RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 DohhQ99LN9 302 aa17.98■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Eef1akmt1Q9CY45 214 aa17.98■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Olfr951Q9EQ94 314 aa17.98■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Klrc3Q9QXN7 221 aa17.98■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Rps2-ps6A0A140T8L5 221 aa17.98■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Gm11127A7VMS2 374 aa17.98■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Bcl6bO88282 474 aa17.98■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Wt1P22561 449 aa17.98■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Ndufb6Q3UIU2 128 aa17.98■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Lax1Q8BHB3 407 aa17.98■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Rwdd2bQ99M03 290 aa17.98■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Q9D1Z2 194 aa17.98■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 AplfQ9D842 499 aa17.98■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 SmpxQ9DC77 85 aa17.98■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Ccnl2Q9JJA7 518 aa17.98■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Gm28961A0A087WPA5 222 aa17.97■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 H1f0P10922 194 aaKnown RBP17.97■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Agtr1aP29754 359 aa17.97■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 PvalbP32848 110 aa17.97■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Cd7P50283 210 aa17.97■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Olfr1507Q0VEP0 313 aa17.97■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Spatc1Q148B6 480 aa17.97■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Olfr453Q7TRV7 317 aa17.97■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Zfp729bQ80VN4 1045 aa17.97■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Wdyhv1Q80WB5 209 aa17.97■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Olfr1453Q8VFX0 307 aa17.97■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Pnpla3Q91WW7 413 aa17.97■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 S100a16Q9D708 124 aa17.97■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Ccdc54Q9DAL3 329 aa17.97■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Fam208bQ5DTT3 2382 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Trav15d-1-dv6d-1A0A075B624 124 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Gm3045A0A1D5RMA1 209 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Gm6665F6Y363 85 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Olfr64F8VPZ8 307 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Gm12258Q5NC63 627 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Klk1b24Q61754 263 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 AgerQ62151 402 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Fbxo27Q6DIA9 280 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Actbl2Q8BFZ3 376 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Gpr137bQ8BNQ3 385 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Plcz1Q8K4D7 647 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Olfr52Q8VFL0 319 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 GhitmQ91VC9 346 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Ctrb1Q9CR35 263 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Ttc32Q9DAC7 148 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Psma1Q9R1P4 263 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Myo9aQ8C170 2542 aa17.96■□□□□ 0.47
Ccdc88a-202ENSMUST00000109477 Arxes1C0HK79 180 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Arxes2C0HK80 180 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Vmn1r124D3YTX4 307 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 H2al1oL7MU04 110 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Mab21l1O70299 359 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 GdnfP48540 211 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Htr2bQ02152 479 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Rtp3Q5QGU6 474 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 AdipoqQ60994 247 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr354Q8VGJ8 317 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Ms4a4dQ99N05 225 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 MmabQ9D273 237 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Fbxw4Q9JMJ2 410 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Sirpb1bA0A0A6YXN8 397 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Ube2ql1A0PJN4 161 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Gm4181E9Q7X3 184 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Gm21788J3QNH3 180 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Sirpb1cK7N6K7 397 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Gm3532M0QWL4 194 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Csf3P09920 208 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 P18526 117 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Gpr83P30731 423 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Foxa2P35583 459 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Prop1P97458 223 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 ArsgQ3TYD4 525 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Mob3aQ8BSU7 217 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Gm16503Q8C6M9 103 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Dmrta1Q8CFG4 490 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Alkbh6Q8K2U2 238 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Vmn1r74Q8R290 304 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Zfp61Q923D1 555 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr961Q9EQ84 314 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr945Q9EQB5 319 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 TpbgQ9Z0L0 426 aa17.95■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Gm21761J3QK00 171 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Foxf2O54743 446 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 CcnkO88874 554 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Wnt2P21552 360 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Ca10P61215 328 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Ascl1Q02067 231 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Zfp948Q6DFU8 667 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Srsf1Q6PDM2 248 aaKnown RBP17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Smim12Q78RX3 92 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Zadh2Q8BGC4 377 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Zfp947Q8BIQ6 437 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Timm21Q8CCM6 249 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Thap7Q8VCZ3 309 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr410Q8VFX7 315 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr402Q8VFX8 315 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr50Q8VGK5 312 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr73Q920P2 313 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Exosc4Q921I9 245 aaKnown RBP17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Dcun1d5Q9CXV9 237 aa17.94■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms