RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Vmn1r173E9Q8V7 313 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Vmn2r82G3UWA2 865 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 1700067P10RikG3X8U2 183 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Vmn1r67G5E8C1 305 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Gm21882J3QN86 361 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 GzmbP04187 247 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 LtaP09225 202 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Scd2P13011 358 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Ubl4aP21126 157 aaKnown RBP12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 GdnfP48540 211 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Cd7P50283 210 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Ube2e1P52482 193 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 PitpnaP53810 271 aaKnown RBP12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Pdlim4P70271 330 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 SlpiP97430 131 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Apoc2Q05020 97 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Syce1lQ5D525 247 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Olfr1162Q7TR28 314 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Sox21Q811W0 276 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Slc25a44Q8BGF9 314 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Mob3cQ8BJG4 216 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Fn3krpQ8K274 309 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Vmn1r215Q8R264 300 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Nfam1Q8R4V1 264 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Fcrl1Q8R4Y0 343 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 MynnQ99MD8 610 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Nol3Q9D1X0 220 aa12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Abt1Q9QYL7 269 aaKnown RBP12.64□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Cacna1iE9Q7P2 2199 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Igkv4-50A0A0B4J1J0 117 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Gm42543A0A0G2JET4 117 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Olfr1107A2AVB8 312 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Gm11127A7VMS2 374 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Gm44501A8R0T9 150 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 E030018B13RikJ3QMS9 113 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Cdk2ap1O35207 114 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Srp14P16254 110 aaKnown RBP12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 CebpdQ00322 268 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Rpusd3Q14AI6 344 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Rnf150Q5DTZ6 437 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 B3gnt3Q5JCS9 372 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 IspdQ5RJG7 447 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Bod1Q5SQY2 173 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 ArhgdibQ61599 200 aaKnown RBP12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Hes3Q61657 175 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Ppp3r2Q63811 179 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Tfap2eQ6VUP9 442 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Olfr304Q7TS03 333 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Hyal5Q812F3 526 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Rcc2Q8BK67 520 aaKnown RBP12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Pitpnc1Q8K4R4 332 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Rcc1Q8VE37 421 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Olfr1408Q8VG32 310 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Mrpl15Q9CPR5 295 aaKnown RBP12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Hnrnpa0Q9CX86 305 aaKnown RBP12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Spink12Q9D256 87 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Actrt1Q9D9J3 376 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Slco1a4Q9EP96 670 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Tmem27Q9ESG4 222 aa12.63□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Scgb2b3D2XZ38 112 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Olfr914E9PW59 316 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Olfr69E9Q7C5 316 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Gm21994F6T2D2 329 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Sult2b1O35400 338 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Fcn1O70165 334 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Wnt4P22724 351 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Timp3P39876 211 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 PitpnbP53811 271 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Scn1bP97952 218 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Zfp663Q6NXM6 656 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Wipf2Q6PEV3 440 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Scgb1c1Q7M742 95 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 GldnQ8BMF8 549 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Slc35e4Q8K3D6 351 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Cmtm6Q9CZ69 183 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Fam122cQ9D5J5 180 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Q9DAD0 168 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Ubqln2Q9QZM0 638 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Acox1Q9R0H0 661 aaKnown RBP12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 SpdefQ9WTP3 325 aa12.62□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Iglv3A0A0B4J1K5 122 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Olfr911-ps1A0A140T8K0 311 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Ddi2A2ADY9 399 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 CtcflA2APF3 636 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Olfr373E9Q4J3 314 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Gm8020F6WLE9 229 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Gm20509G3UZF1 325 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Prss39O70169 367 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 RcvrnP34057 202 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Htr2bQ02152 479 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Zfp936Q3ULA8 456 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Zfp85Q7TMC9 473 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Olfr372Q7TRY2 314 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Clic5Q8BXK9 251 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Slc22a22Q8R0S9 554 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Vmn1r62Q8R2C0 300 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Olfr633Q8VF02 312 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Olfr1361Q8VFH0 317 aa12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Adarb1Q91ZS8 711 aaKnown RBP12.61□□□□□ -0.39
Hmgb1-208ENSMUST00000139443 Slc33a1Q99J27 550 aa12.61□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms