.21
NEDD8-201ENST00000250495 U3KQK5 164 aa16.37■□□□□ 0.21
NEDD8-201ENST00000250495 SORL1Q92673 2214 aa16.36■□□□□ 0.21
NEDD8-201ENST00000250495 OR5H14A6NHG9 310 aa16.36■□□□□ 0.21
NEDD8-201ENST00000250495 ITGB1BP1O14713 200 aa16.36■□□□□ 0.21
NEDD8-201ENST00000250495 CT45A6P0DMU7 189 aa16.36■□□□□ 0.21
NEDD8-201ENST00000250495 CT45A5P0DMU8 189 aa16.36■□□□□ 0.21
NEDD8-201ENST00000250495 CT45A7P0DMV0 189 aa16.36■□□□□ 0.21
NEDD8-201ENST00000250495 QRFPP83859 136 aa16.36■□□□□ 0.21
NEDD8-201ENST00000250495 TMEM267Q0VDI3 215 aaPredicted RBP16.36■□□□□ 0.21
NEDD8-201ENST00000250495 FAM131AQ6UXB0 335 aa16.36■□□□□ 0.21
NEDD8-201ENST00000250495 URM1Q9BTM9 101 aaKnown RBP16.36■□□□□ 0.21
NEDD8-201ENST00000250495 MGAT4AQ9UM21 535 aa16.36■□□□□ 0.21
NEDD8-201ENST00000250495 TENM3Q9P273 2699 aa16.35■□□□□ 0.21
NEDD8-201ENST00000250495 TRBV6-6A0A0A6YYG2 114 aa16.35■□□□□ 0.21
NEDD8-201ENST00000250495 RRHO14718 337 aa16.35■□□□□ 0.21
NEDD8-201ENST00000250495 RBBP9O75884 186 aa16.35■□□□□ 0.21
NEDD8-201ENST00000250495 GSTP1P09211 210 aaKnown RBP16.35■□□□□ 0.21
NEDD8-201ENST00000250495 UCHL1P09936 223 aa16.35■□□□□ 0.21
NEDD8-201ENST00000250495 GNB1P62873 340 aa16.35■□□□□ 0.21
NEDD8-201ENST00000250495 PLGLAQ15195 96 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms