RNA–Protein interactions for RNA: ENST00000229379.2

COX6A1-201, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COX6A1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-201ENST00000229379 SORL1Q92673 2214 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 SLC17A2O00624 439 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 TXNL1O43396 289 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 IGHG4P01861 327 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 CALRP27797 417 aaKnown RBP12.4□□□□□ -0.42
COX6A1-201ENST00000229379 PSMB8P28062 276 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 PPIFP30405 207 aaKnown RBP12.4□□□□□ -0.42
COX6A1-201ENST00000229379 FOXE3Q13461 319 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 TMEM30BQ3MIR4 351 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 CXorf66Q5JRM2 361 aaPredicted RBP12.4□□□□□ -0.42
COX6A1-201ENST00000229379 STEAP3Q658P3 488 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 FAM89BQ8N5H3 189 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 RNF152Q8N8N0 203 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 OR2AK2Q8NG84 335 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 THRSPQ92748 146 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 CNBD2Q96M20 576 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 PECRQ9BY49 303 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 FBXL15Q9H469 300 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 PLGRKTQ9HBL7 147 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 PARP11Q9NR21 331 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 SLC23A1Q9UHI7 598 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 KCNK7Q9Y2U2 307 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 TPRKBQ9Y3C4 175 aa12.4□□□□□ -0.42
COX6A1-201ENST00000229379 TNCP24821 2201 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 TMEM272A0A1B0GTI8 110 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 SMIM30A4D0T7 59 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 ERICH4A6NGS2 130 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 LDLRAD4O15165 306 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 NBR2O15453 112 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 SOX15O60248 233 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 IGF1P05019 195 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 ARSBP15848 533 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 GNB1P62873 340 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 MLLT11Q13015 90 aaPredicted RBP12.39□□□□□ -0.43
COX6A1-201ENST00000229379 RAB11BQ15907 218 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 C5orf64Q2M2E5 130 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 C2orf76Q3KRA6 126 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 IZUMO2Q6UXV1 221 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 COMMD1Q8N668 190 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 MYOZ3Q8TDC0 251 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 MAFIPQ8WZ33 124 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 PRR25Q96S07 402 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 MGLLQ99685 303 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 AGMATQ9BSE5 352 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 C11orf54Q9H0W9 315 aaPredicted RBP12.39□□□□□ -0.43
COX6A1-201ENST00000229379 RAB9BQ9NP90 201 aa12.39□□□□□ -0.43
COX6A1-201ENST00000229379 EGR2P11161 476 aaPredicted RBP12.38□□□□□ -0.43
COX6A1-201ENST00000229379 VDAC1P21796 283 aa12.38□□□□□ -0.43
COX6A1-201ENST00000229379 CDX1P47902 265 aaPredicted RBP12.38□□□□□ -0.43
COX6A1-201ENST00000229379 HLA-DRB3P79483 266 aa12.38□□□□□ -0.43
COX6A1-201ENST00000229379 KIR2DS1Q14954 304 aa12.38□□□□□ -0.43
COX6A1-201ENST00000229379 PRSS48Q7RTY5 328 aa12.38□□□□□ -0.43
COX6A1-201ENST00000229379 ZNF554Q86TJ5 538 aa12.38□□□□□ -0.43
COX6A1-201ENST00000229379 NR2C2APQ86WQ0 139 aa12.38□□□□□ -0.43
COX6A1-201ENST00000229379 OR8H1Q8NGG4 311 aa12.38□□□□□ -0.43
COX6A1-201ENST00000229379 C5orf30Q96GV9 206 aa12.38□□□□□ -0.43
COX6A1-201ENST00000229379 CLCC1Q96S66 551 aa12.38□□□□□ -0.43
COX6A1-201ENST00000229379 FAM103A1Q9BTL3 118 aaKnown RBP12.38□□□□□ -0.43
COX6A1-201ENST00000229379 OR51J1Q9H342 316 aa12.38□□□□□ -0.43
COX6A1-201ENST00000229379 Q9N2K0 584 aa12.38□□□□□ -0.43
COX6A1-201ENST00000229379 TPSG1Q9NRR2 321 aa12.38□□□□□ -0.43
COX6A1-201ENST00000229379 SCOCQ9UIL1 159 aa12.38□□□□□ -0.43
COX6A1-201ENST00000229379 ELF5Q9UKW6 265 aaPredicted RBP12.38□□□□□ -0.43
COX6A1-201ENST00000229379 A3GALT2U3KPV4 340 aa12.38□□□□□ -0.43
COX6A1-201ENST00000229379 RYR3Q15413 4870 aa12.38□□□□□ -0.43
COX6A1-201ENST00000229379 H0YJW9 148 aa12.37□□□□□ -0.43
COX6A1-201ENST00000229379 NDUFA3O95167 84 aa12.37□□□□□ -0.43
COX6A1-201ENST00000229379 DUS4LO95620 317 aaKnown RBP12.37□□□□□ -0.43
COX6A1-201ENST00000229379 HLA-DRB1P01911 266 aa12.37□□□□□ -0.43
COX6A1-201ENST00000229379 ELANEP08246 267 aa12.37□□□□□ -0.43
COX6A1-201ENST00000229379 CEACAM6P40199 344 aa12.37□□□□□ -0.43
COX6A1-201ENST00000229379 ECSCRQ19T08 205 aa12.37□□□□□ -0.43
COX6A1-201ENST00000229379 C19orf54Q5BKX5 351 aa12.37□□□□□ -0.43
COX6A1-201ENST00000229379 LY6G6FQ5SQ64 297 aa12.37□□□□□ -0.43
COX6A1-201ENST00000229379 ZNF491Q8N8L2 437 aa12.37□□□□□ -0.43
COX6A1-201ENST00000229379 NPBQ8NG41 125 aa12.37□□□□□ -0.43
COX6A1-201ENST00000229379 FAM3DQ96BQ1 224 aa12.37□□□□□ -0.43
COX6A1-201ENST00000229379 ISYNA1Q9NPH2 558 aa12.37□□□□□ -0.43
COX6A1-201ENST00000229379 ABRACLQ9P1F3 81 aa12.37□□□□□ -0.43
COX6A1-201ENST00000229379 DNAH7Q8WXX0 4024 aa12.37□□□□□ -0.43
COX6A1-201ENST00000229379 TRBV6-6A0A0A6YYG2 114 aa12.36□□□□□ -0.43
COX6A1-201ENST00000229379 I3L521 148 aa12.36□□□□□ -0.43
COX6A1-201ENST00000229379 RGS11O94810 467 aa12.36□□□□□ -0.43
COX6A1-201ENST00000229379 IGLV1-40P01703 118 aa12.36□□□□□ -0.43
COX6A1-201ENST00000229379 ZNF383Q8NA42 475 aa12.36□□□□□ -0.43
COX6A1-201ENST00000229379 OR11H1Q8NG94 326 aa12.36□□□□□ -0.43
COX6A1-201ENST00000229379 C4orf3Q8WVX3 66 aa12.36□□□□□ -0.43
COX6A1-201ENST00000229379 STEAP1Q9UHE8 339 aa12.36□□□□□ -0.43
COX6A1-201ENST00000229379 TRAV41A0A0B4J266 112 aa12.35□□□□□ -0.43
COX6A1-201ENST00000229379 RAB29O14966 203 aa12.35□□□□□ -0.43
COX6A1-201ENST00000229379 RRP9O43818 475 aaKnown RBP12.35□□□□□ -0.43
COX6A1-201ENST00000229379 IGKV1-16P04430 117 aa12.35□□□□□ -0.43
COX6A1-201ENST00000229379 FHL3Q13643 280 aa12.35□□□□□ -0.43
COX6A1-201ENST00000229379 IGSF11Q5DX21 431 aa12.35□□□□□ -0.43
COX6A1-201ENST00000229379 LIN54Q6MZP7 749 aa12.35□□□□□ -0.43
COX6A1-201ENST00000229379 OR8U1Q8NH10 309 aa12.35□□□□□ -0.43
COX6A1-201ENST00000229379 CMSS1Q9BQ75 279 aaKnown RBP12.35□□□□□ -0.43
COX6A1-201ENST00000229379 ACOT13Q9NPJ3 140 aa12.35□□□□□ -0.43
COX6A1-201ENST00000229379 ZNF230Q9UIE0 474 aaPredicted RBP12.35□□□□□ -0.43
COX6A1-201ENST00000229379 V9GY05 133 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms