RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 OR8G2PQ6IF36 304 aa14.58□□□□□ -0.08
USB1-201ENST00000219281 MOB1BQ7L9L4 216 aa14.58□□□□□ -0.08
USB1-201ENST00000219281 MRGPRGQ86SM5 289 aa14.58□□□□□ -0.08
USB1-201ENST00000219281 MDP1Q86V88 176 aa14.58□□□□□ -0.08
USB1-201ENST00000219281 DRAM1Q8N682 238 aa14.58□□□□□ -0.08
USB1-201ENST00000219281 RBKSQ9H477 322 aa14.58□□□□□ -0.08
USB1-201ENST00000219281 TNFSF15O95150 251 aa14.58□□□□□ -0.08
USB1-201ENST00000219281 IL18BPO95998 194 aa14.58□□□□□ -0.08
USB1-201ENST00000219281 FGFRL1Q8N441 504 aa14.58□□□□□ -0.08
USB1-201ENST00000219281 SCCPDHQ8NBX0 429 aa14.58□□□□□ -0.08
USB1-201ENST00000219281 TAF15Q92804 592 aaKnown RBP eCLIP14.58□□□□□ -0.08
USB1-201ENST00000219281 PFDN5Q99471 154 aa14.58□□□□□ -0.08
USB1-201ENST00000219281 ELOA3CA0A087WX78 387 aaPredicted RBP14.57□□□□□ -0.08
USB1-201ENST00000219281 ZNF729A6NN14 1252 aaPredicted RBP14.57□□□□□ -0.08
USB1-201ENST00000219281 ZNF737O75373 536 aa14.57□□□□□ -0.08
USB1-201ENST00000219281 SLC38A11Q08AI6 406 aa14.57□□□□□ -0.08
USB1-201ENST00000219281 RTL8AQ9BWD3 113 aa14.57□□□□□ -0.08
USB1-201ENST00000219281 TREM2Q9NZC2 230 aa14.57□□□□□ -0.08
USB1-201ENST00000219281 ASPMQ8IZT6 3477 aa14.57□□□□□ -0.08
USB1-201ENST00000219281 IFNA1P01562 189 aa14.57□□□□□ -0.08
USB1-201ENST00000219281 MDKP21741 143 aaPredicted RBP14.57□□□□□ -0.08
USB1-201ENST00000219281 LINC00469Q8N7U9 141 aa14.57□□□□□ -0.08
USB1-201ENST00000219281 LHX4Q969G2 390 aa14.57□□□□□ -0.08
USB1-201ENST00000219281 PINX1Q96BK5 328 aaKnown RBP14.57□□□□□ -0.08
USB1-201ENST00000219281 SLC39A9Q9NUM3 307 aa14.57□□□□□ -0.08
USB1-201ENST00000219281 CLDN1O95832 211 aa14.56□□□□□ -0.08
USB1-201ENST00000219281 IGKV1D-33P01593 117 aa14.56□□□□□ -0.08
USB1-201ENST00000219281 IGKV1-33P01594 117 aa14.56□□□□□ -0.08
USB1-201ENST00000219281 PGA5P0DJD9 388 aa14.56□□□□□ -0.08
USB1-201ENST00000219281 TLE1Q04724 770 aa14.56□□□□□ -0.08
USB1-201ENST00000219281 ACSF3Q4G176 576 aaPredicted RBP14.56□□□□□ -0.08
USB1-201ENST00000219281 WDR25Q64LD2 544 aaPredicted RBP14.56□□□□□ -0.08
USB1-201ENST00000219281 GP6Q9HCN6 339 aa14.56□□□□□ -0.08
USB1-201ENST00000219281 ABI3Q9P2A4 366 aa14.56□□□□□ -0.08
USB1-201ENST00000219281 LOC400499M0QZD8 3231 aa14.56□□□□□ -0.08
USB1-201ENST00000219281 CDIPTO14735 213 aa14.55□□□□□ -0.08
USB1-201ENST00000219281 PTBP3O95758 552 aaKnown RBP14.55□□□□□ -0.08
USB1-201ENST00000219281 FABP4P15090 132 aa14.55□□□□□ -0.08
USB1-201ENST00000219281 RPP25LQ8N5L8 163 aaKnown RBP14.55□□□□□ -0.08
USB1-201ENST00000219281 BCL2L2Q92843 193 aaPredicted RBP14.55□□□□□ -0.08
USB1-201ENST00000219281 PARD6GQ9BYG4 376 aaPredicted RBP14.55□□□□□ -0.08
USB1-201ENST00000219281 ESPL1Q14674 2120 aa14.55□□□□□ -0.08
USB1-201ENST00000219281 HMGB3O15347 200 aaKnown RBP14.55□□□□□ -0.08
USB1-201ENST00000219281 NXPH2O95156 264 aa14.55□□□□□ -0.08
USB1-201ENST00000219281 OPN1MWP04001 364 aa14.55□□□□□ -0.08
USB1-201ENST00000219281 CD55P08174 381 aa14.55□□□□□ -0.08
USB1-201ENST00000219281 OPN1MW2P0DN77 364 aa14.55□□□□□ -0.08
USB1-201ENST00000219281 OPN1MW3P0DN78 364 aa14.55□□□□□ -0.08
USB1-201ENST00000219281 ERVK11-1P61568 191 aa14.55□□□□□ -0.08
USB1-201ENST00000219281 OR5H1A6NKK0 313 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 PHOX2AO14813 284 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 RAMP3O60896 148 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 CD81P60033 236 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 ERVS71-1P61550 626 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 TNFRSF9Q07011 255 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 ADIRFQ15847 76 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 TMEM14EPQ6UXP3 125 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 MBNL3Q9NUK0 354 aaKnown RBP14.54□□□□□ -0.08
USB1-201ENST00000219281 WIPI2Q9Y4P8 454 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 KMT2EQ8IZD2 1858 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 TRBV24-1A0A075B6N3 115 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 SH2D1BO14796 132 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 GATCO43716 136 aaKnown RBP14.54□□□□□ -0.08
USB1-201ENST00000219281 CELA3BP08861 270 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 CEBPDP49716 269 aaPredicted RBP14.54□□□□□ -0.08
USB1-201ENST00000219281 Q8IYB0 196 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 NANOS1Q8WY41 292 aaKnown RBP14.54□□□□□ -0.08
USB1-201ENST00000219281 SMIM7Q9BQ49 75 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 OR2J1Q9GZK6 312 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 CTDSP1Q9GZU7 261 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 NAT8Q9UHE5 227 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 POLDIP2Q9Y2S7 368 aa14.54□□□□□ -0.08
USB1-201ENST00000219281 EP300Q09472 2414 aaPredicted RBP14.54□□□□□ -0.08
USB1-201ENST00000219281 RNF212BA8MTL3 300 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 TGOLN2O43493 480 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 KRASP01116 189 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 G6PCP35575 357 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 MEOX1P50221 254 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 TRIP6Q15654 476 aaKnown RBP14.53□□□□□ -0.08
USB1-201ENST00000219281 ALKBH6Q3KRA9 238 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 FBXW9Q5XUX1 488 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 FAM53AQ6NSI3 398 aaPredicted RBP14.53□□□□□ -0.08
USB1-201ENST00000219281 ACSM6Q6P461 480 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.53□□□□□ -0.08
USB1-201ENST00000219281 SNX22Q96L94 193 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 PRDM13Q9H4Q3 707 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 CHD3Q12873 2000 aaKnown RBP14.53□□□□□ -0.08
USB1-201ENST00000219281 FAM90A26D6RGX4 464 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 SELEP16581 610 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 ZNF816Q0VGE8 651 aaPredicted RBP14.53□□□□□ -0.08
USB1-201ENST00000219281 TBC1D28Q2M2D7 210 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 ATP1A1-AS1Q5TC04 95 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 NCR3LG1Q68D85 454 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 C16orf82Q7Z2V1 217 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 NECAP1Q8NC96 275 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 OR1L1Q8NH94 360 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 SLC25A22Q9H936 323 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 CLN8Q9UBY8 286 aa14.53□□□□□ -0.08
USB1-201ENST00000219281 DNAJC13O75165 2243 aa14.52□□□□□ -0.08
USB1-201ENST00000219281 GRPP07492 148 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms